Os09g0265800

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Revision as of 07:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0265800| Description = HGWP repeat containing protein| Version = NM_001069250.1 GI:115478239 GeneID:4346558| Length = 7277 bp| Definition ...")
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Gene Name

Os09g0265800

Description

HGWP repeat containing protein

Version

NM_001069250.1 GI:115478239 GeneID:4346558

Length

7277 bp

Definition

Oryza sativa Japonica Group Os09g0265800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:5538410..5545686

Sequence Coding Region

5538470..5539138

Expression

GEO Profiles:Os09g0265800

Genome Context

<gbrowseImage1> name=NC_008402:5538410..5545686 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:5538410..5545686 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgctgttgggtgtctacaacttcaccaccggcctgcttccgtcgccgccgactggtgtcctcgcctatacggttggttggtcacaccaccgttcatgggcgttcacgtcttcaccgaccagctggccttcgtcgccgccgactggtgttttcgcctgcacggctggtctattaagccgccgctgttgggcgtctacgacttcaccaccggcctgcctccgtcgccgccaactggtgtcctcgcctatacggttggttggtcacaccaccgttcatgggcgtccacgctttcaccgacggctcgcctttgccgccgccgactggtgtctccgcctacatagcctggcctattatgctgccgttgctgggcgtctacgacttcgcagccggcttgtcttcgccgccgccgattggtatctccgcctacacggctggcctattatgccgccattagtgggcatcttcgctttcaccgtcgaccgccttcgtcgccgccgactggtgtcttcattgttattgttggacgactttgttcccacattggccacctctgccatcaccaaggggaatattacaaagctaagtcatcatttattttattctttatatgatatttttccttttcctctgcctcactacaccaattggtcttccattgagtag</cdnaseq>

Protein Sequence

<aaseq>MPPLLGVYNFTTGLLPSPPTGVLAYTVGWSHHRSWAFTSSPTSW PSSPPTGVFACTAGLLSRRCWASTTSPPACLRRRQLVSSPIRLVGHTTVHGRPRFHRR LAFAAADWCLRLHSLAYYAAVAGRLRLRSRLVFAAADWYLRLHGWPIMPPLVGIFAFT VDRLRRRRLVSSLLLLDDFVPTLATSAITKGNITKLSHHLFYSLYDIFPFPLPHYTNW SSIE</aaseq>

