Os03g0751100

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Revision as of 12:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0751100| Description = Similar to Isp4 protein-like| Version = NM_001057825.1 GI:115455378 GeneID:4334129| Length = 3966 bp| Definition = ...")
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Gene Name

Os03g0751100

Description

Similar to Isp4 protein-like

Version

NM_001057825.1 GI:115455378 GeneID:4334129

Length

3966 bp

Definition

Oryza sativa Japonica Group Os03g0751100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:31722902..31726867

Sequence Coding Region

31723177..31723974,31724073..31724925,31725019..31725116,31726193..31726717

Expression

GEO Profiles:Os03g0751100

Genome Context

<gbrowseImage1> name=NC_008396:31722902..31726867 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:31722902..31726867 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgttgaagtcgccggtggcggcggaggagcaggcggcgacggcggcggcggcggcggcgaagggggaaggggagaggtgcccggtggaggaggtggcgctggtggtgccggagaccgacgacccgacgacgccggtgatgacattccgggcgtggacgctggggctcgcgtcctgcgtcgtgctcatcttcctcaacaccttcttcacctaccgcacgcagccgctcaccatctcggggatcctggcccagatcctggtgctccccgcggggcagttcatggccgccgtgctgcccagccgcgaggtgcgcctcctcggcggccgcctcggcagcttcaacctcaacccggggcccttcaacatcaaggagcacgtcatcatcaccatcttcgccaactgcggcgtctcctatggcggcggcgacgcctactccatcggcgccatcaccgtcatgaaggcctactacaagcagtccctcagcttcctctgcgccctcctcatcgtcctcaccacacagatactgggctatggttgggccgggatgctgaggaggtacctggttgacccggctgacatgtggtggccatcgaatttagcccaggtctcactcttcagggcgttgcacgagaaggagggcggcgatggcgggaaggggtcgtcgtcgagggggcctacacggatgcgcttcttcctcatcttcttcttcgcgagcttcgcctactacgcgctgccgggctacctgctccccatcctgaccttcttctcgtgggcgtgctgggcgtggccgcacagcatcacggcgcagcaggtgggctccggctaccacggcctcggcgtcggcgccttcacactggactgggccggcatctcggcgtaccacgggagcccgctggtggcgccgtggtcgtccatcgccaacaccgccgcgggcttcgtcatgttcatctacctcatcgtgccgctctgctactggaagttcgacacgttcgacgcgaggaagttcccaatcttctccaaccagctgttcacggcgtccgggcagaagtacgacaccaccaaggtgctcacgagggagttcgacctcaacgtggcggcgtacgagagctacgggaagctgtacctgagcccgctgttcgccatctccatcgggtccgggttcctgaggttcacggcgacgatcgtgcacgtggcgctgttccacggcggggacatctggaggcagagcaggtcggcgatgagctccgcggcggcgaagatggacgtgcacgcgaagctgatgcggcggtacaagcaggtgccgcagtggtggttcctcgtgctgctcgtcggcagcgtcgccgtgtcgctggtcatgtcgttcgtgtacagggaggaggtgcagctgccgtggtgggggatgctcttcgccttcgccctcgccttcgtcgtcaccctccccatcggcgtcatccaggccaccaccaaccagcaaccggggtacgacatcatcgcgcagttcatgatcgggtacgcgctgccggggaagccgatcgcgaacctgctgttcaagatctacgggaggatcagcacggtgcacgcgctgtcgttcctcgcggacctcaagctggggcactacatgaagatcccgccgcggtgcatgtacacggcgcagctggtgggcacggtggtcgccggcgtggtgaacctggcggtggcgtggtggatgctgggcagcatcgacaacatctgcgacgtggaggcgctgcacccggacagcccgtggacgtgccccaagtaccgggtcacgttcgacgcgtcggtgatctgggggctcatcggccccgcccggctgttcggccgccacggcctgtaccgcaacctggtgtggctgttcctcgccggcgccgtgctgcccgtgccggtgtggctgctcagcagggcgttcccggagaagaagtggatcgcgctcatcaacgtccccgtcatctcctacgggttcgccgggatgccgccggcgacgccgaccaacatcgcgagctggctcgtcacgggcaccatcttcaactacttcgtgttcaagtaccgcaaggggtggtggcagaagtacaactacgtgctgtcggcggcgctcgacgccggcacggccttcatgggggtgctcatcttcttcgccctgcagaacgcccaccatgagctcaagtggtggggcacggcggtcgaccactgcccgctcgcctcctgccccaccgcgccggggatcgccgtcaagggatgcccggtgttctga</cdnaseq>

