Os03g0748000

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Revision as of 12:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0748000| Description = YT521-B-like protein family protein| Version = NM_001057799.1 GI:115455326 GeneID:4334103| Length = 4109 bp| Defini...")
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Gene Name

Os03g0748000

Description

YT521-B-like protein family protein

Version

NM_001057799.1 GI:115455326 GeneID:4334103

Length

4109 bp

Definition

Oryza sativa Japonica Group Os03g0748000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31540876..31544984

Sequence Coding Region

31541147..31541177,31541408..31541481,31541589..31541748,31541831..31541898,31542127..31542669
,31542921..31543508,31543588..31543800,31544153..31544295,31544419..31544584

Expression

GEO Profiles:Os03g0748000

Genome Context

<gbrowseImage1> name=NC_008396:31540876..31544984 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:31540876..31544984 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgttgctcctggcgctggcgaccaggctactgacatgatgcagaagctgtcgttggagagcaagaaggaaggcgccacccctgacgctaccaagaagcctgccgggatgccctatggatctgcaagcgccggcgatgcgcagaatgcggcgtcgccggtggacaggtcgatcactcccctgctccaggaggccgtgaatgccaacatcttgtatcagaccaatggatatggaccctcagcatattactatcctactggttatgacggctcagccaatgaatgggactccagatatgctgcccatgatggaacggagatgcctcctagtgtttatggtgacatgtatggatatggctatgctccctatggcccatatccttctggttctcctgtcccaactgttgggcatgatggccagtcatacggcgcacagcattaccagtaccctggtcaatattatcagcaaccagctccaaccaatgcaagccatggcgtcaatgctgtcaattctcagtctgagatgccctctgttgctgctcaccaggcacgtgttccggttgaatcagcaaaagctagtgccaatgggactgctaatgggatggcaaatactaacagtagttcattagcacgtaagcaaacccatcaaaatgtatcagtattaaacaatggttcatatggaggagggactttgcaaggtggaccatctgctaacaattatggtcacagtggtcttcattctccagttcagtggtatgatgggccagtctactctaatgggcatcagagatcaaatactaattccacatcttatggttctaactcgtattcagcaaaaaatcagagccagcgcccaactgcaaacctcatgggtatgcatgcacagataccttcgtcgggaatgggtttgacatctcctagttatcataccaggatgtacccagacaacagattatatgggcagtatggtcagtatgggaacgcacttaaaactgggcttggtttcggatcaaatatgtacaactccagaaataatggacggtggggaattgttgatagcaagtacaagcctagaggtcgtgcatcttttggttttggcagtgagaaccaagatggcttcactgagcttaacagaggaccaagatctggaggattcaagcaccaaaaacagtttggaccttctgtcactattgctgtgaagggccaagccctcccctcagtcgggaaacaggagaatagtgccattccagataagggccaattcaaccaggaaggttttccagtaacatacaaagatgcaaagttctttgttatcaaatcttacagtgaggatgatgtgcacaaaagtataaaatacaatgtgtgggcaagcactcctaatggaaacaagaagctggatgctggataccgtgaagcgcaggagaaatccagtgaatgcccagtcttcttgttcttctctgtaaacacaagtggccagtttgttggtgttgctgaaatggttggtcctgttgattttgagaagacagtggattattggcaacaagacaagtggaatgggtgttttccaatcaagtggcatgttgtcaaggatgtacccaacaacatcttgaagcacattacattggataacaacgacaataagcctgtgacaaacagccgtgacacacaagaggttaagcttgagcaaggtcttgaaatgctcaagattttcaaggaccacatcagcaagacatcaatcttggatgattttggtttttacgagaaccggcaaaagctgatgcaggagaagagagctaagcagcaactgcttcaaggacagggctctcttgacaatgcttcacatgaaaaggagaagaatgcaattgatgggaaatccacagctcagaagcaggcattgagcaaggagggcacccctattgtcggcgaaatgctgaacgcctcaaaatctgcagttgaaagcagtgtaacaaatggcaattag</cdnaseq>

