Os03g0773800

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Revision as of 13:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0773800| Description = Similar to Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) (mbNAD-MDH)| Version = NM_001057954.1 GI:1154556...")
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Gene Name

Os03g0773800

Description

Similar to Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37) (mbNAD-MDH)

Version

NM_001057954.1 GI:115455636 GeneID:4334274

Length

3622 bp

Definition

Oryza sativa Japonica Group Os03g0773800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:32936752..32940373

Sequence Coding Region

32936943..32937015,32937124..32937218,32937302..32937391,32937467..32937502,32938142..32938225
,32938326..32938415,32938529..32938843,32939777..32939986,32940068..32940139

Expression

GEO Profiles:Os03g0773800

Genome Context

<gbrowseImage1> name=NC_008396:32936752..32940373 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:32936752..32940373 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcccgactccgcctcccaccgcatcgcccgcgtcgccgcccacctcagcccgtcgccgcgcccccagatggaggagggggtgaggccggcgccatgcagggccaagggcggcgcgccggggttcaaggtggccgtgctgggcgcggcgggagggatcgggcagccgctgtcgctgctcatgaagttgaacccgctcgtctctgtgctccacctctatgatgtcgtcaacacgcccggtgtcaccgccgatgtcagccacatggacaccaccgccgtggtccgtggtttccttgggcccaaccagcttgaggcagcacttacaggaatggatcttgtcattatccctgctggtctcccaaggaaaccaggaatgacaagggatgatttgttcaacaaaaacgctgggattgttcgctcactttgtgaaggcgttgccaagtgctgtccaaatgcaattgtgaacttgatcagcaacccagtgaactcaaccgtccccattgcagcagaggttttcaagaaagctggaacttatgatcccaaacgtctccttggagttacaacactggatgtagcaagggcaaacacctttgtggctgaagtacttggaattgacccaaaagatgtcaatgttccagttgttggtgggcatgctggagtgactatattacccctcctctcccaggtccaccccccatgctcatttaccccagatgaaatcagctatttgactaaacgcatacagaatggtggcacagaagttgttgaggcaaaggcaggagcaggctctgcaactttgtcaatggcttttgctgcagcaaaatttggtgatgcatgcttgcgagcaatgcgtggtgatgctggcgttgtggaatgttcatatgttgcatctgcggtgaccgagttgccgttctttgcaacaaaagtgaggttaggtcgtgctggagccgaagaggttctccctctggggccgttgaatgattttgagagagctggcttggagatggcaaagaaagagctgatggagagcattcagaagggcatcgatttcatgaacaagtga</cdnaseq>

Protein Sequence

<aaseq>MQPDSASHRIARVAAHLSPSPRPQMEEGVRPAPCRAKGGAPGFK VAVLGAAGGIGQPLSLLMKLNPLVSVLHLYDVVNTPGVTADVSHMDTTAVVRGFLGPN QLEAALTGMDLVIIPAGLPRKPGMTRDDLFNKNAGIVRSLCEGVAKCCPNAIVNLISN PVNSTVPIAAEVFKKAGTYDPKRLLGVTTLDVARANTFVAEVLGIDPKDVNVPVVGGH AGVTILPLLSQVHPPCSFTPDEISYLTKRIQNGGTEVVEAKAGAGSATLSMAFAAAKF GDACLRAMRGDAGVVECSYVASAVTELPFFATKVRLGRAGAEEVLPLGPLNDFERAGL EMAKKELMESIQKGIDFMNK</aaseq>