Protein Sequence

<aaseq>MASLKSPVAAEEQAATAAAAAAKGEGERCPVEEVALVVPETDDP TTPVMTFRAWTLGLASCVVLIFLNTFFTYRTQPLTISGILAQILVLPAGQFMAAVLPS REVRLLGGRLGSFNLNPGPFNIKEHVIITIFANCGVSYGGGDAYSIGAITVMKAYYKQ SLSFLCALLIVLTTQILGYGWAGMLRRYLVDPADMWWPSNLAQVSLFRALHEKEGGDG GKGSSSRGPTRMRFFLIFFFASFAYYALPGYLLPILTFFSWACWAWPHSITAQQVGSG YHGLGVGAFTLDWAGISAYHGSPLVAPWSSIANTAAGFVMFIYLIVPLCYWKFDTFDA RKFPIFSNQLFTASGQKYDTTKVLTREFDLNVAAYESYGKLYLSPLFAISIGSGFLRF TATIVHVALFHGGDIWRQSRSAMSSAAAKMDVHAKLMRRYKQVPQWWFLVLLVGSVAV SLVMSFVYREEVQLPWWGMLFAFALAFVVTLPIGVIQATTNQQPGYDIIAQFMIGYAL PGKPIANLLFKIYGRISTVHALSFLADLKLGHYMKIPPRCMYTAQLVGTVVAGVVNLA VAWWMLGSIDNICDVEALHPDSPWTCPKYRVTFDASVIWGLIGPARLFGRHGLYRNLV WLFLAGAVLPVPVWLLSRAFPEKKWIALINVPVISYGFAGMPPATPTNIASWLVTGTI FNYFVFKYRKGWWQKYNYVLSAALDAGTAFMGVLIFFALQNAHHELKWWGTAVDHCPL ASCPTAPGIAVKGCPVF</aaseq>

Gene Sequence

<dnaseqindica>2894..3691#1943..2795#1752..1849#151..675#atccaaatcgaatccccgaaagcgttactaccttcctctccagatactggcaaattattttctttacaaatcattcgcagctagcttagctcgctttgcttgtagtggcgacttgtgaggcggaggaggaaggagatcgaggctagggagatggcgtcgttgaagtcgccggtggcggcggaggagcaggcggcgacggcggcggcggcggcggcgaagggggaaggggagaggtgcccggtggaggaggtggcgctggtggtgccggagaccgacgacccgacgacgccggtgatgacattccgggcgtggacgctggggctcgcgtcctgcgtcgtgctcatcttcctcaacaccttcttcacctaccgcacgcagccgctcaccatctcggggatcctggcccagatcctggtgctccccgcggggcagttcatggccgccgtgctgcccagccgcgaggtgcgcctcctcggcggccgcctcggcagcttcaacctcaacccggggcccttcaacatcaaggagcacgtcatcatcaccatcttcgccaactgcggcgtctcctatggcggcggcgacgcctactccatcggcgccatcaccgtcatgaaggcctactacaagcagtccctcagcttcctctgcgccctcctcatcgtcctcaccacacaggtctccctccacacctactccggttttacgctgggtttaatctttcggtttccacggttctttccgagggtgccgatatactgaaattttgatccgaaattgccgaagttttgaacaaaatttagtcaaatttaaataaaatattgccaaatttaaaaagataaaatttaaatttaaaaattcggtcgaaataacatcatattgggtccgaaatgacgttccggaattttgaaccatgattttacgtagcaccttaattgaatgcttaattagttaattaatcacaaagaaacaatcaacaaaaccacttcaaccatatctttttccctcagttcgattgcttgcttctgactggttctgactggtactaagaaataagaattgactcgtgtcttcttttttttggcgaatttgtcgcgcgattgcgacttgtatgttttcctccaaaagatgtgacaaatactgaaccaatcagacgttcttgcgttgctttatctcgcgtacgagttgccaccaatcatgcagcgttgaagttgaaattgaaagaaaacctcatgttggcatataacgtcaccgtgaatccatccatgtactaggaggccctacaaataattggcgtgattttgttcgtctagcatgcggctgcatgtgcctcttgcaaattttcgtattagtgggcaactttagcattcctgtcggattgctggcactaagatgcaaaaaagattgggtatatggtgacggatggtccgtgcacgagtcaaaactaagcagtactactactagtcataaataggagtatgagattattcttgcatcatgattagactagtcgtttaactaatccatcccaaagtaaaaaaagaaaacaatatagttaactaatcatgaacaggagttattctcacgcaatttaatctgagtgcgctatgaatctagaaaaactatatttattaattttttaataactatttagacgatatacaaacaatgagacatgaaaattcatatcgtggtagatagtataagtgtagtagcacagctaagtgacgtcatgcttggcttgctgcatgcagatactgggctatggttgggccgggatgctgaggaggtacctggttgacccggctgacatgtggtggccatcgaatttagcccaggtctcactcttcaggtaattaattaatcacgtcgtaaatctctcaattaagcaagatcagccagttaactatgcaggctaactaatgatctctgtgagtacatgaagggcgttgcacgagaaggagggcggcgatggcgggaaggggtcgtcgtcgagggggcctacacggatgcgcttcttcctcatcttcttcttcgcgagcttcgcctactacgcgctgccgggctacctgctccccatcctgaccttcttctcgtgggcgtgctgggcgtggccgcacagcatcacggcgcagcaggtgggctccggctaccacggcctcggcgtcggcgccttcacactggactgggccggcatctcggcgtaccacgggagcccgctggtggcgccgtggtcgtccatcgccaacaccgccgcgggcttcgtcatgttcatctacctcatcgtgccgctctgctactggaagttcgacacgttcgacgcgaggaagttcccaatcttctccaaccagctgttcacggcgtccgggcagaagtacgacaccaccaaggtgctcacgagggagttcgacctcaacgtggcggcgtacgagagctacgggaagctgtacctgagcccgctgttcgccatctccatcgggtccgggttcctgaggttcacggcgacgatcgtgcacgtggcgctgttccacggcggggacatctggaggcagagcaggtcggcgatgagctccgcggcggcgaagatggacgtgcacgcgaagctgatgcggcggtacaagcaggtgccgcagtggtggttcctcgtgctgctcgtcggcagcgtcgccgtgtcgctggtcatgtcgttcgtgtacagggaggaggtgcagctgccgtggtgggggatgctcttcgccttcgccctcgccttcgtcgtcaccctccccatcggcgtcatccaggccaccaccaaccaggcacgcatccatccatccatcgatctcaccatgaatcatcgtcgattcgtcgttgtccatctctgattgtgttagaaaaaaacttgttgtggttgcagcaaccggggtacgacatcatcgcgcagttcatgatcgggtacgcgctgccggggaagccgatcgcgaacctgctgttcaagatctacgggaggatcagcacggtgcacgcgctgtcgttcctcgcggacctcaagctggggcactacatgaagatcccgccgcggtgcatgtacacggcgcagctggtgggcacggtggtcgccggcgtggtgaacctggcggtggcgtggtggatgctgggcagcatcgacaacatctgcgacgtggaggcgctgcacccggacagcccgtggacgtgccccaagtaccgggtcacgttcgacgcgtcggtgatctgggggctcatcggccccgcccggctgttcggccgccacggcctgtaccgcaacctggtgtggctgttcctcgccggcgccgtgctgcccgtgccggtgtggctgctcagcagggcgttcccggagaagaagtggatcgcgctcatcaacgtccccgtcatctcctacgggttcgccgggatgccgccggcgacgccgaccaacatcgcgagctggctcgtcacgggcaccatcttcaactacttcgtgttcaagtaccgcaaggggtggtggcagaagtacaactacgtgctgtcggcggcgctcgacgccggcacggccttcatgggggtgctcatcttcttcgccctgcagaacgcccaccatgagctcaagtggtggggcacggcggtcgaccactgcccgctcgcctcctgccccaccgcgccggggatcgccgtcaagggatgcccggtgttctgagctcgccggccggagctgcacacggtggtgtatgtaggtagcaagaatttgggtttggattggggaaaaaccatgaattcagcctggtgtcagttaactgatacagtcctaatagttgtcagctgttacctcccgtgtgatgagtgtaacaaattggcttcctgcaaggaaatgatatagtagctagtagttcatataagatcatgccattctggaatatgctgaaacagagatgtgatggtagttaatcatcagagaatccgcaattacggagc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0751100, RefSeq:Os03g0751100