Os03g0767600

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Revision as of 13:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0767600| Description = BTB domain containing protein| Version = NM_001057923.1 GI:115455574 GeneID:4334235| Length = 2928 bp| Definition =...")
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Gene Name

Os03g0767600

Description

BTB domain containing protein

Version

NM_001057923.1 GI:115455574 GeneID:4334235

Length

2928 bp

Definition

Oryza sativa Japonica Group Os03g0767600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32635847..32638774

Sequence Coding Region

32636110..32636224,32636317..32636387,32636647..32637969,32638054..32638596

Expression

GEO Profiles:Os03g0767600

Genome Context

<gbrowseImage1> name=NC_008396:32635847..32638774 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:32635847..32638774 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggggaggaagatgaagagcgcgagggagatggccagggaggagaagaatcatcatcatcatcatcatcagcagcagcagcagcagcaatcgagctccaaaggccaagcatggttctgcaccaccggactccccagcgacgtcgtgatcgaggtcggcgacatgacattccatctccacaagttcccgttaatgtcgaggagcaagaagctccacgacctcatcaccaacagggagtcgcgagctgcgggcggaggagagcaagatgaggaggaggaggaggatgccggcgagatcagagaggaggaggtggtgctggaggtcgacgaggactccgacgtgcaccgcatccgcctcccggacttccccggcggcgcggaggcgttcgagcaggcggccaagttctgctacggcgtcaagctggacctcacgccggccaccgccgcgccgctccgctgcgccgccgagcgcctcggcatgtccgacgaccactccgacgacaacctcatctcccgcgccgacaggttcatgtcccacaccgtcctgaggaaccccagggacgccatccgagccctcaggtcgtgcgagggcctcctccccctcgccgacgacctcggcctcgtgtcacgctgcgtcgacgccatcgccgccaaggccgccgcgtccacgcccaccgcactgttcggttggcccatcaacgatgccgccgccgccgccgccgccgccgccggcgaccgtccgcgccgcaagaacaatgccggcgccggcgcgacgtggttcgacgacctcgccggcttgtcgctggccacgttcacccgcgtcattgccgccatgaaggagcggaacgtcggcccggagatcattgaaggcgctctcatcgcctacgccaagcgctccatccctgggctgtcgcgctccggccgccatgtaggcggcgccaccgccgccgccgcggctgcgccgtcatcggacggcgagcagaaggcgcttctggagaccgtcatcgccaacctcccggaggagaccatcaagagcaacgcccacaccggcacggccgtgggcgccacgacggcgcgcgtcctcttcggcctcctgcgcacgacgagcatcctacaggcgtcggaatccgcccgtgacatgctcgagcggcgcatagccgcgaggctccccgacgcggccctcgacgacctgctcatcccgagctactcctacctcgtcgagacgctctacgacgtggagtgcgtcgagcgcatcgtgcgctacttcctcgaaggccgagacgccgacgacggcaacgacgacggcagcgagctggagacaccgggcagagaggccagccgacgagccatgctcgccgttgggaggctgatggatgcctacctgggcgagatcgccgcagatgccaacctgaagccggacaaattctgtgacctcgcctgggcattgccggacggcgcccgcgtctacgacgacggcctctaccgtgccgtcgacatctatctcaaggctcatcctggattgagggaagaagagaaggagaaggtgagcggtgtcgtcgacggccgcaagctgacgctagaggcatgcacgcacgcggcgcagaacgagcggctgccgctgcggacggtggtgcaggtgctcttcttcgagcagctccagctgcgtcgcgccattgcaaggacaatcatggcgaacgaaggtggagcagctggtcaaggggaggaagaaggcgacagcgatgccggtggaacatggcgggtggcgacaagggggaaccaaatgctgaggctggacatggacagcatgcgaaaccgggtgcaggagctggagcgtgagtgcacaagcatgaggaaagccattgagaagatggaccggcgtggcggcggcagcacgccaggggagagaggagcaacgccggcgatggaaggacggtggggatcaatggtgacgaagcggttcgggtgcaagttcccggcgcaggtgtgccagtcacagcagcgcacggtggtggcgcggcctcgccggccacgaatcgagcagagcccctga</cdnaseq>

Protein Sequence

<aaseq>MQGRKMKSAREMAREEKNHHHHHHQQQQQQQSSSKGQAWFCTTG LPSDVVIEVGDMTFHLHKFPLMSRSKKLHDLITNRESRAAGGGEQDEEEEEDAGEIRE EEVVLEVDEDSDVHRIRLPDFPGGAEAFEQAAKFCYGVKLDLTPATAAPLRCAAERLG MSDDHSDDNLISRADRFMSHTVLRNPRDAIRALRSCEGLLPLADDLGLVSRCVDAIAA KAAASTPTALFGWPINDAAAAAAAAAGDRPRRKNNAGAGATWFDDLAGLSLATFTRVI AAMKERNVGPEIIEGALIAYAKRSIPGLSRSGRHVGGATAAAAAAPSSDGEQKALLET VIANLPEETIKSNAHTGTAVGATTARVLFGLLRTTSILQASESARDMLERRIAARLPD AALDDLLIPSYSYLVETLYDVECVERIVRYFLEGRDADDGNDDGSELETPGREASRRA MLAVGRLMDAYLGEIAADANLKPDKFCDLAWALPDGARVYDDGLYRAVDIYLKAHPGL REEEKEKVSGVVDGRKLTLEACTHAAQNERLPLRTVVQVLFFEQLQLRRAIARTIMAN EGGAAGQGEEEGDSDAGGTWRVATRGNQMLRLDMDSMRNRVQELERECTSMRKAIEKM DRRGGGSTPGERGATPAMEGRWGSMVTKRFGCKFPAQVCQSQQRTVVARPRRPRIEQS P</aaseq>

