Os03g0749500

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Revision as of 12:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0749500| Description = Similar to Exo-beta-glucanase| Version = NM_001057812.1 GI:115455352 GeneID:4334116| Length = 4826 bp| Definition =...")
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Gene Name

Os03g0749500

Description

Similar to Exo-beta-glucanase

Version

NM_001057812.1 GI:115455352 GeneID:4334116

Length

4826 bp

Definition

Oryza sativa Japonica Group Os03g0749500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31646286..31651111

Sequence Coding Region

31648363..31648582,31648676..31648878,31648969..31649061,31649159..31649304,31649407..31649650
,31649758..31649862,31649970..31650152,31650248..31650934

Expression

GEO Profiles:Os03g0749500

Genome Context

<gbrowseImage1> name=NC_008396:31646286..31651111 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:31646286..31651111 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtgctcgcggcgccggtggtcgccgccgtgctgctgctcacctgggcggcgtacggcgaggcccaatacgtgctgtacaaggacgccaccaagccggtggaggcgcgcgtcaccgacctcctggcgcggatgacgctcgcggagaagatcggccagatgacgcagatcgagcggcaggtcgcgtcgccgcaggtcctcaaggactacttcatcgggagcttgcttagcggcggcgggagcgtgccgaggaagcaggcgacggcggcggagtgggtgagcatggtgagcgacttccagaaggggtcgctctcgacgcggctcggcatcccgatgatctacggcatcgacgccgtgcacggacacaacaacgtctacggcgccaccatcttcccccacaacgtcgcgctcggcgccacaagggatccgaacctggtgaagaggatcggcgccgcgacggcgctggaggtgagggcgaccggcatccagtacgcgttcgcgccgtgcatcgcggtgtgcagggatccgaggtgggggaggtgctacgagagctacagcgaggaccaccgcatcgtgcaagccatgacggagctcatccccggcctgcagggcgacgtcccggccaacttcaccagcggcatgccctacgtcgccggaaagaacaacgtggcggcgtgcgccaagcacttcgtgggcgacggcggcacgcagaatggtgtcaacgaggacaacaccatcatcgaccgccgagggctgatgaccatccacatgccggcgtacctcaacgcgctccagaagggcgtctccaccgtcatgatctcctactcgagctggaacggcatcaagatgcacgccaaccacgacctcgtcacccgctacctcaaggacaggctcaatttcaagggcttcacaatctcggattgggagggaattgacaggatcacaacaccagcaggttcaaactactcctactctgtccaggctggagttcttgccggcattgacatgatcatggtgccgaacaactaccagtcgttcatcagcatcctgaccagccatgtcaacaacggcatcattccgatgagcagaatcgacgacgcagtgactaggattctgcgcgtcaagttcaccatgggactcttcgagaaccccatgcccgattcgagcatggctgatcagctggggaagaaggaacacagagatttggcgagggaggcagtgaggaagtcgctggtgctcctgaagaacggcaagacaagtgacaagccgatgctgccgctgtccaagaaggcgcccaagatcctcgtcgccggcagccacgccgacaacctgggctaccagtgcggcggctggacgatcgagtggcagggcgacaccggccgcatcaccgtcggcatgaccatcctcgacgccgtgaaggcggcggtggacccgtcgacgacggtggtgttcgccgagaaccccgacgccgacttcgtcaagaacggcggcttctcctacgccatcgtggtggtcggcgagcacccgtacacggagaccaagggtgacagcttgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgcagtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgccatggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgctgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggaccagctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcctcaccacccagcctaggacctactag</cdnaseq>

Protein Sequence

<aaseq>MAVLAAPVVAAVLLLTWAAYGEAQYVLYKDATKPVEARVTDLLA RMTLAEKIGQMTQIERQVASPQVLKDYFIGSLLSGGGSVPRKQATAAEWVSMVSDFQK GSLSTRLGIPMIYGIDAVHGHNNVYGATIFPHNVALGATRDPNLVKRIGAATALEVRA TGIQYAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTELIPGLQGDVPANFTSGMPYV AGKNNVAACAKHFVGDGGTQNGVNEDNTIIDRRGLMTIHMPAYLNALQKGVSTVMISY SSWNGIKMHANHDLVTRYLKDRLNFKGFTISDWEGIDRITTPAGSNYSYSVQAGVLAG IDMIMVPNNYQSFISILTSHVNNGIIPMSRIDDAVTRILRVKFTMGLFENPMPDSSMA DQLGKKEHRDLAREAVRKSLVLLKNGKTSDKPMLPLSKKAPKILVAGSHADNLGYQCG GWTIEWQGDTGRITVGMTILDAVKAAVDPSTTVVFAENPDADFVKNGGFSYAIVVVGE HPYTETKGDSLNLTIPDPGPSTVATVCGAAQCATVLISGRPVVVQPFLGAMDALVAAW LPGTEGQGVTDVLFGDYGFTGKLPRTWFKSVDQLPMNYGDAHYDPLFPLGFGLTTQPR TY</aaseq>

