Os03g0766500

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Revision as of 13:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0766500| Description = Similar to Two-component response regulator ARR1. Splice isoform 2| Version = NM_001057917.1 GI:115455562 GeneID:4334...")
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Gene Name

Os03g0766500

Description

Similar to Two-component response regulator ARR1. Splice isoform 2

Version

NM_001057917.1 GI:115455562 GeneID:4334229

Length

5812 bp

Definition

Oryza sativa Japonica Group Os03g0766500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32600165..32605976

Sequence Coding Region

32600389..32600821,32601010..32601086,32601483..32601531,32601881..32602151,32605099..32605207
,32605614..32605853

Expression

GEO Profiles:Os03g0766500

Genome Context

<gbrowseImage1> name=NC_008396:32600165..32605976 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:32600165..32605976 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgcaaaggaacctgccgaatctctccctccggataagccctccggccgtctcgtcggcggcggcgccggtatcctccggaacaccgacgacggcggcgaggacgactctgccgaccggagtgattacagacgcagaaggaggaggcgaagtagcagcgttctttggaaaccctagctccggcagcgagccccccggtctgagcctggggctcgggccgacgacgccggcgcacgcggacgccggcggcggccgccatggcgaccaccacctgcagccgcaggggtgcgcgccgttcaagcgcgcggcggccagggcgtcccagctgccggcgggctcgaagcggagcgtccgcgcgccgcggatgcgatggaccaccgcgctccacgcccgcttcgtgcacgccgtcgagctcctcggcggccacgagagagcgacgccgaagtcggtgctggagctgatgaacgtgaaggatctgacactggcgcatgtcaagagtcacctccagatgtataggacagtgaagagcacagacagatcatcccacattgcctcaggagaggcgcagctgcagcagcaggcaggaatggaggtggccatggaggcggcagctggaggaggaggaaatggtggtggtggtggtggtggggtggtgctaccgatgatgccggcatgtgacgacatggttgggatctgtagctcccctgcgccgcctgccgcagcgactagttccgctgctgcctacttcctctgcgcgacgacgacgtcaacagcaactgctccactggcagtagtgccatcgcctcctgctccaaccattcccacaaggaggactgaccaaacgccagcgctggaaaagggtgtcgcgattgttgactcgttgcaccggtgtcagaagcataactactcaccagtgcttcaagatgctcttcatcagggagctgaagaagatcatcttattaccgggaacctaccaatgggaggagcatcagcacaagcgagcattgaggccatggcgactaccaactcttcaagccctgcaagctcatctccatcacttgcaagcctggagcagctgctacctgaagactcgtttgcgcccaacctggagatctccctcgggagacataactggaacatggaccatcctgaagaactcagcctgaaatacctgtga</cdnaseq>

Protein Sequence

<aaseq>MLQRNLPNLSLRISPPAVSSAAAPVSSGTPTTAARTTLPTGVIT DAEGGGEVAAFFGNPSSGSEPPGLSLGLGPTTPAHADAGGGRHGDHHLQPQGCAPFKR AAARASQLPAGSKRSVRAPRMRWTTALHARFVHAVELLGGHERATPKSVLELMNVKDL TLAHVKSHLQMYRTVKSTDRSSHIASGEAQLQQQAGMEVAMEAAAGGGGNGGGGGGGV VLPMMPACDDMVGICSSPAPPAAATSSAAAYFLCATTTSTATAPLAVVPSPPAPTIPT RRTDQTPALEKGVAIVDSLHRCQKHNYSPVLQDALHQGAEEDHLITGNLPMGGASAQA SIEAMATTNSSSPASSSPSLASLEQLLPEDSFAPNLEISLGRHNWNMDHPEELSLKYL </aaseq>