Gene Sequence

<dnaseqindica>6549..7217#atggcgctcgcctatccccatcgcgtgcatcgccgttgcattctctccatctcactcaacgcgctcccccgtaccggcgccagcatgttgtccgcctccgtgccgcatgggctccgcttcgtctccccctcctagcgtcggccggttcgccttccccgcccaatcgatacgcccatgcacctagccccgcgatcccctggcattcaaccatcagccacccacattgtctctcgtaaatgcaatccaatccaaatcaattatttcatccagttcgtttccctctcttcaaactgtcgccccatgtcttcactccaagaaaatgcctgcatctaatgcggcagctatagccttcttaaatcaggaggttcttttcttgccgtaagtatttctattgggtcgactctgatctgagtgacggatgccacaggcaatttgtgttcttgtttcctggagtatcttcagtccctggatatatcgatcaaaattgaggagtttctctccgtccgttgctcccgctgctgcagaaacgagtgaatctgttccgaggtaaatttctccaaccaatatgtgcctctgattgataaaatgcctacacatatactgcatttgaggtagacaggtagcatcagccatcaggtgatcttcagcaaacgacttttgaatgagttgtccaatgatgtagcctacggaaccacgttaagccattaaggtaacagatgatgtgagcaatgttatctctccctaaatcagttttcatgcatcattctagggtgggggatatttaccaatagttcctttgcaacataaagcctcaggattataagttttagtctgtatactcctacgttgctactaatatttgatgcaaaatatagtatgattcagcacaacaatttttttctatcgtaatatgtatttatgtgcatctatcaaacttgtgctacatgacaaattaatagctttttattttctgtctgtgtgctatttgactaggtctgaggcaactgttcaattttcaagatgcattttttgcatattacacatggatgcacaattgcacactattcacaaaggtgacaatattttccggcttttacacttattttcgttcatgcttccaataagtgttaagaaaagaaccatatgtactacttcagttgctgtttgattccaaatatttatcatcgaaacaacattctctcccataaaatttttagcctgcagaagcagaactccaatgctaatcttcctaatcttctcatttttaactcatgaaacgtaaacaacctaccaacaggttcttcggtttctccttctaattactatctaaactaaacttatagggccatcatgttctgcctgtccctaacacaacagttggactaccacatctggaaggtcctaaccataccacctcttatttattgccatttttgttggatttacataagaaaatcatcacaaacatagtactcctaaggcacaataatttcttttcttttcatatgtaagttgttacagtttctcataattactataccagtttatttaactattacaatgttccgcagcaacgcggcggagtatcatctagttcagcatacgaaaatgatcaggtaatcagcaattaatgacgtctacacatctaagataagtttttggttcaaatctaaaatgcaaacgtacgttaaaaggattttgtgatcacaaattaaagtcgctcatgtgattttcttaggaaatattggtccacgcattacggagcaaaaatgaacaaacaaattttgctttgatccatacataccagtagctagatctaggaatcctagactactgggacaatctaaagcgtccaattgggggaggctctacctgctacaacttcttccagaatcagaatcctacactactgggacaatctaaagcgtctaattgggggaggctctacctgctacaacttctcccagaatcagaagctcccaaaacagttcagtttttggtctagattttgaaaagctgtatagttgtagaatctagaaaatgaactagaagctagaagctgagaaacccagcttttccatattctcaaaagctgaatatcaactagctagttcttagaattttaagcttcccaaacaggtcctaatcgtacaaatctgtaactcctgttgttccataattcttaacgttttataccatgatacaatttttaaagggaagtccgaattacatccttgaactatttggtaagtacgaattaccgcgctagacccgaaaataagatatttttcaccctcaactatcaatactggataaaaataaatcccccgagcagctttgcaagcgtattgatcctacgtggcagtccagtcagcaattcttttattaaaaataagatgggcccatctgtcagatatctctatgtccctctcaccccctctctctctctcgcgtcagagcccggaggagtcccgcacacctgtggcgtaggcgagacgcgcgctggcggcagcagagatggcggctatgggcgccctctccatcgccccgagctctgcctaccgccgtcctcggctcgctttgcagccctctccaccaacccgagcgccggtggctacgagcagccctcgacgagctgcgcgtcggcaactgctggcctcccgagctccgtggcctcgagctgacctgagtgccggtggctgcgggaatccctttcgccgcccccaacaagtcgcaagtcacatgcctgcgaccatggacgcgccgagttgcatgccgctgctgtccttgaggtgattgagggggaagagagagagagagagagagtagagagagatagagaggtgagggggaagaaagagggtgagagattgataggtggggctcattgattaaaaaaagatcgctgactggtctgccacataggaccacaaccagtccggtttgagtccgggggtaatttatctggctaatagttgagggtgaaagatatatggttttccagtttgagggggtaattcatattgacccaatatctcaagggtgtaattcaggattttccctttataaaatatgtgtttcactatgtatttctattataatatatacaataaataaatacattttactttattatagtattttgcaagacaaatatatatgttgttctagtgcccttaaactgaatatttataaagttatcgatactcaaagatataaaagtttgatctaaaacttgtctaagacatcaaaaattttaaaaccggagagttttaaggtcaaacaacatgacataatttattttacaagagaatatatgatgaaccctgagttccactcgtgacactcaaggctgttgtttggcctgacttttcggtgagttggtgataactatgatttgggagaaacgttgacgatccgactgcaaccgtacgagacgttgtgttgcgccttagcgatcgatacacctctccatgggttattgatcttgccggtgtagataaaccctacttctgcaagcaaataaaagaaacaagcaataacaagataaaagcaatctgatattgcaaataggaatttaatacaaatgataagttggggttccgaagaacaagcagacggacggtctagccgacacgcgcgctgcaagcaagtagcaatggctaaactttaatctatcaaaacccaagaaactgtaaaggggtacgtaactatttataaaggtgtgaggacgaacaagtggactctagggtcatgctccacctggttggggcacaccccacatgggccccacttgggccggtgtcccaaacgaagttacaagcccaaatgcccatgacaggtaacacaacaccttgtttttgtgtttgcggccaaacgagatggagtctggtgatgaggccagatccgttggaaagaggactccgagagctttccatcaagtactcgtgggccaaaaacggaggtcgtatgcagattcggtagccgtttgaagtcagcagtgtagcaggtggccgaatcggattccagcacttgtaggacttgatctcgatatcttcttgttcatctatgatatgagcaatggttccatccgtggtagccatggtcacatcatcctccccttcttcacgaaaaaccgttctcggtttttctatatggtgctctttacgtagtccatttacaacaacctgtttcttcctatcaaaacaaggcaaactagagacaatttggttagcaataacatttctctctaacttgcatattttatccacatgtacaggaagttataaatccgagcagatgtaaaccctatgcaaaaaatatattccaagattattatattcgccaaagatgtgaaatataacattggttggacatggcaaatcatagttagcaaataatttctccttcaaattatcaagctcataaaaatcatcaaagtgaacatagcccaaagtatttaaaaaagatgtcaattcacgttcctctacttcattagcaatgtgaataacatgcttaaaatcatcacgtaaagaaccaacattagaaataggcgttgatataagtgaagtattatcacacaactcttctttatcacaaggaacaacaaacaaatcaacttgtgacaaaggaatctcaacagtttgttccactaagggttgctctactatagcatgaaaagtggacaaatttagttcattaacaacacactcaccttgattaatttcagcaccatttagtttaccttcgatgatctctttagatgatgaaggtgcatcgaattcgagtgtgaacaatgggattagcggctctttcatgtctctttcctcattttcatgattatgcacttcctgcaaatggttagtaataggaggcaaagacatagcgtgcttctttttcatatcctcctctattttactttcagcattgcaagcaagttgtaacaaatgagaaagagatctatatttttcacaagcaagcatgtcctgaatttctttgttatgcccacgtaaaaacctcaattctgtagcttcttcgcattcatctaagccacaacgtaataaacaagcatgaaaatcatgataatatgaagtaacacttttggtattgtcgagattatgggtaccccatacccacacggcatggttatccgactagctataggggataacttatatctatataatatgtaacggatcatgacttgggtattacgtttccctgtatattgtggaacggcctaaagtcctagtttgataagattgtaaagtagatttaggaaaccgataccgtattggttaaggtttctatcttgtaatcctgtcccccatcctatataaggtgggcaggaggccctctaggggcaggagcacatatgatcgtcagatatataatacacccggcggatccaaatccccaaacaggagtagggtattacctctcattgagagggcctgaacctgtctaaatcctttgtctccacatcaatccacttttaggtttcgtgcgctaccccgttttattattgccgaattcgtgtttcgacagttggcacgccaggtaggggtgcgtcgagttttccgtcaaagtacgatggaatcaattttcaggagtcgccggcttcgtcttcgcctatgtagcgtgagatcctctgccgtcgacgccatcttctgatcaaatcaatctacaggaagatatcgggtttgtcgttctaatctatcgtctttagattgaaatctaatcacagattgatgccctggtatttttcttgttttcatgtctcgacgatttggctatccgccgcacgtcggggaaagctatccgctgccaggacgatcgacgggattggccaccgtactgtacatcgccatgatctcgaccaaaccgcacatacatctcgtccctgctggggcttggcgctcgcgtcctcctggccggtttcgaatcacgcgatctgggtcatcgccaataatgacctggccgatgcaaacatgcatttgtgccggacaaatcaaacatatcctgggcttggatggatcgatatttattcgtttgcatgtgcactcaattaattttccggccacgatgtcacgactgcgccatcaccatccatctacagaagcatgcatgcatacccaaatttatacagcatacattgtatatatgctttgtattactaatcaaatcgatttgggtttttacttacatataatcgtcgttggccggctggccgattcttctggctgcttctactgccgccgggaggcctcaccatctcagtgccgattgcttgattagccctagcgacacggtgcaacaccgacgaccaattttctccgtctcggagtcagtcgaagagatcaatctcggcgagttttttccttttaatctccgacttcaccgggttttttccttttcaacttattgttgtttattagattgatctctaaatgtcagattaatctctcttggtattttctgctgtttgcatgtaacgccgcggcactactcttgccgagtggtgttttcgcctgcacggctggcctattatgccgccgctgttgggtgtctacaacttcaccaccggcctgcttccgtcgccgccgactggtgtcctcgcctatacggttggttggtcacaccaccgttcatgggcgttcacgtcttcaccgaccagctggccttcgtcgccgccgactggtgttttcgcctgcacggctggtctattaagccgccgctgttgggcgtctacgacttcaccaccggcctgcctccgtcgccgccaactggtgtcctcgcctatacggttggttggtcacaccaccgttcatgggcgtccacgctttcaccgacggctcgcctttgccgccgccgactggtgtctccgcctacatagcctggcctattatgctgccgttgctgggcgtctacgacttcgcagccggcttgtcttcgccgccgccgattggtatctccgcctacacggctggcctattatgccgccattagtgggcatcttcgctttcaccgtcgaccgccttcgtcgccgccgactggtgtcttcattgttattgttggacgactttgttcccacattggccacctctgccatcaccaaggggaatattacaaagctaagtcatcatttattttattctttatatgatatttttccttttcctctgcctcactacaccaattggtcttccattgagtagtgagtcggggtctacagatgttatatcatattttttataatatttatcttgattgcttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0265800, RefSeq:Os09g0265800