Gene Sequence

<dnaseqindica>264..378#471..541#801..2123#2208..2750#cttccccacttggaatccttcacttctcccacctaaaaccaagcatcagaatagtacgccattattgagagctccctcgtctctcgtctctccctggtgtccttccccttctctgattcccatagcgacagcaaatgagcaaacacatcacaccccttcctttctcccgagaaatgccttagctcatagcagagttttttttttcttcttcttcttttttcgccattgctgttgtctgcttcgttcttccaaaggatcacgagatgcaggggaggaagatgaagagcgcgagggagatggccagggaggagaagaatcatcatcatcatcatcatcagcagcagcagcagcagcaatcgagctccaaaggccaagcatggcaagcgactgattgagctctgtctctgtctctctgtcaccgatttgctgttctctgatccccaatctgtgtgtctgtcttgtgttcatcaggttctgcaccaccggactccccagcgacgtcgtgatcgaggtcggcgacatgacattccatctccacaaggttggtgaatcttatcccccacacctgtgtctcccataatttccattttttttctttttttcccaactctccttgatgcacggacagtgttggctttgagcactttcttttccttgatctcaattaatttgctgctaaatctcgtactccaaatctctgtcatgattcatgagcttgtgtggtccatttcttgatgtcgggctatggaaagtgtgaagattttctgcgtttgttgttgatatcgagaatttccttgcagttcccgttaatgtcgaggagcaagaagctccacgacctcatcaccaacagggagtcgcgagctgcgggcggaggagagcaagatgaggaggaggaggaggatgccggcgagatcagagaggaggaggtggtgctggaggtcgacgaggactccgacgtgcaccgcatccgcctcccggacttccccggcggcgcggaggcgttcgagcaggcggccaagttctgctacggcgtcaagctggacctcacgccggccaccgccgcgccgctccgctgcgccgccgagcgcctcggcatgtccgacgaccactccgacgacaacctcatctcccgcgccgacaggttcatgtcccacaccgtcctgaggaaccccagggacgccatccgagccctcaggtcgtgcgagggcctcctccccctcgccgacgacctcggcctcgtgtcacgctgcgtcgacgccatcgccgccaaggccgccgcgtccacgcccaccgcactgttcggttggcccatcaacgatgccgccgccgccgccgccgccgccgccggcgaccgtccgcgccgcaagaacaatgccggcgccggcgcgacgtggttcgacgacctcgccggcttgtcgctggccacgttcacccgcgtcattgccgccatgaaggagcggaacgtcggcccggagatcattgaaggcgctctcatcgcctacgccaagcgctccatccctgggctgtcgcgctccggccgccatgtaggcggcgccaccgccgccgccgcggctgcgccgtcatcggacggcgagcagaaggcgcttctggagaccgtcatcgccaacctcccggaggagaccatcaagagcaacgcccacaccggcacggccgtgggcgccacgacggcgcgcgtcctcttcggcctcctgcgcacgacgagcatcctacaggcgtcggaatccgcccgtgacatgctcgagcggcgcatagccgcgaggctccccgacgcggccctcgacgacctgctcatcccgagctactcctacctcgtcgagacgctctacgacgtggagtgcgtcgagcgcatcgtgcgctacttcctcgaaggccgagacgccgacgacggcaacgacgacggcagcgagctggagacaccgggcagagaggccagccgacgagccatgctcgccgttgggaggctgatggatgcctacctgggcgagatcgccgcagatgccaacctgaagccggacaaattctgtgacctcgcctgggcattgccggacggcgcccgcgtctacgacgacggcctctaccgtgccgtcgacatctatctcaaggtaaaccaacactgacaacgagtgttctacctctttacaacacaatgccattacttagcagtgattgttttgttctgttcttaggctcatcctggattgagggaagaagagaaggagaaggtgagcggtgtcgtcgacggccgcaagctgacgctagaggcatgcacgcacgcggcgcagaacgagcggctgccgctgcggacggtggtgcaggtgctcttcttcgagcagctccagctgcgtcgcgccattgcaaggacaatcatggcgaacgaaggtggagcagctggtcaaggggaggaagaaggcgacagcgatgccggtggaacatggcgggtggcgacaagggggaaccaaatgctgaggctggacatggacagcatgcgaaaccgggtgcaggagctggagcgtgagtgcacaagcatgaggaaagccattgagaagatggaccggcgtggcggcggcagcacgccaggggagagaggagcaacgccggcgatggaaggacggtggggatcaatggtgacgaagcggttcgggtgcaagttcccggcgcaggtgtgccagtcacagcagcgcacggtggtggcgcggcctcgccggccacgaatcgagcagagcccctgaaattcttctcccttgcacatcatagcttccacttgttttctcgtgttgattctttacttagatttgtggaaaatggaggggttttccttgggagatattgagttttaccatgtttgatcattgaattgtagcggtgcacaattgctcagtgccatctggatggccaatgcatcaagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0767600, RefSeq:Os03g0767600