Os03g0750800

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Revision as of 12:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0750800| Description = Similar to Transcriptional adaptor (Fragment)| Version = NM_001057822.1 GI:115455372 GeneID:4334126| Length = 7322 b...")
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Gene Name

Os03g0750800

Description

Similar to Transcriptional adaptor (Fragment)

Version

NM_001057822.1 GI:115455372 GeneID:4334126

Length

7322 bp

Definition

Oryza sativa Japonica Group Os03g0750800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31698818..31706139

Sequence Coding Region

31699206..31699412,31699532..31699846,31700694..31700904,31701205..31701427,31701907..31701972
,31702092..31702150,31702232..31702289,31704787..31704862,31704960..31705085
,31705164..31705229,31705492..31705735,31705835..31705887

Expression

GEO Profiles:Os03g0750800

Genome Context

<gbrowseImage1> name=NC_008396:31698818..31706139 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:31698818..31706139 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggccggtctcgcggggtgcccaattccggcgacgatgaaacgaaccacaggtcgaagcggaggagggtcgcgtcgagcggcgatgcgccggactcgctctcggcggcctgcgggggagccggagagggtggtgggaagaaggcgctgtaccactgcaactactgcaataaggatatttccgggaagatccggatcaagtgctccaagtgccccgacttcgacctctgcgtcgagtgcttctcggtcggcgccgaggtcaccccgcaccgcagcaaccatccttacagggtcatggacaacctgtctttccctcttatttgtccagattggaatgcagacgaggaaatccttcttctagagggaattgaaatgtatggtctgggaaattgggctgaagttgcggagcatgttggcaccaagaccaaggcacaatgcattgatcattatacaactgcatacatgaactcaccttgttatccccttccggatatgtctcatgttaacggtaagaacaggaaggaattgcttgctatggctaaagtacaaggcgagagtaaaaaagtgttaccaggggatttgacccctaaggacgagtctccattttctcccccaagggtcaaggtggaagatgcacttggagaaggtttagctggtcgatcaccttcacacatagctgggggtgcaaataagaaagcatcaaatgttggacaattcaaagatggtgctaatgtagcaaaagttgaagatggtcatgtggatagaagtataggtgtgaaaaaaccccgatattctgcagatgaagggccttctttgactgaactgagtggatacaattcaaagagacatgaatttgacccagagtatgataacgatgctgaacaggcactcgctgagatggagtttaaagaaactgattcggaaactgatcgtgaactgaagctaagggtattgcgtatttacttgtcaaggcttgatgaaagaaaaaggagaaaagagttcatactggaaagaaacttactatttcctaatcctttggagaaggatctcacaaatgaagacaaggaagtttaccatcgctataaggtgttcatgcgtttcctttctaaggaggaacatgaagcacttgttaggagtgttcttgaggaacggaaaattcgaaggaggattcaagagcttcaggaatgtcgttctgctggatgccgtacattggctgaagcaaagattcacatagagcaaaagaggaaaaaggaacatgaggtgaatgcccaaaaagctaaggaaagtggtcagctcttatccaacactaaagtggtgcataagacgaatcgacctatgaaaatcgagtcagatggtaatttggatcagaagaaaggtggtgccagcttggattctactggcagggattctccaaaaaccacagggcatgcaggcactaaacattgggatgactgggatattgttggttttcctggggcagagctattaagcaccagtgaaaaaaatctatgctgtcagaacagattgctacccaaccattacctgaaaatgcaggaggttttgatgcaggaaatattcaagggtagtgtcgccaagaaggaagatgcccatgtattatttaaggttgaccctgccaaagtagataacgtttatgatatggtgacgaaaaagttgggtaccaatgaggaggccccgactgtttag</cdnaseq>

