Os03g0772100

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Revision as of 13:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0772100| Description = Similar to Knotted1-interacting protein| Version = NM_001186727.1 GI:297722584 GeneID:9271080| Length = 4886 bp| De...")
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Gene Name

Os03g0772100

Description

Similar to Knotted1-interacting protein

Version

NM_001186727.1 GI:297722584 GeneID:9271080

Length

4886 bp

Definition

Oryza sativa Japonica Group Os03g0772100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32837398..32842283

Sequence Coding Region

32837398..32837706,32837903..32838049,32838183..32838261,32841661..32842283

Expression

GEO Profiles:Os03g0772100

Genome Context

<gbrowseImage1> name=NC_008396:32837398..32842283 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:32837398..32842283 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagcttcgccagtctcgcaggaggtggcagcagcagcaccacagctcggttgccggagctgatcccgccggagaacccggaccgcatctcgccgcccccgttgctgtaccagctgctcgccggctcggcgtcgtcggcgcggcatgggcatggacaccaccacggcggcggtggcggcgcagcagcagcagctgtgcagggactacaggtctcgccggcgggcgcggaggcggcgatgaaggccgagatcatgtcgcatccgcagtactcggctctcctcgccgcctacttaggctgcaaaaaggtcggggcgccgccggatgtactgaccaagctcacggccgtgccggcggcgcagcagcagctggacgcagccgacggccaccctcgtcgccggcacgagccacggcgtgatgacgacgtcccggatcatcagctcgatcagttcatgcatgctgacgaggtacagggaggagctggagcggccgatcctggaagccgcggagttcttcagcttgattcgatcgctgacagtaattgtgaaggcacgggatcatccgaggaagagcaagacacgagctgtcctgaggctgaggagatcgaccctagtgacaagcagctgaagcaccagcttctgatgaagtacggtggctcgttgggcgatctccggcaggcgttctccaagaggaccaagaaagggaagctccccaaggaggccaggctgaagcttctgcactggtgggagctgcactacgacaaatggccctatccctccgtacgcacgcatatatatgcttcccatttgatcaattcaaccacatttttctgcaccaaactcgatcttatgaaaatgcgtgaacttctcgggtgtacatgtgtgtatgagcaggaggtggagaagatgacgctggcgcagacgacggggctggaccagaagcagatcagcaactggttcatcaaccagaggaagcggcactggaagccgacgccggtggcaggcatgaccttcccgacagtggaagctgccggaggcggcttccgacactccggccacgacggcggccttgcggcggcggcggcggcggcggcgctgccgctgtacatgggcagctggccgttcgttgtggacggcatgtaccggctcgggtcttga</cdnaseq>

Protein Sequence

<aaseq>MESFASLAGGGSSSTTARLPELIPPENPDRISPPPLLYQLLAGS ASSARHGHGHHHGGGGGAAAAAVQGLQVSPAGAEAAMKAEIMSHPQYSALLAAYLGCK KVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPRRDDDVPDHQLDQFMHADEVQGG AGAADPGSRGVLQLDSIADSNCEGTGSSEEEQDTSCPEAEEIDPSDKQLKHQLLMKYG GSLGDLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPSVRTHIYASHLINSTTF FCTKLDLMKMRELLGCTCVYEQEVEKMTLAQTTGLDQKQISNWFINQRKRHWKPTPVA GMTFPTVEAAGGGFRHSGHDGGLAAAAAAAALPLYMGSWPFVVDGMYRLGS</aaseq>

