Os03g0748700

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Revision as of 12:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0748700| Description = Iron hydrogenase domain containing protein| Version = NM_001057806.1 GI:115455340 GeneID:4334110| Length = 4375 bp| ...")
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Gene Name

Os03g0748700

Description

Iron hydrogenase domain containing protein

Version

NM_001057806.1 GI:115455340 GeneID:4334110

Length

4375 bp

Definition

Oryza sativa Japonica Group Os03g0748700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31573498..31577872

Sequence Coding Region

31573765..31573917,31574309..31574400,31574498..31574624,31574730..31574901,31575154..31575203
,31575289..31575439,31575549..31575675,31576081..31576267,31576441..31576594
,31576681..31576763,31577635..31577769

Expression

GEO Profiles:Os03g0748700

Genome Context

<gbrowseImage1> name=NC_008396:31573498..31577872 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:31573498..31577872 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgtcgtcgtcgtcggcgtcgagcaggttctcgccggcgctgcaggcgtcggatctcaacgacttcatcgccccctcgcaggactgcatcatctccctcaacaagggcccctccgcccgccgccttccgatcaaacaaaaggaaattgcagtgagcacaaatcctccagaggaagcagtcaagatttcactgaaggactgtttggcttgcagtggttgcataacatcagcagaaacagttatgcttgagaagcaaagcttgggtgacttcattactcgcatcaactctgacaaagctgtcatagtatcggtctctccacagtcaagagcatcgctagctgcattctttggtctttctcaatcacaggttttcagaaaactcactgcgctgttcaagtcgatgggcgtaaaggcagtttacgacacaagttccagtcgagatctgtccctaattgaagcatgcagtgaatttgttactcgttatcatcaaaaccagttatctagtggcaaagaagctggaaaaaatcttcccatgctttcatctgcatgcccaggttggatatgctatgcagaaaagactctcggttcatttatcttgccttacatctcagctgtgaagagcccccaacaggccattggtgctgctatcaagcatcatatggttggaaaacttggtctgaagccacatgatgtttatcatgttactgtgatgccctgttatgataaaaaactagaagctgttagggatgattttgttttctcagtggaagataaagatgttacagaggtagattccgtattaaccactggtgaagtgttagatttgatacagtccagatctgttgatttcaagaccctagaggagtctcccatggacagattattaaccaatgttgatgatgacggtcaactatatggggtttctggtggctcagggggttatgcagaaacagtctttcgacatgcggcacatgttctcttcgatagaaaaattgaaggatcagttgatttcagaatcttacgaaattcagattttcgtgaggttacactggaggtggagggcaaacctgttcttaagtttgcactttgttatggattcagaaatctgcagaacattattaggaagattaagatgggaaaatgcgaatatcactttattgaagttatggcatgtccttcaggctgcctgaatgggggaggtcaaataaaacctgccaaaggccagtctgcgaaggatcttatccaactactagaggatgtgtacatccaagatgtatcggtatccaaccccttcgagaaccctattgcgaaaagattatatgatgaatggcttgggcaacctggttcagaaaacgcaaagaagtatctacacacgaagtatcacccagtggtgaaaagcgtggcatcgcagttgcagaattggtga</cdnaseq>

Protein Sequence

<aaseq>MASSSSSASSRFSPALQASDLNDFIAPSQDCIISLNKGPSARRL PIKQKEIAVSTNPPEEAVKISLKDCLACSGCITSAETVMLEKQSLGDFITRINSDKAV IVSVSPQSRASLAAFFGLSQSQVFRKLTALFKSMGVKAVYDTSSSRDLSLIEACSEFV TRYHQNQLSSGKEAGKNLPMLSSACPGWICYAEKTLGSFILPYISAVKSPQQAIGAAI KHHMVGKLGLKPHDVYHVTVMPCYDKKLEAVRDDFVFSVEDKDVTEVDSVLTTGEVLD LIQSRSVDFKTLEESPMDRLLTNVDDDGQLYGVSGGSGGYAETVFRHAAHVLFDRKIE GSVDFRILRNSDFREVTLEVEGKPVLKFALCYGFRNLQNIIRKIKMGKCEYHFIEVMA CPSGCLNGGGQIKPAKGQSAKDLIQLLEDVYIQDVSVSNPFENPIAKRLYDEWLGQPG SENAKKYLHTKYHPVVKSVASQLQNW</aaseq>