Protein Sequence

<aaseq>MGRSRGVPNSGDDETNHRSKRRRVASSGDAPDSLSAACGGAGEG GGKKALYHCNYCNKDISGKIRIKCSKCPDFDLCVECFSVGAEVTPHRSNHPYRVMDNL SFPLICPDWNADEEILLLEGIEMYGLGNWAEVAEHVGTKTKAQCIDHYTTAYMNSPCY PLPDMSHVNGKNRKELLAMAKVQGESKKVLPGDLTPKDESPFSPPRVKVEDALGEGLA GRSPSHIAGGANKKASNVGQFKDGANVAKVEDGHVDRSIGVKKPRYSADEGPSLTELS GYNSKRHEFDPEYDNDAEQALAEMEFKETDSETDRELKLRVLRIYLSRLDERKRRKEF ILERNLLFPNPLEKDLTNEDKEVYHRYKVFMRFLSKEEHEALVRSVLEERKIRRRIQE LQECRSAGCRTLAEAKIHIEQKRKKEHEVNAQKAKESGQLLSNTKVVHKTNRPMKIES DGNLDQKKGGASLDSTGRDSPKTTGHAGTKHWDDWDIVGFPGAELLSTSEKNLCCQNR LLPNHYLKMQEVLMQEIFKGSVAKKEDAHVLFKVDPAKVDNVYDMVTKKLGTNEEAPT V</aaseq>

