Os03g0766900

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Revision as of 13:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0766900| Description = Allene oxide synthase| Version = NM_001057920.1 GI:115455568 GeneID:4334232| Length = 8350 bp| Definition = Oryza s...")
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Gene Name

Os03g0766900

Description

Allene oxide synthase

Version

NM_001057920.1 GI:115455568 GeneID:4334232

Length

8350 bp

Definition

Oryza sativa Japonica Group Os03g0766900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32609891..32618240

Sequence Coding Region

32609979..32610038,32610139..32610304,32610671..32610729,32611305..32611423,32611513..32611750
,32611821..32611944,32612092..32612171

Expression

GEO Profiles:Os03g0766900

Genome Context

<gbrowseImage1> name=NC_008396:32609891..32618240 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:32609891..32618240 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcacgccgtcgttgagggggagtccttctcgcccgactgctccaccctcctcatgccggcgctctcgatcggcaacgtggggcagctcgccgtcgacctgctggtgtcttcgtcgcgcgcgaggcgggtggcgtacctcgacgagccgtccgtgctgccctgcgccggcaacgacgccttcggccccgacgccgtcggtgatctcgcgctcgcgctggaagcttatgaatctccatcccataggctggccttcatacagcaacggtccccaattattacagggatggtggtttcatttgcaaaaaatgttgctaattttataagcagcattgaaaaagaccatgttgttatcctttcaagtttagattcaggcaagagaaggataattgatgcatccagtgatatgcaagtatattacctttcaagttgcaacgaggacggttctgatccgaaatgtgagaacttaggctggaagaagcttgaggaatacgatccatctcagcaaaggtggaagtgtcttgctagcctagttgaaggtggtcatctttcagaagatatgactggtgatcctgaggagatgacgataaatgattactactcgagcttgccatttgcagcactattctctgcctgcaaggctaaaggcttgaaagttacttgtgtactatgctactgctcagaaggggacaatatgccagaatctttccagttggctgaggcagcatgcaaacttgttgctcaaggccctgaacagttccatggaaatgggtccaatggatggactattccattgtcctggaaatcagtatatggaccaccacctgacctctctattttctag</cdnaseq>

Protein Sequence

<aaseq>MEHAVVEGESFSPDCSTLLMPALSIGNVGQLAVDLLVSSSRARR VAYLDEPSVLPCAGNDAFGPDAVGDLALALEAYESPSHRLAFIQQRSPIITGMVVSFA KNVANFISSIEKDHVVILSSLDSGKRRIIDASSDMQVYYLSSCNEDGSDPKCENLGWK KLEEYDPSQQRWKCLASLVEGGHLSEDMTGDPEEMTINDYYSSLPFAALFSACKAKGL KVTCVLCYCSEGDNMPESFQLAEAACKLVAQGPEQFHGNGSNGWTIPLSWKSVYGPPP DLSIF</aaseq>