Protein Sequence

<aaseq>MAAVAPGAGDQATDMMQKLSLESKKEGATPDATKKPAGMPYGSA SAGDAQNAASPVDRSITPLLQEAVNANILYQTNGYGPSAYYYPTGYDGSANEWDSRYA AHDGTEMPPSVYGDMYGYGYAPYGPYPSGSPVPTVGHDGQSYGAQHYQYPGQYYQQPA PTNASHGVNAVNSQSEMPSVAAHQARVPVESAKASANGTANGMANTNSSSLARKQTHQ NVSVLNNGSYGGGTLQGGPSANNYGHSGLHSPVQWYDGPVYSNGHQRSNTNSTSYGSN SYSAKNQSQRPTANLMGMHAQIPSSGMGLTSPSYHTRMYPDNRLYGQYGQYGNALKTG LGFGSNMYNSRNNGRWGIVDSKYKPRGRASFGFGSENQDGFTELNRGPRSGGFKHQKQ FGPSVTIAVKGQALPSVGKQENSAIPDKGQFNQEGFPVTYKDAKFFVIKSYSEDDVHK SIKYNVWASTPNGNKKLDAGYREAQEKSSECPVFLFFSVNTSGQFVGVAEMVGPVDFE KTVDYWQQDKWNGCFPIKWHVVKDVPNNILKHITLDNNDNKPVTNSRDTQEVKLEQGL EMLKIFKDHISKTSILDDFGFYENRQKLMQEKRAKQQLLQGQGSLDNASHEKEKNAID GKSTAQKQALSKEGTPIVGEMLNASKSAVESSVTNGN</aaseq>