Gene Sequence

<dnaseqindica>225..657#846..922#1319..1367#1717..1987#4935..5043#5450..5689#tcacaccagaaccaccactgctataactctcctcttcctcttccaccaccaccaacaccacaatatatggtcctctactatcttaattctagaagtgtatgatcagtttgatccaagaagtggtagagagtagttggtgttgtattctcttccattgatcattgagctaagctatagctgtagcagcagcagcagcgacaacctcccatagctttgatcttgcaatgctgcaaaggaacctgccgaatctctccctccggataagccctccggccgtctcgtcggcggcggcgccggtatcctccggaacaccgacgacggcggcgaggacgactctgccgaccggagtgattacagacgcagaaggaggaggcgaagtagcagcgttctttggaaaccctagctccggcagcgagccccccggtctgagcctggggctcgggccgacgacgccggcgcacgcggacgccggcggcggccgccatggcgaccaccacctgcagccgcaggggtgcgcgccgttcaagcgcgcggcggccagggcgtcccagctgccggcgggctcgaagcggagcgtccgcgcgccgcggatgcgatggaccaccgcgctccacgcccgcttcgtgcacgccgtcgagctcctcggcggccacgagagtaagcgcctagctagctctaccttatctcaccatcactgtgtcctctcgtaatgtgatctgaattcgtgcagctacattttcttttccttttgcctgagatagtgagattgatcgattgattactccattgttttgcgtgctcaattctcacgagctcgttcttggcgatgatcgatcgatctgcaggagcgacgccgaagtcggtgctggagctgatgaacgtgaaggatctgacactggcgcatgtcaagagtcacctccaggtacgtgtatcacttggaaaaagaagagaaaaaagagaaaaaagaaagaaagaaagaaagagtggagaggtgataaaagggaagctactattgctaccaccatgcaagggaaagaagatggtgaatcttgttgcatgatggcttctttttgttttttccaccacttttatgggtgttcttactattggtaactacatgtgtactttgtctctggtgaatccctgggtcaagtactaagtgacaaacaaacggcatctagctaaccaggacaagccagatatatatcctttaaactagttaccaccttagcatatgtaattaattatacaagccatttggatcatgcaacacaagacatgcacctcattgatcactcactcatctactggtatgcagatgtataggacagtgaagagcacagacagatcatcccacattgcctcaggtattcatgtagctcaatttatttccattagaaaaaaagcatatcatccattgattgagaagtatatatacataccagctgtaactaagctaaacatatatgcagtgaccccggtgatttattctaatgtactgaaacgacttccagcctctgcctaaaaaagaaaaaaagagattttgagggagagacgttcctccaaatatattttttaaaaaaaatgtgcgcatgttagaaattaaacctgcatacattcatttgcactaaactatcaagtgcatctcgcctctacatcaactaagaatgcactgcacgcggcggcttaaattgaccattgcgcgcgcatttgcaggagaggcgcagctgcagcagcaggcaggaatggaggtggccatggaggcggcagctggaggaggaggaaatggtggtggtggtggtggtggggtggtgctaccgatgatgccggcatgtgacgacatggttgggatctgtagctcccctgcgccgcctgccgcagcgactagttccgctgctgcctacttcctctgcgcgacgacgacgtcaacagcaactgctccactggcagtagtgccatcgcctcctgctccaaccattcccacaaggtctgttcatgttcaatcctgtgtcagcttcagaacttattaatctctacttcatgcatttgcatttatttaacggtgaccgcgcgcgcggctcttcgtgtgcatattccactgctaaactcgttgattattagggtaagaaaaatatgagcgattattaacatgttttttatataatgaaatggtctacatctccgacccctgccaatgaatatatagccaaatgagcgattattagcattgtaaggttatttgcgcatgttgcacgtgctttacaatgggagcaatgtatctcaattctgaactttgtctactcttgagatgaccacttatccttttatcttttcgaaacaatgtatatgtacaagccgcatatagctactgacaagaggaaaaggacaccgttttgcatgaaatgtgctgttgtttgaacgttcttttttttttgccatatacattggcaacagttctccctaattaagtactgtacgtaattataaatatattatttgaagtttttttaaaagggaaaaaatatatcctactacaccccaacctgtgttcgctagctattgtatatataagaacatgcaattaattgataaaaaaaagtacatgagtgggactgtagaacaaagaataacgacgttttcaacatatatgtcaatcccagcctagtattataacaaaatgtattgagttcaattcatgcttgtgcatggtgtttgaactttgaaggatgtcaagtggttaattatattgagtaggagtgcgcataatctacttcgtcttatgtgatggtttggttgatttagaacctataagacacatatatagtcaaaccttttccaattgttaataaaacaaattaaatgctattgttaaactggtcgcccaaacaaagcctacaataaagataaaatattttcatccaataaaaaaacatgttgttctggatcaagtatactactggaacgacttgtttaatttttttccgttattagttatttaaatatttgactaattacatgcatgaaaatgttgtgtatatatacttttgatttgtcttgaacctggtttcataatgttgtagttttactagttctttttgtggtttacaacataaagtaaggttaaaaattttctttggaagactgttcattagcagtggcgtagctaggatttaaagtaaaagtggtccatctatatgtaatatgtcaattaaaagggtggtctactatacaatttttactatattaactagcatatatactataattttaaatttttaggtggtccgtggatcacggtgccacctagctggctacgcccctgttcattagtatttaaaactggtacttgaggtaatgaccatttttgtcgtgatttagcaaatctatttatattaccacacatgttgcgtatagacaaagctgcctttaagaaaagatcaatgtctactaattctgcagtcttcaactctgatgatctgatcagattgcggccagtagattgcattttggaagaaaagaaaagaaatagtacatcgtcatgaatgcatggtcgatgatggcacgtagacagggccaattacttatattaatctctgatcatgatggtaaaaatgtcgtccctgatcaatctgctagctcctctcatgcatatatgcctttttttttttcataagagttccagtacgtttagcccttgtcagtttcgcctgttcttccattcgaccgatttctgataaatttcatagaagcagctaattaacttgtgcatgcaggccggtcggctagctcctgcatcagcatgcactgagcgacaactagtgttttttctgtagcgcatatgtttccctgccgacctcttccccgtgtcgtcaccttcccatgcacgcttctccttgtccgcgtccacatgcatcgatctctcctcctcactcgatcataatgcccctgctcctgcacttcgataccttgttcttcttgatcccctctacaccgtacccatccctccccctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcaaacaagaagagctcgatgttccagtcaagtaggagaaatcaagtgaaggccttatttagattctaacttttttcttcaaacttctagtttttccgtcacatcgaattttcctacacacacgaacttccaacttttctgtcacatcgttctaattttttcaaactttcgattttgatgtggaactaaacacaacctaagtgaagtccaggcacagtagccgaggcaaagaagctatactagctaactgtggatggatagcatttgaagatcgatcgatttatactagtacatgtacatgcatgcatgagcaaataaagtcatatagtgtcagatatggaggcctcgcaacagtgttagctgcaatgcgtttttctgaagagttcctgaccggtgcccggtggccatgcatgcaaaaaatggatcggttaagtcagtcagtgttccaggttgttgggtgcattgcattggtggtgtagggacagatcgagccaggcatgttcccatatgcaacgcaactgcccaagggcatgactgtttcgtgagatctatatatatcacagattaaacagtgttgagctttgctaagcaacaaagaaatatggcagagtgctcgttcatgtctgcaatgataaagcatgcaggtgagatgtgaagggctagctagctcttgattagttagttatacactgcagtgatcgatggcttaaacataagagtacagtagctgctagtactgtcttgtaggtttcatgaatgcatatatggagatgttgatgtagtaatacagtcaatttcaatgttaataaatgttttgctacatggaattgataagagctgcctcgctttaacttttcttgagcacaggaggactgaccaaacgccagcgctggaaaagggtgtcgcgattgttgactcgttgcaccggtgtcagaagcataactactcaccagtgcttcaagatgctcttcatcaggtacatatctatgcatgcatccttgagatcacaagcataaatgggaagagtgtattaactagctccaccatggatgcacatctttgttgacttaactagaacttctgttgaacttctttggactactatatagcttctgactgtaactgtttaagtaggccctgaaacagttctagtcagtactccattatctgatcataaatagttagtagtagggaattgaaagtgtacgtactatctctatgtataacatatctcatgaatgtgttgtagtttttttttttttagaacggaatgtgttgtagtacaaattcatcttttcttaggagagcatcaagcatgcacattttctttcagaaaagtttcacaaatcatgcatatatctgctgtcatgtgatgtgaatagggagctgaagaagatcatcttattaccgggaacctaccaatgggaggagcatcagcacaagcgagcattgaggccatggcgactaccaactcttcaagccctgcaagctcatctccatcacttgcaagcctggagcagctgctacctgaagactcgtttgcgcccaacctggagatctccctcgggagacataactggaacatggaccatcctgaagaactcagcctgaaatacctgtgaaaaaagccaaaaaaaaaaagaggtttttctctcctctgggtttcactccactaaccattgatgattgctcgatcagatcgttgtgatgatgactgaaaaatatattcagtaaccgcatccatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0766500, RefSeq:Os03g0766500