Os03g0771500

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Revision as of 13:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0771500| Description = Knotted1-type homeobox protein OSH43| Version = NM_001057942.1 GI:115455612 GeneID:4334261| Length = 5645 bp| Defin...")
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Gene Name

Os03g0771500

Description

Knotted1-type homeobox protein OSH43

Version

NM_001057942.1 GI:115455612 GeneID:4334261

Length

5645 bp

Definition

Oryza sativa Japonica Group Os03g0771500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32815278..32820922

Sequence Coding Region

32815574..32815888,32816022..32816159,32816286..32816394,32820136..32820347,32820450..32820701

Expression

GEO Profiles:Os03g0771500

Genome Context

<gbrowseImage1> name=NC_008396:32815278..32820922 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:32815278..32820922 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagcttcgccagtctcgcaggaggtggcagcagcagcaccacagctcggttgccggagctgatctcgccggagaacccggaccacatctcgccgcccccgttgctgtaccagctgctcgccggcccggagtcgtcggcgcggcagcatgggcatgatgggcatcaccacggcggcggtggcggcgaagcagcagcagcagctgtgcagggacaggtctcgccggcaggcgcggaggcggcggtcaaggccgagatcatgtcgcatccacagtactcggctctcctagccgcctacttaggctgcaaaaaggtcggggcgccgccggatgtactgaccaagctcacggctgtgccggcggcgcagcagctggacgaagccgacggccaccctcgtcgccggcacgagccacagcgtgatgacgacccggatcagctcgatcagttcatggacgcgtactgcagcatgctgacgaggtacagggaggagctggagcggccgatcctggaagccgcggagttcttcagcagggtggagacgcagctcgattcgctcgctgagagtaattgtgaaggcacgggatcatcagaggaagagcaagaccctagtgacaagcagctgaagcaccagcttctgaggaagtacggtggctcgttgggcgatctccggcaggtgttctccaagaggaccaagaaagggaagcttcccaaggaggccaggcagaagcttctgcactggtgggagctgcactacaagtggccctatccctccgagatggagaagatgacgctggcgcagacgacggggctggaccagaagcagatcaacaactggttcatcaaccagaggaagcggcactggaagccgacgccggtggcaggcacggccttcccgacgatggaagctgccggaggcggcttccgacactccggccacggcggcggccttgcggcggcggcggcgctgccgctgtacatgggcaggccgttcgttgtggacggcatgtaccggctcgggtcttga</cdnaseq>

Protein Sequence

<aaseq>MESFASLAGGGSSSTTARLPELISPENPDHISPPPLLYQLLAGP ESSARQHGHDGHHHGGGGGEAAAAAVQGQVSPAGAEAAVKAEIMSHPQYSALLAAYLG CKKVGAPPDVLTKLTAVPAAQQLDEADGHPRRRHEPQRDDDPDQLDQFMDAYCSMLTR YREELERPILEAAEFFSRVETQLDSLAESNCEGTGSSEEEQDPSDKQLKHQLLRKYGG SLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYPSEMEKMTLAQTTGLDQKQI NNWFINQRKRHWKPTPVAGTAFPTMEAAGGGFRHSGHGGGLAAAAALPLYMGRPFVVD GMYRLGS</aaseq>

Gene Sequence

<dnaseqindica>297..611#745..882#1009..1117#4859..5070#5173..5424#cactgttgctgctgctgctgctgcttgcaaacactgaatagcctaacctcttcattaatttctcgctctgattttgacgttagaacaaagctaagatgggccatacgtatactaggaggagtaccatcatattcatcttctttctagcttcctctcctcttcacattccctgcatccatccatctcaaccaccaccacctcatttcaggagatcatctcctccttttctttgctagggtttgtttgccataactactatctatcgcctcttcttcacctcacctgtcctgtcggccatggagagcttcgccagtctcgcaggaggtggcagcagcagcaccacagctcggttgccggagctgatctcgccggagaacccggaccacatctcgccgcccccgttgctgtaccagctgctcgccggcccggagtcgtcggcgcggcagcatgggcatgatgggcatcaccacggcggcggtggcggcgaagcagcagcagcagctgtgcagggacaggtctcgccggcaggcgcggaggcggcggtcaaggccgagatcatgtcgcatccacagtactcggctctcctagccgcctacttaggctgcaaaaaggtgtagtagctaagctagcagatgcatatatttaaacccatgcagatacagacgacaacacgccatgtgctgaccaagctcacggccgtgccggatgtactgaccaagttgattttgttggtttttttatcaggtcggggcgccgccggatgtactgaccaagctcacggctgtgccggcggcgcagcagctggacgaagccgacggccaccctcgtcgccggcacgagccacagcgtgatgacgacccggatcagctcgatcagttcatggtatcaacatatatagatcatcaactcctttgctcgcatgcgtgcatatatatagacagacacacacacatatatatccactgttcttctgatcgatcgacatgggatctgatcttgtcatcacaggacgcgtactgcagcatgctgacgaggtacagggaggagctggagcggccgatcctggaagccgcggagttcttcagcagggtggagacgcagctcgattcgctcgctggtgagtattttatacgcctcttctctacaaagatttgcagcttgccatattgggaaatgccgaaatggtatctcactttatggaattggagttagttttttttttgtcacctctttggactcatgtggctgttgcagcagtatttcttaaggctgctaatctcaggctttaatatgtttattagggtgggggataagggttgcatgcattagatcagtttcgtaataattggagcttaattaagtatacatgaccagtatgataagcatcatgaggtcacacggtgaggctgcgagctgagctccagggtttccaaattgccatatatgcatggctctcctactttccagtctccacttcctcctgtgcaatacaacgatggtgtcctccctctgtcgtacaatcttaatgaatcatacaaaggaataattaatactggagcacatgcagttctttgaacttgtaccttgtactgacgttattttttttcctctgattttcttttatttttagaattaagacccaaccttgctgacattattagcttctaattaaagagttcagtgcatgcatcacaagtgatgaactgacaggagaaagctctcagcacgttctgtccccaatatctctgcaggtccttgtctaacctacatttttgctctcttgtcatgtcttccgctggtagtcacagagaaatggctagacgatctttgttttcaacttagacgatttatgttaagattaagggccaagaggtaaattaaacgaaccatcaaagtttgcagaacatagtggccaaattgaggtgtaagtaacatctagctggttgaaaacatgagtggcggtggatgacagaatgagtggccggtgggcctattgtcattgtgcctccgtgagtgtaattggtttaccgacctcaaatcctggatcgagtcttggctgtcggacatgaatgggcactgttagtaccctgtgcactttgtctcatggcctggatatatagttactggagtggggtaaggatccagctatatattagacaattgataagtgtgtatgaccatctagttgtgtcctttcaagtgcagttgtttccgaacattattgagcactttccgtagccatacgaatagatttccagatcagaactctttcttatatatacagacatcaatcgagtgccaaataattgaaagaatgaaagcagcatagtgaccagcatgcatatcatattgtgttttgttgaaacatagttcaataattttgtctatatgaactagtgtagttttttacactggtaattgcatatatacaaggtggtgtttcataagacgactaatatggcaaaattatgaaattcactatccgtacaaatcctggataatatataggagtacatatatggaagaattatctggtttcttatatatttagtctgccaaaatgtcattcagctattcccctaccgatgaggcatttttttttgtgtctacacatatattcctgtctacagatggtctcttttggaattgatttttgtttctaatttgttggacagatggtctcttttggaattgattttttttctaatttgttggatatttattggactggtgcaacaattcatcccctcacacatgatttgatctattccatatactcagatgaattgttggaatcctactatttcaccagtatggatcatgttcagatattagctattgacttttagatatgacgtttgaaatataaattattttttgtgacttgtttattattaaaggtacatcaaacataacttataattttacatatttgcactatttttttttgtaaggtgaatggacaaacgtcatgttcaaaagtcagcaatgtcatatatttaaaaaaggagggaggattgcattaggagttcataagagtgataaacacggcttgttaataagtgaatgattatctaacttaacatatatatcatccacaacaatgaaaatacagtctatgcacacattactttaaccagtgtcttgtactagcatcaatactaactagactttgcactcttttgatgtcatttcgtctcaatgttgtcatttcagaaatatccatttaactgttcataagtaacacttttcattctgttaattactttttgaatcatattctggttgcatgctgctctactgtctggaaatattccaatgtcaacagaatgtgtatgtgcacacatgcagcataaatagctcccagaaagtttcaaataaatttttatattggatggaatttgaactgcatactataaatattatcctatgaattgtaggagttgtgtaatatatttgttatttatattttttttaatcttctgaaatcaagggtatgaataatttttttagtggaactagtgtagtctttgtaagtatttggccttatttcattgttaaaatcaatagttttgtctatatgaattagtgtagttttttacactagtagttgcatatatacaaggtggtgtttcaaaagacgactaatatggcaaaatttatgagattcactatccgtacaaatcctggatctatatattacaatcgctttgagatgaatgcaaattaggatgggcacaattttttcatagcatggtggaatggtttctcttgtcaccatcgttttgaactcatctttattatgtgcccgctaattactccctcctttctaaattgattatcatgtaatagaaatcaaaatttcttaaattgatcatcatataactgcatggagacggatttcatcggaatacaattaatacaacatgggagaatgcgtgcatgctagggtggagtaattggcatggagttttaatcgatgtatgcattgtgggagaatgtgtgcattgtgtcttgattgatgtgatttaaattattttttggtcttggtgcgtaaatttatatgatgatcaatttgagaaggagacagtatattttaaaaccgttctgtctaagtgttcacacaagatcactgatttttttttttgccttcgaataaacagaacacaagcaggccttgtaatatttagtatatattcttgtcatagcttttccctacgaatcaaaatgaatatccttgtctcaaattgaacggtatggcggctgtttgactagtctagttttctgcttggaatttggaaataccgtggcctgtttggtggagctttagattctgataatcagctgtttggtagcaagcttctgaaaatctggaaatgctctgaaacccagcttctccagcttctggcttcttagttcaattttcagaatctgtaactacagattctcagaagctgtggactgtttgggacagcttctagcagaagtagcttttgggaaaagttgcagctggaagaagctcctccaaacagggcctgtctagctgagcaaggacaattattgggtgcacagagtgtacaacatgttcaggccttcagggttgcactgttgcttacttcgatacactcctacctagtaaacacaaagaattaattgactgactggtggcctggtggggctgaccgattgagtaatacacagtactaccattatactctatgcataatctattcgatctcccacacctcccttcatatgaggtttacctgctgtgacgcacgcagtcatgtaatttttaattattttgatagaacatcatgttgaacaattaacctttttgagctgctgtttttaacagagagtaattgtgaaggcacgggatcatcagaggaagagcaagaccctagtgacaagcagctgaagcaccagcttctgaggaagtacggtggctcgttgggcgatctccggcaggtgttctccaagaggaccaagaaagggaagcttcccaaggaggccaggcagaagcttctgcactggtgggagctgcactacaagtggccctatccctccgtacgcacgcatcacatcccgtttgatcaattcaaccacattttctgcaccaaattaactcgtttgaaaatgcgtgaaatttacggggttgtgtatgagcaggagatggagaagatgacgctggcgcagacgacggggctggaccagaagcagatcaacaactggttcatcaaccagaggaagcggcactggaagccgacgccggtggcaggcacggccttcccgacgatggaagctgccggaggcggcttccgacactccggccacggcggcggccttgcggcggcggcggcgctgccgctgtacatgggcaggccgttcgttgtggacggcatgtaccggctcgggtcttgaagcctctggggatcgcatggtgtttgcatggtgttttttgcttggtaaatatttgctagcagcttcccatgatcagcctgtgggatggtgaaatggaagaactgatgaatcttcatcacgatctttcctctcatttttttttctttggtgtgtgataaaagctcagatgtaccacgtactactgtctgcttctttgcaaatggatatgtaattgaaagctt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0771500, RefSeq:Os03g0771500