Gene Sequence

<dnaseqindica>272..302#533..606#714..873#956..1023#1252..1794#2046..2633#2713..2925#3278..3420#3544..3709#gtctcctcctcttctcccctcccccctcgcgtctgtggcggctatcttcgtgtccctctccctcctcctccccctctcctagggtttatccaccaccacctatcgcctctacctaccacaagaattttttttaccatctatattccacccctgccttctttgccccccgtacctcctggaattttcgccttcttgggatccaatccgcgaggagggaaagaaggcgggtttagatcgaactgggacggagggaggaggaggaggaggaaccatggcggccgttgctcctggcgctggcgaccgtatcctttttatttttgttttctttgatgtgtttaatctgttttagcagcggggggttgcggtttgtgcggcagttcttcgtaaagatttgaacttctttttttttctggggtgataatttaaacagcctttttttttctttttctcgtgttcgaatcctatggctgtattattgtttagttgctcgcttttgaatcgaagtgtttcttccttgattcgcaagctacagaggctactgacatgatgcagaagctgtcgttggagagcaagaaggaaggcgccacccctgacgctaccaagaaggtagcttttgctggcgattcttgtctgtgatgtgttgcttgtgccatcctttttgtttgtttggaggagaggtagctaaaaattatggtcctttttgtgaattgcagcctgccgggatgccctatggatctgcaagcgccggcgatgcgcagaatgcggcgtcgccggtggacaggtcgatcactcccctgctccaggaggccgtgaatgccaacatcttgtatcagaccaatggatatggaccctcagcatattactatcctactggtacaaacacctagtactttgctggataatcaggtagtctaattaagtgctgattttaatgtttgtgcgttcgtgtatataggttatgacggctcagccaatgaatgggactccagatatgctgcccatgatggaacggagatgcctcctgtaagttaatgcagttatttatagttagttcatcactttgcgataggtattttaaggtgtaatgtgatatcacgagttcacctgtgcctagaggaggctaaggaccaaatatggagatagaaaccgtgggggacatatgttgttaatttggaatttaatgaattgcttgtctactcatgctatgtgttggagataaattaactcgattctgttacaatgatccagcagagtgtttatggtgacatgtatggatatggctatgctccctatggcccatatccttctggttctcctgtcccaactgttgggcatgatggccagtcatacggcgcacagcattaccagtaccctggtcaatattatcagcaaccagctccaaccaatgcaagccatggcgtcaatgctgtcaattctcagtctgagatgccctctgttgctgctcaccaggcacgtgttccggttgaatcagcaaaagctagtgccaatgggactgctaatgggatggcaaatactaacagtagttcattagcacgtaagcaaacccatcaaaatgtatcagtattaaacaatggttcatatggaggagggactttgcaaggtggaccatctgctaacaattatggtcacagtggtcttcattctccagttcagtggtatgatgggccagtctactctaatgggcatcagagatcaaatactaattccacatcttatggttctaactcgtattcagcaaaaaatcagagccagcgcccaactgcaaacctcatggtatgttctaggactgtccaattctccattgcccccctccttcccccactcttcttctttttccatagcttctcaaagcagtatgattgtctcacaattatttttttttctgcttattaaatgcatttacctagtattagattctgcgattactgccttccccttaagttgcacatagcaaaaatgatagtgatgcattatgtggctctcacaaagtacaagtattagcctaaaatatccatttgtttcagggtatgcatgcacagataccttcgtcgggaatgggtttgacatctcctagttatcataccaggatgtacccagacaacagattatatgggcagtatggtcagtatgggaacgcacttaaaactgggcttggtttcggatcaaatatgtacaactccagaaataatggacggtggggaattgttgatagcaagtacaagcctagaggtcgtgcatcttttggttttggcagtgagaaccaagatggcttcactgagcttaacagaggaccaagatctggaggattcaagcaccaaaaacagtttggaccttctgtcactattgctgtgaagggccaagccctcccctcagtcgggaaacaggagaatagtgccattccagataagggccaattcaaccaggaaggttttccagtaacatacaaagatgcaaagttctttgttatcaaatcttacagtgaggatgatgtgcacaaaagtataaaatacaatgtgtgggcaagcactcctaatggaaacaagaagctggatgctggataccgtgaagcgcaggagaaatccagtgaatgcccagtcttcttgttcttctctgtaagtattattattaccacattatgtgatccatttgtccctcatatcactctttattgacattgggcatggaatataggtaaacacaagtggccagtttgttggtgttgctgaaatggttggtcctgttgattttgagaagacagtggattattggcaacaagacaagtggaatgggtgttttccaatcaagtggcatgttgtcaaggatgtacccaacaacatcttgaagcacattacattggataacaacgacaataagcctgtgacaaacagccgtgacacacaagaggtatcctttctcaataacttgccaagttctgttgattgtacaatggtcaattgcaggccacgggccattaagggtactattaatgtctctgttattttagatagttaatttcatcgtcattttcttgagataattcaaatttcttgctgtggaaccagattagtcgttcagtaaatgagaacttaagacatgatatatatcaatttcttcatcatgcttatggtcatgagtggaccttcatgtataagaagctgatgaattttatttttatctattgatatggcatgacaatgtgatgatcctttcagtatgctccatgtgcgttacttaccaagtagatgtaatgcttcaggttaagcttgagcaaggtcttgaaatgctcaagattttcaaggaccacatcagcaagacatcaatcttggatgattttggtttttacgagaaccggcaaaagctgatgcaggagaagagagctaagcagcaactgcttcaaggacaggcaagcattctattcacacatagagccttgtgtggttaaaaaacctgttcagaatgttagcaccactcagagctattggtggtgataggttctgatgcctctgtttttatgcactttgtacagggctctcttgacaatgcttcacatgaaaaggagaagaatgcaattgatgggaaatccacagctcagaagcaggcattgagcaaggagggcacccctattgtcggcgaaatgctgaacgcctcaaaatctgcagttgaaagcagtgtaacaaatggcaattagcgcgatatattttctgcgttaattgccacagccgagcagtcagattgtgcaaattctgaaggttcgcggcgtggctgagcgatagctacttgggttgggacttggcaactaaatttcgtaacagactttctataggcttggtgcctggggagtgggtcagttcttactttgattttagctcgtgtgactggttttttgcgtcgttaggtctcatatattactcttatgacatcgggttttatgtaacccttatcctttttgttttttttagccttttcatctattgttattgttagcgaagcatccaaatttcgataaatctgaacaacagtaaggtagttttccgagttttgcagcactggagaaggtaataagacaagaactctggttttggttggtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0748000, RefSeq:Os03g0748000