Gene Sequence

<dnaseqindica>89..148#249..414#781..839#1415..1533#1623..1860#1931..2054#2202..2281#atccgctgcctgcctccatagctagcccactcgagcccttcaacttctcgcccaagttttgaagggatccagcgccgccgccgccgcgatggagcacgccgtcgttgagggggagtccttctcgcccgactgctccaccctcctcatggtccgggtcgccctaaacctctctcctctctccggtttgaatagctttgcctccatggctcatgacgcgggttggtgatcctttttttggggggctgcagccggcgctctcgatcggcaacgtggggcagctcgccgtcgacctgctggtgtcttcgtcgcgcgcgaggcgggtggcgtacctcgacgagccgtccgtgctgccctgcgccggcaacgacgccttcggccccgacgccgtcggtgatctcgcgctcgcgctggaaggttgggtgctctgtcctttgctctgctgtgctatgctagcaggacgcttgatggattggattgtgttaggggtggtgaactggtgattgggtgtgttcgtactttaaatccttctattatgcacaccaactgttcgatgaaatgtgttatagtccggcatgaacaattcctcctctgcacaccagctacttgatgaaatgccttgttcaggtctaagagaataatcggcacaagaaattaaaaaaaataccttaagattcagccacgcatattgttcttcagcaatggcactacttagtgtgtgaataataattgaaatataatgtctacttactttgtcaccttctgtctcttttctctttacagcttatgaatctccatcccataggctggccttcatacagcaacggtccccaattattacagtatgttgattttacctatttgccacatattttcggttttaactttataaatctcaaagagtacttaaagatacttttcacttgcttacgtgggtgattatgattcatgtagttacagaatcttgtgagctttgttgcacatgcttcagggttctttcaagaatgcataaagaacaatattgagctctattgtatttgatattataatatcaaaattgtactccatttgtttgaaattatagaatcagcttccctttcttttttgtacatcacacattacatttcctagactaacatctgtcccttggatatttgttccttgtgaactaaatttacatagcacatttgttattctgaaatgatttagagaaaatatagttattgatctattgaccttttctttaaagaggtacgatgggggtgagactagagttgcaggcgatgcttgggcctttcactctttgtttggaattttggtagttggtgaagtcctataagttgtctgcagtctgcacctataattgatgatttttttcatgagttgtgacacctttaaaccttttatactggttcaggggatggtggtttcatttgcaaaaaatgttgctaattttataagcagcattgaaaaagaccatgttgttatcctttcaagtttagattcaggcaagagaaggataattgatgcatccaggtaattgaaatgtatagcttcacatatcctgtcttttatgattaggattaggattgcgtctcattctcattaattgttttatctattagtgatatgcaagtatattacctttcaagttgcaacgaggacggttctgatccgaaatgtgagaacttaggctggaagaagcttgaggaatacgatccatctcagcaaaggtggaagtgtcttgctagcctagttgaaggtggtcatctttcagaagatatgactggtgatcctgaggagatgacgataaatgattactactcgagcttgccatttgcagcactattctctgcctgcaaggtttgattgatttgtttttaccattagaggtcactgttgtaatatgtttaatgacattattttattacaggctaaaggcttgaaagttacttgtgtactatgctactgctcagaaggggacaatatgccagaatctttccagttggctgaggcagcatgcaaacttgttgctcaaggccctgaacagttccatggtacatctatatatcaagtttattagtttttcatctattaaccgttggtaatttgccttactttccttctttaggaatatcgatattcaatattctgtgatcagattttggaatcctgtgtttacaaatcctgctgtgaattttcaggaaatgggtccaatggatggactattccattgtcctggaaatcagtatatggaccaccacctgacctctctattttctagacttgaagacctatctagtaagtcaaatttgtattgaagaaggcagtattatccgtactatgtgattatggtgttttattagcatacaagttcaaatatttaatttttaaaatttgagtgcaaaagatttgctaaggaaatgtcacaccaccttaaacgctttatgccatcatttgcatccaataaaccaaaatgcccctgtagactacatgcatcataaaccagcaaacctatattaattatgtcatcaacaatttaagctccagcatgagcttatagttaaaactaaagatgatttgatgcacttaatcagagatacgtcacaagatattctctattataaacacttttggcgtaggatgatttttcttgttagatacctatattccatagcataatatctgctgaaatgttctgtcttttctttgcaccattatttataggcatcttaaaattatttatagtcttctatggaaaaaaaattgtttgaacattttggaatgaaaagtttgtagcccaagacaatctatcatgaaagtttttcatgtattttgtatctcgactgagtttttctgttgcaagaaactacatcgttcggatactatagtgttgcaagaaaaaggtcgaggtttcctggtttataactggcttttgacagataggcagccactattgaccttggacgcaatttgttacaatattgtgattcatgaaattagtcaacatcagggtcagggccggccattgttgtaactatcagtacaatttgtaaatggttttcacaatcttgattgttattagaccactgtcgtggcaataacaagaccttgatatggtagctgtagtggaccagtagcacattattccacatgttaaactaaggtacttttggatctaggtagaaacatgttggtccataccgcaatgttatagtacctcttttatgcctttgcatcactgaagcctacaataattaaaaaaataataatcttagaatggtcctgggcagcaatcaaagacagaagctaaccactcgccaatagtaatttgttgatacttttgtagcggtatgctaggtcaattaactaaaatagctatttagttgaagtatggtttccttagcatccactgccccctcttttgttctgttgctaagtatgtcgaccctgattgcaatcccctcctttccatttgcaacttttggttggctaataaagtcctttttgcacgatttgataggtgaggttgctatcatgagcactatttaggattgaggatgttgaacttttagcatgagggttgaggggttgtgcaagaagtctccaggaaggtgatgagtatcaaatggtttaggtaaagcgacaaaagtgtaattccagttttcttgctgaactcgtggcttgattgtacttattttttttaagatcctgttatccggctatattgtaagggtatgattgtacttgaacctacaattgattagctggaacgtttatgtgactgataactgtgttaacaaaacgttagatatatgtcaattcagttggtggcgttctgtaggctgtagcttgccatgtgcaataagcagattgtggaattccaagctccaaggggtgtttccatccgggagcaactgccgttttgcattttggttcgattgattttgatgtggtggaagaatcagtgttgtgctagtgcgcaccgctttatgggaaagtagctaccaaaaagatacactgttggcaaggcaatcgcgaaggtgatgcccatttgcctgcccattttggatcgcctcaggcaactaaggtaaagaatgattgcatcttttttaagctctgtatgcatctgtgactaggaagtgtattcttcatgtcttatcccttttgcatagctgagggagttgggccgggtgcagttttgtggatgtgctgatcgtcaagccgccgagccagatgaaagattgcgaactccatgcccacaggaaatttgcaagtccataaagattccgagcaaaaactattgtggaggtaagaatgcatgtgcatctgttttatactcagtactgtcaggatagttgttagcccgcttctattttactcaaggttgattatctggggttttcttgcctttttttcgcttatgcttatcagctaaaatttaaattttcaaccttaaatttgaaattgattttaagaatttttttcatcaaaatttatttttcagtatttgcatttatatcattaataatacgtatataaaagttttatttgtaaattattttttgtttgtaattaagtcgtttagcttatttccccaataagccatcttttggcctctttattgggtcagggtcatatagctaggtcggtcaggttgacgggtggagtattttagagcagttacaatagcaggctataagccaactgtaaacatattgtaaagagataaaaaaagagagataagagcagcgggctacagatctgtagcccgctgcaacacggactccaagacgtaatgtgtgtatgacaggcaggaccaggtattaatagtatagtaagcaactattgtatgaattagctattacattgattatagatgatttggagctagtagttagctatactattaaacctgcttttacataatggatcggtattcagtactacgtagtataatttacttacgcacaggaatggtggtggtcctcaggaccgtacaaatgctggcgcgacaactttggttatccttcgccgagtttagttctaaattttttcttcaaacttttaactttttcatcgcatcaaaacttttctacacataaactttcaacttttttatcacatcgttctaattttaacttaactttcaattttgacgtgaactaaacacaccccttgtaacctgttagtacgttgaagtgtccatctccagtcctatgactatttgagtgtggcagcatgccagcatgcacacaacacacgggctagttcaacacgcacaatcgggattttgatagtggacaaggcgaccgttcaacattgagaaaataaaacaatacttagtctcgcttgggcaccatcacaccgatcactttcggtttctccatccactttcatctctaaacaatagccattaatgcatagtaatgcgacctcacacaagtgctaagatagccgccaccgcgaacaaagtttgttggctatctacaattgtatgcagtatttatgcatcaagtttgattctcagcattagtcacaaataatttgcacacctgctccatatggctaataagtgataacagaacagggtgacaatgaacaagataatagccatcaccatcgccgactccctggaatcttaatccaactttatggcgctaatctaaatatccgcttgcttcattagcactggagcttccttgttcttaccaggatagctagggtgtgttcgggagtgaacctcactcattaacacgcaaaacaaagcagcgtttatgtcataattaatcaagtattagttaaaataaatttgaaaaatatattaatatgattttttaaagtaattgtgaaaaaaaatatcttctactagtattatctcagcaaagaaaatcactaccagtgcaactccgtatccgtacaagctgattgatcacaccatacagagtgaaaaaattactaatactactaaaatatttagtgaagaagaagaggacggaaaataagatgaccgggcgccggagactttgaccggcggtggtcagaaggtggccttcttgagcgaggtgacggtgacagatgagccgagcgtggaggtgccgacctcgacgtcgaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgacgagcacgacgaagtccttgccggcgcactgcttgtcgtgcagggtgggcgccgccgtctcgggcccgttggaccacacgacgtggcggagcagccgcgcgccgtcctcgccgaggaacctgtccggcacgtactcctccggccgcgcgaacacccgcgggtccttggtcgccatgggctggtacccgaacagcatctccccttccctcacctcgtacccgtagtcgtggctctccaccaccatgtcccgcttcgccctcccgtactgcatcgccaccggcggctcgatccgcagcgcctcgtacaccgccgacttcaccagcggcatctccgccagcgccttcatcgtcacctccccgccgttgtcccgcacggcgccgcgcacctcggtggcgagccgcccgtgcacacgcgccccggcgcggcccagccacttcaccagcgtcgggaacaggatcttcatcccgccgaacgagttgaagcagagcgcgaagaggatgttgtgcacggcctcctcccgtgcaatgccgaggcgctccccctcgtcgacgacggccttggccgcgtcccggaagaagtcggcgaggcggtcgtagtccttcttcaccagcgccggcgggaggcggagcgagtggaggagcgtgtcctcgacgagggtggggaggccgaggctgagcagcgggctgagctggaacagcacccacttggtgatcagcttgggcccgtcgcgccccagcgccgacttggccgggtcgcggccgaggagcccctggcagaggaagccgaacgcggcggcgtcgttgtggacgccgaagtcggccttgccgacgcgggcgaggtcgttctccatgaggccgaacaggtcgccgtacacctcgcggaacttggggatcacctgctgccgccggtgggagaggaggtagaagaggagggtcttgagcggcgcgtggttgggctcggaggggtcaaggtaggagaggacgcggtacccgccggtgaggtcggtggacggcatgaaggtgccggtgaagaggtcggtcttgtcgacgagcgacgtgtcgaacaggacggggaaggaggcggcgtcgagcagcgccaccacccgcgggtcgcgcgccacgaacggcccgggcggcatgttgaggcgcaccaccgtggagcggtgcgcgcggacgcgcgccgcgaagaagccgtcgcggccgcccgggccgtagaagtactcgtacctgtcccggatcgcgcccaccaccggcgggccgtagtcccccggcaccttccgcagcggcagccgccgcttcggcgacaccacctcctgccggtccgtcgccgacgccgacgccgacgcccgcgtctgccgcctgatcacgacgcgcgccggcgacggcgacgcgaacgagatgcaagccgccgccgtggccatcccccccttgatccgatgaactacacctagctactactccccgagctagctactagctccaactgcaagtccacagccacggccgtgcaggtgcaggtgcaggtgtgcagatggtgtcaattcgtcgaacagtatgagcacaattaatctcggatcgagcgtcgttgggggttttaaaagtggaggagacgcgacgcagacacagtcacgcagccggagtactagcagctagcaggtgagcctggtctattcaacgtggggcgagtgggaaaacgtggggctttgattgtttattattttacgcgggtgtgaagctggtccgggtgatggatcgcgcggcggcgggatggccggcggtggctttccggtggcccggcgatgggcgcgcacgtggggaagatgggtgcagactccggagcgtgtagcacgcacgcactgggcgtaaaaggtggtgagcccaatcaccaccttactggttgacctgccgaagaccgctccgctggccggtgtcttagggctcctccgaatagtaggaatgaaaaaataaaggaataggaaaagcacaggattctgacaggaatacaattgtaaaacagagaattgcaaaacacaggaatggctgtttgatattggaccacaggaaaaacgtagaaatcagatgagagagatagacttagaggaaatgttccaagaggttatacctcttgctaactttcctccaaaatgtgcatatgattacccattccataggaattttaaaggattggatatgat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0766900, RefSeq:Os03g0766900