Gene Sequence

<dnaseqindica>1..309#506..652#786..864#4264..4886#atggagagcttcgccagtctcgcaggaggtggcagcagcagcaccacagctcggttgccggagctgatcccgccggagaacccggaccgcatctcgccgcccccgttgctgtaccagctgctcgccggctcggcgtcgtcggcgcggcatgggcatggacaccaccacggcggcggtggcggcgcagcagcagcagctgtgcagggactacaggtctcgccggcgggcgcggaggcggcgatgaaggccgagatcatgtcgcatccgcagtactcggctctcctcgccgcctacttaggctgcaaaaaggttagctagctagcagaagtatatatattttaaacccatgcagacacagaggttgtgtttagtttcacgtcaaaattataagtttaaaaaaattagaacgatacgatagaaaaattaaaagtttgaaaaaaaaagttagaatctaaacacgccatgtgctttgtttgactggttcattttgttggatttttatcaggtcggggcgccgccggatgtactgaccaagctcacggccgtgccggcggcgcagcagcagctggacgcagccgacggccaccctcgtcgccggcacgagccacggcgtgatgacgacgtcccggatcatcagctcgatcagttcatggtctcgacatagcaattaatttgctcgcatgcatgctagctgcttagtacatgtgttccgctgttcttctgatcgatcgagattcgagacacggggatctgatcttgttattatcacaggacgcgtactgcagcatgctgacgaggtacagggaggagctggagcggccgatcctggaagccgcggagttcttcagcttgattcgatcgctggtgagtactccctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttttaccgttcgtcttattaaaaaaaatttgtgaaatatgtaaaactatatgtgtacatgaaagtatatttaacaatgaatcaaatgatgtgaaaagaataaataattacttaaattttctgaataagacaaatggtcaaacacgtactaaaaagtcaacggtgtcaaacattttgaaacggagagagtattttatacgcctcttctatacagaaatttccatattgggaaatggtatatcactctatggctgattggagttagtcttttttttttcttggtcacctcctctttggactcgtatggttgttgcagctgttatttcttaaggctgctaatttgaggctttaatttgtttattagggtaggggagataagttttgcagcctagcttgtcgcatgcaattagatcactttcacaaaaattggagcttaacaaagtatacttgagcagtatgatcgataaactagcaagcatatcatgaggtcacacggccggtgaggctgtgagctgagctccagggtttccaaattgcatgccatgcatggttctcctgctttcctgtccccaatatctctgcaggtccttgtctaacctacatttttgctctcttatcatgtcttccgctggtagtcacagagaaatggctagacgatctttgttttcaacatagacgatttatgttactattaagggccaaaaggtaaattaaatgaaccatcaaagtttgcagaacatagtggccaaattgaggtgtaagtaacatctagctggttgaaaacatgagtggcggtggatgacagaatgagtggccggtgggcctattgtcattgtgcctccgtgagtgtaattagtttacggacctcaaatcctggatcgagtcttggctgtcggacatagtaccctgtgcactttgtctcatggcctggagtggggtaaggatccagctatatatattactcgtagactattgataagtgcgtattaccatctagttgtgtcctttcaaatgcagttgtttccaaacattattgagcactttccatagccataggaatagatttccagatcagaactctttcttatatatatacagacatcaatcgagtgccaaataattgaaagaatgaaagcagctagcatggtgaccagcatgcatatcatattgtattttgttgaaacctagttcaataattttgtctatatgaactagtgtagttttttacactagtaattgcatatatacaaggtggtgtttcataagacgactaatatggcaaaatttatgaaattcactatccgtacaaatcctggataatatatatatatggaagaattatctggtttcttatatatttagtctgcaaaaatgtcattcagctattcccctaccgatgagacatttttttttgtgtctacacatatattcctgtctacagatggtctcttttgagaattgaattttttttctaatttgttggatatttgtttgactggtgcaacaattcatccccttacacatgatttgatctattccatatactcagatgaattgttggaatcctactatttcaccagtatggatcatactaagatattagctattgacttttgtttgatcgttcgtcttattaaaataatatataaatataaattattttttgtgacttgtttattattaaaggtacatcaaacataaattatatttttacatatttgcactatttttttaaggtgaatggacagacgttatgttcaaaagtcaacaatgttatatatttaaaaaaaaggaggaggattgcattaggagttcgtaagagtgataaacacggcttgtttcttagtggatgattatctaacttaacatatatatcatccacaacaatagagaaaatatagtctatgcacacatttactttaacctgcagtgtcttgtactagcatcaatactaactagactttgcatccttgatgtcatttcttgtctcaatgttgtcatttcagaaatatccatttaactgttcataagtagcacttttcatgctgttaattactttttgaatcatattctggctgcatgctgctgtactgtctggaaatattccaatgtcaacagaatgtgtatgtgcacacatgcagcataaatagctcccagaaagtttcaaataaatttttatatttgatggaaaatttgaactgcatgctatatatattgtcctatgaattgtagttgtgtaatatatctgttatttatatgattttttttatcttctgaaatcaagggtacggtgaataaattttagtggaactagtttagtctttgtaagtatttggcgttatttcatttttaaaatcaataattttaattgtctatatgaactagtgtagtttttacactaataattgcatatatacaaggtggtgtttcataagacgactaatatggcaaaatttatgaaattcactatccgtacaaatcatggatctatatattacaatcgctttgagatgaatgcaaattaggatgggcacaattttttcatagcacggtggaatggtttctcttgtcatcatcgttttgaactcatctttattatgtgcctgctaattatattttaaaaccgttctctaagtgttcacacaatatcactaaatttttatttttttatttttgccttcgaataaacagaacacaagcaggccttgtaatatttagtatatattcttgtcatagcttttccctatgaatcaaaatgaatatccttgtctcaaattgaacggtatgacggctgtttgactagtctagttttctgcttgaaatttggaaatactgtgtttagatgagcaaggacaattattgggtgcgcagctgagtgtacaacatgttcaggccttcagggttgcactgttgcttgcttcaatccactaggagtcctagtaaacacaaagaattaattgactgactggtggcctggtggggctgaccgattgagtaatacacagtactaccattatactctccggggcaatctaaggccgggtttagttctaaaatttttctttaaacttttaactttttcatcacattaaaacttttctacatacataaactttcaaacttttccgtcacatcgttccaatttcaacaaaacttccaattttagcgtgaactaaacacaccctaaccagaattgtaactatgcataatctactcgatctctcacacctcccttcatatgaggtttacctgctgtgacgcacgcagtcatgtaattttttaattattttgatagcacatcatgttaaacaataattaacctttttgagctgctgtttttaacagacagtaattgtgaaggcacgggatcatccgaggaagagcaagacacgagctgtcctgaggctgaggagatcgaccctagtgacaagcagctgaagcaccagcttctgatgaagtacggtggctcgttgggcgatctccggcaggcgttctccaagaggaccaagaaagggaagctccccaaggaggccaggctgaagcttctgcactggtgggagctgcactacgacaaatggccctatccctccgtacgcacgcatatatatgcttcccatttgatcaattcaaccacatttttctgcaccaaactcgatcttatgaaaatgcgtgaacttctcgggtgtacatgtgtgtatgagcaggaggtggagaagatgacgctggcgcagacgacggggctggaccagaagcagatcagcaactggttcatcaaccagaggaagcggcactggaagccgacgccggtggcaggcatgaccttcccgacagtggaagctgccggaggcggcttccgacactccggccacgacggcggccttgcggcggcggcggcggcggcggcgctgccgctgtacatgggcagctggccgttcgttgtggacggcatgtaccggctcgggtcttga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0772100, RefSeq:Os03g0772100