Os03g0769000

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Revision as of 13:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0769000| Description = Protein of unknown function DUF547 domain containing protein| Version = NM_001057928.1 GI:115455584 GeneID:4334246| ...")
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Gene Name

Os03g0769000

Description

Protein of unknown function DUF547 domain containing protein

Version

NM_001057928.1 GI:115455584 GeneID:4334246

Length

8062 bp

Definition

Oryza sativa Japonica Group Os03g0769000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32676396..32684457

Sequence Coding Region

32676396..32676710,32677085..32677222,32677332..32677418,32677513..32677572,32677666..32677765
,32677860..32678266,32678438..32678908,32679013..32679135,32679499..32679582
,32679712..32679781,32679870..32679996,32684436..32684457

Expression

GEO Profiles:Os03g0769000

Genome Context

<gbrowseImage1> name=NC_008396:32676396..32684457 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:32676396..32684457 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccttgaaccctaagaacgttcttgattggttcataccttggtgccaagaaatggaggtggaggcgatggagaagaagggacacagagcctttgctaaggcaattaagtctttcggttcttcagaaaggcacaagcgttctaagagtgatcttgaggatatgtgtgctaaagatgcgctgtatgcttcagataaaacatgcgttcagcctaagccagatgctgtaaaagttaaggtaaaaagtgatatcaacgctgaagtgcaacctgggagaggagcgcagagcttcttgagaaaagagattctccagctagaaaagcacctcaaggatcagcaggtcatgcgtggcgccctggagaaagctctgggaccgaacgctactgctgctccagtcaacgtatcaaacgagaatccaatgccaaaggatgccaaagaacttatcagggagattgctacactagagcttgaggtgaagaacatggagcagtatctccttaccctgtacaggaaggcctttgagcagcaagtgcccacattttcccctcctgaccaccggggagctccgaagccgccggtaccggcgatggcggcagtgagctcgcagcctgtgcagctgcagaaatcacccagtgtcaaggcatctcgcaagaacaacagagctgacgcaatgctgcgatccagctacccgccaccgtcccgtaggacgttgaacgatccagtgatgacggattgctctacgtcgggttgctctagcaggctaggtgaatctgatgttctccggtgccagtctgcggtgtcgtaccgcggcatttgttcgtccaggatttcaccatcggaggacagtcttgcgagagctcttcggtcatgccactctcaacctttctcatttctggaggaaggagagagtactgcagcaggagtgataagcttagcagagtatctaggcactaatgtagctgaccacattcctgaaactcccaacaacctatcggaggagatggtgagatgcatggcaggggtgtactgcaaacttgcagatccccctttggttcaccacggctcgtcgtcttcgccaacgtcatcgttctcctcgacgagtgcgatatccccgcagtatctgggggatatctggagtcccaattacaagagagaatctactctggactctcgtttgataaaccctttccatgttgaggggttgaaggagttcagtggaccatacaatacaatggttgaggttccactgatttgccgcgatagtcggaggctaaaagaagttgaggatctgctccagacttacaagttgattttgtaccggttggaaaccgtcgatctcaggagaatgacgaacgaagaaaagattgcattctgggtcaacatacacaacgcccagctgatgcatgcttatctaaagtatggcgtcccacagaacaatctgaagaagacatcacttcttgttaaggctgcctgcaaaattgctggacggagcatcaatgtagctgttatccagagcatggttcttggatgcaacacatactgtcctggacagtggttacgtactttgcttcacccaaggatcaaaagcaaagtgggcaaagtagggcatgtgtggcaagcctttgccgttgcacaatcagagcctcttttacgctttgcgctttgttcaggaagccattctgatcccgcggtgagagtgtacactccaaagaggctgttccatcaactggaggctgccaaggaggagttcatccgggcaacggtgggcatctggaaggagcagaaaatactgcttccaaagctcgtcgaggcgtatgcgaaagacgtcaagctctcgtcgcagggccttgtcgacatggtgcagcgctacctcccggagagcttgaggatggcaatgcagaagtgccagcagagcagatccagcaagatcatagaatgggtgcctcataacctgaatttccggtatctgctgtccagggacctggcatttcctcacctgaactga</cdnaseq>