Gene Sequence

<dnaseqindica>6728..6934#6294..6608#5236..5446#4713..4935#4168..4233#3990..4048#3851..3908#1278..1353#1055..1180#911..976#405..648#253..305#gcgatctgcgatggtcgtctcgtccgcgacaccccggccccaattccaacacgcgtgcccagcagccgcagatctctctccaaattccccaatccaaatccgccctcgcctcgccccgatcgatcccctcgattcgattcgatcccgcccgatgcgagtggaggcggcggcggcggcggcggaggccgtggcggcgtgcgcgcgagcttagggtttctagggtttgcgctagggtttgggggcgcgcccgcgatgggccggtctcgcggggtgcccaattccggcgacgatgaaacgaaccacaggtttgtttctagcagctgcttccccccgctttgcatttttcgctctggttgatgtggaggggagtgatccattcgttgtctggttggggtttgctgcaggtcgaagcggaggagggtcgcgtcgagcggcgatgcgccggactcgctctcggcggcctgcgggggagccggagagggtggtgggaagaaggcgctgtaccactgcaactactgcaataaggatatttccgggaagatccggatcaagtgctccaagtgccccgacttcgacctctgcgtcgagtgcttctcggtcggcgccgaggtcaccccgcaccgcagcaaccatccttacagggtcatggtcagtgcagcttcagttcacttcacttctagctccaagtcttaatgcaacgatgtagatatactttacttccttttttgttagcttcaggtgtctttgcttgggtgttatcctttattactatactaatcagctagtgctctgtaattcttacataattggatagcctaaaatagtagtgaagcttacagttgaaatatttttcactttggtgcttgccattcctgatgcatggtttatgttgtatgtgattttgcaccaggacaacctgtctttccctcttatttgtccagattggaatgcagacgaggaaatccttcttctagaggtacatttttctttcatttgctttatttactttctggctgttgggttttgactgtttacttgttataattaataaaagggaattgaaatgtatggtctgggaaattgggctgaagttgcggagcatgttggcaccaagaccaaggcacaatgcattgatcattatacaactgcatacatgaactcaccttgttatccccttccggtaattattttctcaaactgttaatttgtttagttcaactggtagtcgtctggtactccttaattcaatatactgtctcgtgatctcatcattgtaggatatgtctcatgttaacggtaagaacaggaaggaattgcttgctatggctaaagtacaaggcgagagtaaaaaaggtgagttgctatcatacttttcagttaatgtaaacagtcttttaacctgcaagttgtcaaatattctactttttgtttaacatttgaagatttcacactgatgggataacaaaaaacacatggtgttgtgtggtttagttttcttaacatgctaacatactacttgctaatcgccatacataatgtggttcagtggtttagccttttgtttagtatttgattgcgcacctatggtcctcatggatatatcagtatgttcggtaccctgatttttcaacatttaatatccaaaatatgaagggcaatattaaaacataaaatatagggtgctagttagtgaatgtagggtgctagttagtgagtgatctatgtcatgttctttacctggtgaattggcagcagcacaatactttcaattggatgtaagatccatttgggcttttgtttggatgtaagatctcacatccaaacaaaagctcggatctgatatctgtggatccaacagacacatagatcctaccctacatgcttttggcctatccacctgcatgacatacttccttcactgatttattgctattcccatcagaagcagctgggctgccaccacagcgtaccacagcgtgtaactgtagtactgtatacaaagaaacaaagactaggtatagatgtacaggttaataatcaaagggataagtccattttacccccctcaacttttcatgtagtctaaaacacacccactaacttgaaaaccgggtacataaccccctctaacttttaaaaccatgcaaaggaacccctcatgcaaacttaagtggatttcatctgatgtggcagtccaatcaacccaagaaaacaaataaaaaatcgatcagtgctcttgctctctctgtccatacgggattaccacgatgagcggcggagtgaggcagtgagctagagcgagggccatgagatagtgctgacggtgctggatgccgatagtgccgaggccgagctccgcgtccttccacctccgtcctccgctggtcgccagcacacggcgctgccccgagacagatctgggcacgcatggagcaggcgacgacgaggcagagctcaacctcgacatcaccggagctcgagcttgcgcttgcggcgcatggatgagaaggcgcttggggaggcggcagagggaaggagggaggttgaactagctgacggatggaggaggcgctccgggagccagagcttgagcttccctgtaagatcggcatcagcggtgagctcgatctccccctccccgtcacccttgcgagaaccggcgaggtcgagctccctttcaccctttcaagagccggtaagctccatacccccttcctcatcgtcgccccctcatccgcccctcctacaccgaccgccaacgagcacaagctcaagatccgcctcctctgctgcctctagagctcgatcttctccatgaaatcgtaccagcgagctcgagctcaagctcccccttcccgagcgactcctcttcagagccgacgcgtcacaccagcttgctggtggacctcgagctacttggggacgccgagttcatcaaaggcgacgaggcttggggatgaggaactcgagctcgacgaggtgccagcgcttgccgtagcatctccctagcatgcgtgcacatgaggagggagctcgtcggccatggctagagggaggatgccggggatggagggagggagctcatcgctgcttccgctccttagggagctcatccaaagagaggaggaagaagaagaggactggtgggaccctatgttgacgtggcgtccaaaatcgtccaaaaccagtctaaaaccgctatatgatgtaaaatgtacggttttactagttggagggtgtattatggccggttttgtagttcgaggtgtattttagacaaacataagagttcgagggtgtaaaatggacttttcccataatcaaataacagaaccttgcactgtatgatgactccaaactgtagggggaatccatcatttgtcactgcaaagattgccacacttggattagtccctgcttgtgtcatcatagtgttccaatcttagcaagggcacccctgtgacatcctggcccaattaggatgaggcctgtgtggcccatgtgaactgtgtgcgcatgtttagtaccaccttgctagtctagcaagggtggaaccaacttataaggcctcatccctccaaccatacgactcccgggttaacccttttacacaaagcgaggacggaagtgtaagtggggtggtatgtgtaagtgggcccgcccgtcggttgggctggctacgcggttctggagggagggctgttacaacccccctctgaatatggatttctaattggtaattgctgccttgtgtaataattcaaatatgaaaagcagaaaaggagataatatttcactatattggctagtatttatacatgaccttttattatttgtataggaacttcagtgttaccaggggatttgacccctaaggacgagtctccattttctcccccaagggtcaagtatgctgttcttgctttacacttgctggcattactctgaaatttgcaataggttgtttaccaactttttaacttgcatagggtggaagatgcacttggagaaggtttagctggtcgatcaccttcacacatagctgggggtacgtctcattgacatgacaaccttgaacaattaaattctgaaacaatatatctttatatttgtatattttatggaaatgcgctatcacattatgctgatgctgttgaatctgtccaggtgcaaataagaaagcatcaaatgttggacaattcaaagatggtgctaatgtagcaaaagttgaaggtataatcctaactgaacacaacagtcttattttgcattctacacatatcattcagcgttgcactggtgtctataaaacattacttacatttatcgttaattcgttataaccagtcatgggtgaccagatcaaacttaaacggaacaattcttggcatggactccgaagctctcaaatttcaacctttaggatatgtctaatcatgcttgtcacattcttaggaatggaactacaaaaaataacagcaccaaaattatgtttgccagaattttatactggcagcaaaatgaactaaagttacttttttatttatttatgtggggtgtgaagtgtttgtgggaaactcattttctttactgtgtttgtgggaaactcattttctttaccgtatcgaagtatacaccacgcatcctgaacttttcatgtttatgtacatctgtttactttaatattgccttgtttaacttgcatgtcgcagatggtcatgtggatagaagtataggtgtgaaaaaaccccgatattctgcagatgaagggccttctttgactgaactgagtggatacaattcaaagagacatgaatttgacccagagtatgataacgatgctgaacaggcactcgctgagatggagtttaaagaaactgattcggaaactgatcgtgaactgaagctaagggtattgcgtatttacttgtcaaggttggttaacagtgctgatgcaattattttaactgtattattgcagtaacttcattatggagattaagaagatcagcatctttttctgttcatcttagttattatgatgaaagccttttccattgctttagtttctaactaaatcagtacatatcttcgctttttttggtgatttgctaaatgcctgtcactgaattttctgataatccaaatatcctacttgaagttatgtctatctcacacagccatattatgcgttttggtccataaagagaattcatttctttgttgcatttgtaggcttgatgaaagaaaaaggagaaaagagttcatactggaaagaaacttactatttcctaatcctttggagaaggatctcacaaatgaagacaaggaagtttaccatcgctataaggtgttcatgcgtttcctttctaaggaggaacatgaagcacttgttaggagtgttcttgaggaacggaaaattcgaaggaggattcaagagcttcaggtatttatttattttattaaattcaggtatttaatttgtactgtactttatgctgtcatatctttttctttcatttcttataaagttatacattactgcaagaactattctattacgtgttgactctgtatatgctataatgctatatgaagctgggaaagatggattacttatttagttaacaagcaaaggaattacctcaataaatttaatggcctgtaaatctctgttttaccccttaagaacaaatctttctgctaattattttgttacatgatagccagctttacactgcgtcggacaataggataataacatgatggtgcaatttctttattttaaacacaacaaaagaaaaacatggtgtaggttatgaaataggttaagggcgtgttcaaacctaatggttcgtaactcatttcccctgcgcagaaaacgaggttactcattactgcatgattaattaagtattagttacaaaaacctgaaaatggattaatatgattttttttaaaaaagtaactttcgttttgaatttttgttttgcaaaaaagcaccgtttagcagtttgggaagcgtgcgcacagaaaatgagggaatagaagatgagaaccggtagttcacaacgcagccaagtcttctaaagcatgcagtcctgcatacagtattttgttctttctttgttcagtatcatgccatttggatttggtatggattggtaacataacatgttctttactgatcacacgagtaactcttgttggttgattttctgattctcccttcattgatctggttgcattatgttctgatgcacaagaggttgttttgcttctatgatgtccaggaatgtcgttctgctggatgccgtacattggctgaagcaaagattcacatagagcaaaagaggaaaaaggaacatgaggtgaatgcccaaaaagctaaggaaagtggtcagctcttatccaacactaaagtggtgcataagacgaatcgacctatgaaaatcgagtcagatggtaatttggatcagaagaaaggtggtgccagcttggattctactggcagggattctccaaaaaccacagggcatgcaggcactaaacattgggatgactgggatattgttggttttcctggggcagagctattaagcaccagtgtaagtatatttcaaatttcaatgttctaacattttacatttatttgtgcatattttatcttgtcattgccttgttcatactccctacagtaaataaatgatccatttttcaatttcaggaaaaaaatctatgctgtcagaacagattgctacccaaccattacctgaaaatgcaggaggttttgatgcaggaaatattcaagggtagtgtcgccaagaaggaagatgcccatgtattatttaaggttgaccctgccaaagtagataacgtttatgatatggtgacgaaaaagttgggtaccaatgaggaggccccgactgtttagccatgtttttgagttcctcaatcagcgcgtggtttctgatttgcagcatgactactgagacagctaaaatggaggctatacttgaattaaattggctgtagttgaaatttgtgtgaggtgtctgaagaagcacaataaggcatttcagccaaattgtaaaattatcgccccgattggaatgtgtagcatgagtttaccataccattactctccattttaagaggatggtttgccctcgttcgaagtgtaacgtgtaacgtgttgcagagccactaaaagggccttgacagtatagtgcctgaaatgatgtatgtaaacattgccacctttttcatatgtgacatcgttccgataccagacgctatttaattgttgtatttcactgcct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0750800, RefSeq:Os03g0750800