Gene Sequence

<dnaseqindica>2078..2297#2391..2593#2684..2776#2874..3019#3122..3365#3473..3577#3685..3867#3963..4649#acccatctcatcatcaccccatacctagccgtttggcccgtttcatcctcctcttcttcttcctcctgccatttcttggcatattgcgagttcttggctgccattttctgggcagtggatcggaggaggagattggggattgggcaagaattatcctggtattgtggatataagatttgcagaggaacagtgggtgggtttgtgctttcgtggtggtgggtgagtgaggcgtcgctttccggcgaggttcgtacgtgtggagtctcgcggccgcgcccgtcgccgtcagtcctcgccacgcaaccgcgccgtcgcttctaaactccggtaagtaatcgcctcatcggcaaggcaccgtcaccaccgcgctcgacgggtggtttttatactcttctccctctctttctttggtggtagatgtagctaggtctcctctctgccgccattgccggcctcgtgttcgtccgttccctcacgctctgtctctgtctctgcatcgtcctcctcctcccatggagatcaagaagctgcagcagagagtgagtttttttgcgtcatttgtgtgcttgcttgattgacggcatggcacggttttcacagtttcacatttgctctggtcgccgtcgtcgtcttcctcgagtaaactgtagtaaactcttgtagagggagggttcacgtgagttcggtaactcacgcgcagctttttttgctctttctctcgctttctgtctcatgccgttgttttcgccgtggcggaagccaacaattccgccgcactgtcgagaggaggaagaagatgatatttttcggcgggaggattggaccgcattgtggcggccttcatgaggccatgcctctccatagcccttgctgctccaaccactcctcgatccttatctcatttcctggctttattatataaagaagccatcgccgggagacggagtacaagagagcaggaagcacgcctcttcttcttcttctccatcttctcacccaccatagccaccttcttccttcctgcaactcggctttctggtaagaccaagagaccatccttccacccatggaggtttctttctccctaatagtagtaattagtaaataaactacagtagtaacgcacacgcacacgcggtgaacactgcactgcttggcgtttactgcgtgtcagggctcgccgtctatctagccgttgctcatgcatacagtgagctttaggaaggcaaaaatggtggctttgggtttggggtttgggtgtggggcgagagattccagtcggttgcaacaaacgcattgaatttgcttgccttttctctcatgggaattgtgcagtgcaagaacagagaaatgcagctgtgctgaactgctgctgatataagcttggctccttcctcttcttgcaaaggctccacaatttgcagcagtgcaaattcgcaactgcaagaggagcactctgcttctgcttctggtgatttgtttgccttcatggatggcatagcttatttctgttttgcttggttattcataccaaacttcagtttttgtgttagtttgcaaagtaaaattttagttcttgttactgtttgagaatttagacaccttgccaaatgtttttggtactatttttttcaagtacaaaagcacagcaactctacagtagagtggccagttaatctctttgttaggagtaaatcattctgttaaaatgtccattagagaatgctaataaactattgttaacatctgctagagatctgcaatgacagtggaaaaacagtgtctttttctttcacagttgcgaataaattaaaaatagctctgatgattttgacccagtagtttgttaggacgtcatggtttcctcttgccgcgtttcctctctgcattcttggctcctctcgccgttgaccgaccgcccgcaatggccggcaacggcggcggcggcggcggccggagacactgctccggcgttctcgagtcgctggagggttgcttcacggggtttctcatcgtgctcctggaatggcacgcgcaggtccggaggcggctgctcccgctccttcgccggcagaggatggcggtgctcgcggcgccggtggtcgccgccgtgctgctgctcacctgggcggcgtacggcgaggcccaatacgtgctgtacaaggacgccaccaagccggtggaggcgcgcgtcaccgacctcctggcgcggatgacgctcgcggagaagatcggccagatgacgcagatcgagcggcaggtcgcgtcgccgcaggtcctcaaggactacttcatcggtgagcattgttcttcttcagagacacagccgtcggccatggcggcggcggcggcggcgagctgaggtgtttgttttgcgggtggcgtggcagggagcttgcttagcggcggcgggagcgtgccgaggaagcaggcgacggcggcggagtgggtgagcatggtgagcgacttccagaaggggtcgctctcgacgcggctcggcatcccgatgatctacggcatcgacgccgtgcacggacacaacaacgtctacggcgccaccatcttcccccacaacgtcgcgctcggcgccacaaggcaagcagctctcctctccccaagatttgcaaagctgcttccatttttcactaaccgagagatccggttttgtttgatgtttttgagcagggatccgaacctggtgaagaggatcggcgccgcgacggcgctggaggtgagggcgaccggcatccagtacgcgttcgcgccgtgcatcgcggtaggtcaccaccagccacagtgctagctttgcttcaactctcattggcgatggatcgggggatctcatggcgttgacgttgatcaaacaacaacaggtgtgcagggatccgaggtgggggaggtgctacgagagctacagcgaggaccaccgcatcgtgcaagccatgacggagctcatccccggcctgcagggcgacgtcccggccaacttcaccagcggcatgccctacgtcgccggaaagtaagtcctattcaagaacacctcgtgacacacagtgccactcaagtgtctctttgtgtgttcgtccgcctgatgaacgctgggtgttcgacgaaatgccaggaacaacgtggcggcgtgcgccaagcacttcgtgggcgacggcggcacgcagaatggtgtcaacgaggacaacaccatcatcgaccgccgagggctgatgaccatccacatgccggcgtacctcaacgcgctccagaagggcgtctccaccgtcatgatctcctactcgagctggaacggcatcaagatgcacgccaaccacgacctcgtcacccgctacctcaaggacaggctcaatttcaaggtgagacatcaacccaaaccacttgtttcagattctcattgatgtgataatgtagtttttcagatgttcatcatcttgagttttgtttgtgtttgtgttgctttcagggcttcacaatctcggattgggagggaattgacaggatcacaacaccagcaggttcaaactactcctactctgtccaggctggagttcttgccggcattgacatggtgagaacacaaactttcttgtcactcttagtacaagtgtgcttgctgttttagattcaagcgtatttgatttcaagatgattaattaattgtgatgttacttgtagatcatggtgccgaacaactaccagtcgttcatcagcatcctgaccagccatgtcaacaacggcatcattccgatgagcagaatcgacgacgcagtgactaggattctgcgcgtcaagttcaccatgggactcttcgagaaccccatgcccgattcgagcatggctgatcagctggggaagaaggtaactagtgacacaatctgatgcaatcaaatcataatgttgcttcaatttatttcaggagattattgacggtgaattgtgaatttgtgatccaggaacacagagatttggcgagggaggcagtgaggaagtcgctggtgctcctgaagaacggcaagacaagtgacaagccgatgctgccgctgtccaagaaggcgcccaagatcctcgtcgccggcagccacgccgacaacctgggctaccagtgcggcggctggacgatcgagtggcagggcgacaccggccgcatcaccgtcggcatgaccatcctcgacgccgtgaaggcggcggtggacccgtcgacgacggtggtgttcgccgagaaccccgacgccgacttcgtcaagaacggcggcttctcctacgccatcgtggtggtcggcgagcacccgtacacggagaccaagggtgacagcttgaacctgaccatcccggaccccgggccgagcacggtggcgacggtatgcggcgccgcgcagtgcgccacggtgctcatcagcggccggccggtggtggtgcagccgttcttgggcgccatggacgcgctcgtcgccgcgtggctgccggggaccgaggggcagggcgtcaccgacgtgctgttcggcgactacgggttcaccggcaagctgccgcggacgtggttcaagtcggtggaccagctgccgatgaactacggcgacgcgcactacgacccgctgttcccgctcggattcggcctcaccacccagcctaggacctactagctagcttagctgcagtgataaggagatataggaaagatgaaaatttcactaaatgggaattcgtactccctgccattgtttcccttgatactatttttctctgttttggtgtatgctcgatcctcattggcgagcataatgaggatcaatttgattatgagaaattccatttacacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0749500, RefSeq:Os03g0749500