Protein Sequence

<aaseq>MTLNPKNVLDWFIPWCQEMEVEAMEKKGHRAFAKAIKSFGSSER HKRSKSDLEDMCAKDALYASDKTCVQPKPDAVKVKVKSDINAEVQPGRGAQSFLRKEI LQLEKHLKDQQVMRGALEKALGPNATAAPVNVSNENPMPKDAKELIREIATLELEVKN MEQYLLTLYRKAFEQQVPTFSPPDHRGAPKPPVPAMAAVSSQPVQLQKSPSVKASRKN NRADAMLRSSYPPPSRRTLNDPVMTDCSTSGCSSRLGESDVLRCQSAVSYRGICSSRI SPSEDSLARALRSCHSQPFSFLEEGESTAAGVISLAEYLGTNVADHIPETPNNLSEEM VRCMAGVYCKLADPPLVHHGSSSSPTSSFSSTSAISPQYLGDIWSPNYKRESTLDSRL INPFHVEGLKEFSGPYNTMVEVPLICRDSRRLKEVEDLLQTYKLILYRLETVDLRRMT NEEKIAFWVNIHNAQLMHAYLKYGVPQNNLKKTSLLVKAACKIAGRSINVAVIQSMVL GCNTYCPGQWLRTLLHPRIKSKVGKVGHVWQAFAVAQSEPLLRFALCSGSHSDPAVRV YTPKRLFHQLEAAKEEFIRATVGIWKEQKILLPKLVEAYAKDVKLSSQGLVDMVQRYL PESLRMAMQKCQQSRSSKIIEWVPHNLNFRYLLSRDLAFPHLN</aaseq>