Gene Sequence

<dnaseqindica>3956..4108#3473..3564#3249..3375#2972..3143#2670..2719#2434..2584#2198..2324#1606..1792#1279..1432#1110..1192#104..238#cccctctctctccttcaaagcaggagaaaagaagaaaaattgattgctctctcgttccgttccggaggagagagagagagagagagagaggagagcggcggcgatggcgtcgtcgtcgtcgtcggcgtcgagcaggttctcgccggcgctgcaggcgtcggatctcaacgacttcatcgccccctcgcaggactgcatcatctccctcaacaagggcccctccgcccgccgccttccggtgagactcctaccccgcgctcgctgattccctttctgccctaggctggggctggattggagctatgcccggcggcgctgctccggtgttggttggcttgccggtcgcgtggttggtcgctggccgtggaaccgtgcgtcgtaccaaaaaaagtgtgtgtagttttgtgtagccatatgggtgatgcgtggtaatcttagcagcgtactagttcgtctcaccatgcgatgcgggatgattctgtatcgatattggaagattttcgagtgctgtactgctgatgtctagcctgtaggcatcgattgatagagcgtgcagagtagagaggaggaggaaaaggaggcggaattgattttgtccttctgctgttaggttgtttgtgaacgagacgaggggacaaaatggtcttggctaaagacgagccaccattatcgaacactctgaattcttcggagttcgggggtgggatttatggtatcagatgctttttttgctgcatactgtctttcctgctgttcgttttagtcgagagaaatcaaattaaagcctgcagtgagtgaacaacctctccagaggtgttgaagaaaactttttgattagtaatagagaaacatatgaaaccaaaacagaagtccagtatcaggtgttggttgcaaacatgaaagcaacgttcaatcatatatgatttctaactggcacctagttccctaattgtttgttgaatggcagaataaactcaataccagactttgcacctttggtatttacatctctgcacacatttgtacaagtagcttcaaaattagtataactggatgattcgcttcccatccgcataccattcctcatatcttggcacttctgttaacagatcaaacaaaaggaaattgcagtgagcacaaatcctccagaggaagcagtcaagatttcactgaaggactgtttggcttgcaggttttctttactaccttgcactgttcattcaatcagcagcttgtccaaatccaaataatgctgactgtttcattttaatcccatagtggttgcataacatcagcagaaacagttatgcttgagaagcaaagcttgggtgacttcattactcgcatcaactctgacaaagctgtcatagtatcggtctctccacagtcaagagcatcgctagctgcattctttggtctttctcaatcacaggtgattaaatatttttttcagttatctgcttccctgtcaaatctgtccttataaaatgttttgtccgaaatgctagtttatttgaacataaccacgactagagatgcataaaggagtgcatttttatcatgaacgtggtaacaaaagcaggagcttaatacctttatgctcaggttttcagaaaactcactgcgctgttcaagtcgatgggcgtaaaggcagtttacgacacaagttccagtcgagatctgtccctaattgaagcatgcagtgaatttgttactcgttatcatcaaaaccagttatctagtggcaaagaagctggaaaaaatcttcccatgctttcatctgcatgcccaggtaaaattgtttgcagggtactatgtaatttaggtatcatgaattctgtacttccacataatgcttgtactctggtaaaaaatatttgatgtttagaataagattcactcaaacttttaaaattttgaccatcaataatttctcatcgaatgcttagtttaaaaacaaaacaaatgatatacatagatttacctcgaaaagtactatcataatatcataaacttattagattttataaactaattctaatataaaattgattgttggaattttaagttgggcaggatcttgtcctaaatgtccctttttttttttaccgtagggggtagcttattagttgcatcttattttataaacaagagtaagattagtgcacaaatatattcaaacctcttcaacttgcaggttggatatgctatgcagaaaagactctcggttcatttatcttgccttacatctcagctgtgaagagcccccaacaggccattggtgctgctatcaagcatcatatggttggaaaacttggtctgaagtgagcactttgccatagttgatgtaaaggtgttaccttcatattttatatactatagacccttaaatatttggacttacagttgtacatgaatgaatttgttgtgtaggccacatgatgtttatcatgttactgtgatgccctgttatgataaaaaactagaagctgttagggatgattttgttttctcagtggaagataaagatgttacagaggtagattccgtattaaccactggtgaagtgttagatttgatacaggtaactgatttttttcccatgtcctgtcttttgatatgcatttaaaaaactatgagaagcttataccattttcatgcttgtgcagtccagatctgttgatttcaagaccctagaggagtctcccatggacagattgtgagtccctagtgtgcctttagcccctttgggtgaagtcctaatagaattcaagttggaaagtaaaatcagtcattatctgttcaaccgatatttcagatttacaaattttgcattgaatttaatcactccttcaataaaaagtcaatagaataattcatgttgctttggataacatgctgtggtatatcacagttgttttatctgtcatatctggaaactcacatatacttacgttcattgttgatccagattaaccaatgttgatgatgacggtcaactatatggggtttctggtggctcagggggttatgcagaaacagtctttcgacatgcggcacatgttctcttcgatagaaaaattgaaggatcagttgatttcagaatcttacgaaattcagattttcgtgaggttacactggaggtgaattcatcctgcatcatgttggcctgctttcaattctctcttaagcatgattcaagtggccttagattaattttgtataacgtgtgttgtgttaatgcacaggtggagggcaaacctgttcttaagtttgcactttgttatggattcagaaatctgcagaacattattaggaagattaagatgggaaaatgcgaatatcactttattgaagttatggcatgtccttcaggtactcccatttatgatacagtgtggcttgcccgctttaagtaaatggttctgagccataggatcttgattctatgaccttaattgttcgcttgcaggctgcctgaatgggggaggtcaaataaaacctgccaaaggccagtctgcgaaggatcttatccaactactagaggatgtgtacatccaagatgtaagctagcgaaatctctcgctaaatttcatgctgtttgtttggaacttgcttttctatgctatgttatgttgtctcagcattggttggattcttccatgtcaatgtggagtagacctgaagcttcttacttgatgtatcctagtaaaaaaaaacagagagaataatctgacctcacagttcatttatggtgatccatcatgttgctgttaacatgccaatcaagtataactgtgtggtagtatgcaattcatatttaccgatcatcacatgtgcatatgaaatgctagctgtgatgcttctaggatctaattactactgtgcaaatatgttatgtttgctgtatgccagaatttccactaactgtaaagcttatggccttatgtaccaggtatcggtatccaaccccttcgagaaccctattgcgaaaagattatatgatgaatggcttgggcaacctggttcagaaaacgcaaagaagtatctacacacgaagtatcacccagtggtgaaaagcgtggcatcgcagttgcagaattggtgataacacagtggtggaaagcatttcccagtgtgggcagttgcttgtgccatcttggtgccctgcccacactaagcaaacactgaacacacagaaaagaaatacacgtcatcaaagattttgcatgcgggcaaatgaattttgttagattgtaggttttaccagcttttcttggtaatgtttgtatactacctcctcactgggaaacacagatgagattgtaacatgtaaaaacgaagtgaaccaaatagtagttgatctactcagctg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0748700, RefSeq:Os03g0748700