Gene Sequence

<dnaseqindica>7748..8062#7236..7373#7040..7126#6886..6945#6693..6792#6192..6598#5550..6020#5323..5445#4876..4959#4677..4746#4462..4588#1..22#atgaccttgaaccctaagaacggtgtgaaatgcctacttgaaatctactatgttcattttttaggtttctcgttataaaagtgatttttagataagatttatactaagtgatgaaagagtagtaatttgcataagatgatggactgggtttttcaccttttggttcttttagaaaacttattctataaatagaccaataaaaaaacttattttaaaagtggactttttcatggcgccggtccaacatgacggcatctatgatcgttggcatcgtccccctcatccctagttggaagctaaataatttaaagagagacaacaccaatatcgttgacaccgagggtttatttgtacttttttttaaaaaaaactatttgtaataaaaaaatatttataaacagatcaaccttcaaattagtgacttactctattagcatcgttatattggaccacaacattaatgaagttggcgccgtgaaatgtttaattcctaaaataagtttttttagtctatttgtagaataaatttttaaaaaagaccaaaagatggaaaatcaaagaaggatggacaacacatccaattcatcgtactccaagtaatagtaaatgcttgttttttctacagagtctcagtacaaaatcacttgttagcgattgtttagtttggtaaagtaacaaatgtccgactgtccgattcaacatgaatactcaaatttacggctagttatcttttttccacacgaatgctaggagacgggataccgttgccctaacaggatagcttcccctccacctccatcagttgcaagagcgcgaggcgcaatggccgagccgatggcgggggcagagcagcggcggtggccggagctagagagcgggggagggggtggcggtggtggccggagccgagggagagagcgacggcggtggtcggagccgaggcgccggtggttggagcaagagagcggcgggatggggcggcggcggtggccggagccagagagctgagggaggggggcagtggcggtggcggtggctggagtcgagggagagagcggcagcggtggccggagccgagggaggtagctaacaacggtggccggagccaggggaggtaggggcagcggtggtggtagccggatccagaggagggagggggtggcggtggtgcggcccggagccggaggagggagcggcggcggtggttgaagctagggaggaaggggtgctggggtgccagtggtcgtcgcgcgtcgacgtcgaggtatgtatcgtgtgatacctagtaagtatcgcatgatacctggcaggtatcgcgcgatacttgataggtatcacctgatatatcgcaagtatcacctgataggtatcgcgtgatacctaatatgtatcacctgatacctcgcaagtatcgccttctatgtggcaagaatcgcatgatatctaataggtatcacatgatacctcacaagtatcacctgaaacatggtagaatcgcctgatacctgttaggtatcacttgataccggatataatatctaaccggtatcatcccgttcgaaaacaagattatgttatatagcagcactctttttccaagtaatataagtatatttataccgttaaagtcggtataaacatttttatttaccttttgatgtgtaatttcatctgcacgaacgaaccaggccgtggcacatgtacaaagccgccatcaccacagaagatcagcaaaagcctcccactttccgcttcccccccccccccccccccccccccccccccccccccccggccacttttccctgcacggccaaacctgcctgacctaccaccccccaaatcccatgcgcccgcgacgccccaaaccacaccaccaccaaccgctcgccgccgccgcgcggctgattattcctgtgacaaaccgagcggcgtctcgccgcagacgacaagtgctcgcctctctctcccgttgctttccttccgagagatgctacgtactactactccggtaaagtgccaagagacgacgaggagggcgttggattagcgagagaacaaggagaagcgcccaacaggagaggagctgatatcctttatcctcctcctcctgcttgctttcgtcccttttgaggattgttagtgtagcagtagtacttgcttttgttccattctttagggtttgtgcccctaaagaatggcttaaacattctttcggcaaatgcgtgtgctcttgtctttaatgactgtttgtcttagcagggtaggagtaggttctagccttttgttcctgtagtttgtactactactaggatcatttcaggtttgggttgctttttcaaagacaaattgcgtgaaatatattcttttctgcatgttttgtttattagtgtaaacattattgtttgcatgaaatgtttacagtgtcacattcagtactgttttcacaaaaaaattttaccttaagagaataagagtttgtatcttctctttgaaaaatcgtacagaggatcatgtgtgcatctctttttttttaatgttttgtttagtgttcaaattgttgcatgaaatgtttacaatgtcacattgggttctgtataaaacattattttaacttacaactactgcatctgtcccaaaatatttttgaatggaggggagtatctctttttattttacaaacaattatgtatacagcggcatgcagactcgaaaactgtactacattttacggattggcaagtgccaacctttgggtaatataggtgttatggtacatcacgattgcttgagactcaggagtcaggaattcaagatagctgcaccaacccattgcaaatttgcaatgcaaaaggaatatatgagatggttggttgcattagtgatgagttccctttacttccaaatgccaaccaattttagtttgtacaatcaatgtgtggtactatcacgggatagtatatgtagcgtaaacctataaactattgtaggatacacaaatggatgtctggaatttgttcacgtccccctgattaatcttttacttctagattaaagtatgattatttttttattggctaaatctcagatgataatttgtgtatcatataacagttttcaggtttgtattacatacagatggtttgcactatatattttctccgctatcgttgtgtctctatctccaggccatttctagtcttctctacatgagccaatgggaagttggcttgcattgaaatttgcatcattgttgaccatagtggaaggacgagtgagtattaacaagtggactcattagtcattagtcatggtggttagtatgcacgtacgctgattaatttgaaacaaaccaataatgatgcccttctccaaatggcactgcagactacctgctctcggctcatttgctggtctgtcagtatcataaaacaaactcatcgcagggcagaaaaaactattatggtcacaaagatttctgaagagctatgtcaggcacatctggaaacctgcctgttccattaagaaccccaaactccaaagtgcaatttcaacatactactaatattctgatgctgaaatccctcaaccaagtttggtagacaataacctaatttaacaatgctgatgttttgtcggttaggtatgcaagcttggctctattagcagctggatgcagtaatcctgagttaatataatcccacaatcttactgctgctcacaaccccaaaaactgttactcgaggttggttgaggtagaaagcctaagacacatataaccaagctgatgttagaaaaaaaaaagctaaccttttcctagttttgcaagctgcagaatacaaagaagccgggagggattaaaattttcagacctgtggatgcaaaaaaggtacagtgattagtgtatactactactactccatttatccagcaaagaaccaagggaaaagttgtgcgtggcattttcacgagatgtcacagtcaacggcctttttgcaggcgccctaaacactagtgtgcgtcactggttgtggctgtgctgtatataacgcagagtgcggggtttctgcagagctggagtggagaaaggagagacctttccattccctctctgaaaaaacaacaatttagtttttgacctgaagggtggtagtagtgggctagttggcggtagatggcattgacactggttgccaagcacagtgcaggttttgttggagcctagtgtggcttcagagctcagaagcagccacatttctgcattcttggatcatttggagctctccttgtttgttgttgggtctcttctctttcctgcttccgagttctgtgaaccagccaactaatctctgtaagttctactatcttgttcttatttctcctgctcctttgcccccaaggatatggctactactgcttgatgtcctgttgcttagagtgttcttggctggttgctttcagttcttgattggttcataccttggtgccaagaaatggaggtggaggcgatggagaagaagggacacagagcctttgctaaggcaattaagtctttcggttcttcagaaaggcacaagcgttctaagaggtttgtgtctttggatttcttatgcaaagttctctgtttctgttgttacgaatgctaataacgagatctagatgtttttctatggcagtgatcttgaggatatgtgtgctaaagatgcgctgtatgcttcagataaaacatgcgttcagcctaagccagtgagtttattttctgttctctgttctctgttctgtcttccacgtttttctactgtattctgcagtaaatgcataatagttctgcatagtttcagtaattttgagcattctgtgttctggtttactcaggatgctgtaaaagttaaggtaaaaagtgatatcaacgctgaagtgcaacctgggagaggagcgcagagcttcttgagaaaagaggtaatgagtgtaaaattctatttttcttcattgattttatcgccaacctgccctttctggacttaaaaatcttttttagtaggaaaagaaaagaatcacatttcaattacagacaggaggttgcatttcctttttgtatctccatgcttgccaaatgacactttttttttaaattttcgtttttggccgaacaatgcaaatccttaaacagaccaggtttttttttgtttgttttacaaacaaagcatgattttcccagtgaaaaataatcctggtaaaaatttctctgcaaatggtctaggataatgtcacttttctgctgaattcaacatagtttagactcatcatgacggcctgatgcagattctccagctagaaaagcacctcaaggatcagcaggtcatgcgtggcgccctggagaaagctctgggaccgaacgctactgctgctccagtcaacgtatcaaacgagaatccaatgccaaaggtaactcctttgcctaaccacatgaatgagaattcaccaattttaagtttttaaccccttacctgagcaatactgatctgaagataaaatggtttttttttcaggatgccaaagaacttatcagggagattgctacactagagcttgaggtgaagaacatggagcagtatctccttaccctgtacaggaaggcctttgagcagcaagtgcccacattttcccctcctgaccaccggggagctccgaagccgccggtaccggcgatggcggcagtgagctcgcagcctgtgcagctgcagaaatcacccagtgtcaaggcatctcgcaagaacaacagagctgacgcaatgctgcgatccagctacccgccaccgtcccgtaggacgttgaacgatccagtgatgacggattgctctacgtcgggttgctctagcaggctaggtgaatctgatgttctccggtgccagtctgcggtgtcgtaccgcggcatttgttcgtccaggatttcaccatcggaggacagtcttgcgagagctcttcggtcatgccactctcaacctttctcatttctggaggtaatgattcacactgcatttttttttactaattacaagtcctcgtgcatgataagaaatgatgggtacagtgtggttatgagattatgcgcaacataacaggttgtgaaagtttccgtctggacctgtataagattctaagttgcttgtttttatgaattttgtgagcaggaaggagagagtactgcagcaggagtgataagcttagcagagtatctaggcactaatgtagctgaccacattcctgaaactcccaacaacctatcggaggagatggtgagatgcatggcaggggtgtactgcaaacttgcagatccccctttggttcaccacggctcgtcgtcttcgccaacgtcatcgttctcctcgacgagtgcgatatccccgcagtatctgggggatatctggagtcccaattacaagagagaatctactctggactctcgtttgataaaccctttccatgttgaggggttgaaggagttcagtggaccatacaatacaatggttgaggttccactgatttgccgcgatagtcggaggctaaaagaagttgaggatctgctccagacttacaagtgagctgttctttcttgtctctgtttggtgaatgcagatatttttcttatatgttcaatgtcctaatacgatatactgaattgtatacttcaggttgattttgtaccggttggaaaccgtcgatctcaggagaatgacgaacgaagaaaagattgcattctgggtcaacatacacaacgcccagctgatgcatgtaatgcttctactgtttcagttcactacaaatttctagcattgtctcaagttgtttttttgttaatgggtataatttgtactacctccacaggcttatctaaagtatggcgtcccacagaacaatctgaagaagacatcacttcttgttaaggtaaacattttcctttgtagaatcaatggaatgcacctttcgtgtacttaattcagacgaagtttcttctttccctgacatctgttcaccacaggctgcctgcaaaattgctggacggagcatcaatgtagctgttatccagagcatggttcttggatgcaacacatactgtcctggacaggtaaagcaaacatgattattaggtcaaaactagttaaaagtgtaatattcacactgtactgattatatagcaagcatgctaattctatgtgttgttccttttaatgcagtggttacgtactttgcttcacccaaggatcaaaagcaaagtgggcaaagtagggcatgtgtggcaagcctttgccgttgcacaatcagagcctcttttacgctttgcgctttgttcaggaagccattctgatcccgcggtaagctcattgcgttttctcaaattggtgtcatcttcattgtacctcgatctattttaaactaaccaatgcttccttttatcaagccatacttgagtaattcaaccctttttagcttttaggcacaaattcggtatgaaaaagtctcacgtgtcctgaggaaatcataccctgacacattgtcaaaacatgctaatgaaatgaaaacctttcactgattggggaatattgttaggaatcattcaatcattctccatgtttggaatctctcaccaaagttactgcaggcattattacttggtggtgccaactactgccaagccagtcaatcccctttagtcacaatcatctcacaaactcctctttttctgcaggtgagagtgtacactccaaagaggctgttccatcaactggaggctgccaaggaggagttcatccgggcaacggtgggcatctggaaggagcagaaaatactgcttccaaagctcgtcgaggcgtatgcgaaagacgtcaagctctcgtcgcagggccttgtcgacatggtgcagcgctacctcccggagagcttgaggatggcaatgcagaagtgccagcagagcagatccagcaagatcatagaatgggtgcctcataacctgaatttccggtatctgctgtccagggacctggcatttcctcacctgaactga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0769000, RefSeq:Os03g0769000