Gene Sequence

<dnaseqindica>3359..3431#3156..3250#2983..3072#2872..2907#2149..2232#1959..2048#1531..1845#388..597#235..306#ggcggagaacgcaacgagatgagatgagcttcccggggagatgggaggagagctagctagccgccgaggctgagctcgcctccccgcctcccgatccccgcgacccctcgcagccacacccccaccggataacgcaacgccttccccctcccccatcaaaacccccctcccccctcgcgcgccaactgctctcctcctccgccgccgccgccgcaaccaaccagccagccagccatgcagcccgactccgcctcccaccgcatcgcccgcgtcgccgcccacctcagcccgtcgccgcgcccccaggtgcgccgcgaaacagttcatctctcgctctctcgttgcgtgatgtgaggggatgaccaatctgtgcgtgtgtgtgtgcagatggaggagggggtgaggccggcgccatgcagggccaagggcggcgcgccggggttcaaggtggccgtgctgggcgcggcgggagggatcgggcagccgctgtcgctgctcatgaagttgaacccgctcgtctctgtgctccacctctatgatgtcgtcaacacgcccggtgtcaccgccgatgtcagccacatggacaccaccgccgtggtaacctactcattccatcccgttcgactgctagcttattgtggtagtattgtactagcacctggtctgcacatcggcagtgatgattgatgcctgaaatcacttttcagtttctttcccttgcagtctgtttggttggagggagtttctaggagggattgggagtttaaagggatgaggctattaactgttttgtttggttgggggacatgggaattttggtgggatgaggatggggaattgaggaatgaactccctccttttcaatacctggttaggggcaggtaattgggagggaattcctcctttacttcgcctaaacaaatctcagccatccgttttcattaatgatctaatctccaactaaactccctatcaatttccaccacctctaccaaacaagagactgggatgaaaaatcaaattcacatcttaatctcaccatcaattccctcgtgtaaactcccaatccccttccctcaagttgccaaacaagccttgtagttaaccaaacgacttgccaacaatgagatctcgctttttctattgttccagtgaagtccaaaaaatatatatagaaaactatgataacatcttatcttgtgttgaaaaagaaagccaccttatgttagttccttttcagtttaatcattatcaacagtaaatggtactgtaggtaaacctcttgttattgaaatttttaattcatttataaaaaaaggaaaaaaagagaaaagatttgcctgcaagctaaaaaggatagaagtgaaaaaaatgataattttttacttgcaacttacaattgcactccactattttcagatagttcgaatggattactgattagttatttatcgaatggattactgattagttatttatctgtgcatagatactgatgtaacaaataactgtacccaaattcccttgtaggtccgtggtttccttgggcccaaccagcttgaggcagcacttacaggaatggatcttgtcattatccctgctggtctcccaaggaaaccaggaatgacaagggatgatttgttcaacaaaaacgctgggattgttcgctcactttgtgaaggcgttgccaagtgctgtccaaatgcaattgtgaacttgatcagcaacccagtgaactcaaccgtccccattgcagcagaggttttcaagaaagctggaacttatgatcccaaacgtctccttggagttacaacactggatgtagcaagggcaaacacctttgtggtatgcattctaacaaattgttttcatatcatctcttagataacattaagatacatgtaaatactgtgtactgctctttgaccataaaatttttctttttctactgcttataggctgaagtacttggaattgacccaaaagatgtcaatgttccagttgttggtgggcatgctggagtgactatattacccctcctctcccaggtattattccatcaatattagcgcatgtaaacactaattatccgcatttcaacttctgcaaatataataacttgctaatccaagacctgtctctctgcaggtccaccccccatgctcatttaccccagatgaaatcagctatttgactaaacgcatacagaatggtggcacagaagttgttgaggtacaatgcatgcatattcgaagtgctgaaattagccttgatgcacgtgattaattttgccccaactattctctttgtttgattttctacaaacagtacatgcatatgtgcacatcttatttacacaaaaatctgcataaagctaccataatgtagttatttgtgtggagttgtctaatctagcccaaatttcttatttatattcagaagcaatgtctatatgccaagttctagtcctgttgattcaaaatgtctgatttcaattaacaaaccttctagctctgtctaggttccagaaagaaaaaaaaatataactatgaatttgtgatttatttaatgtcaaatattgcctcaactataatttcgttccccatagccttagtaggccaagttactaggtgttgatgagcaaacgtttttgagtttttaggaagaaaatttcagctcctacactacaaatgtaacggatgcccttaacggagactgaagaaagctgttgataacagtagatagcggtatttgcatattactttagttacacgtcattacatgtctgaaactatggggattctttttttcagttttggtgtttctaattatttggtcatacatataatgttccttttgtttgtgattcaggcaaaggcaggagcaggctctgcaactttgtcaatggtaggttatatggctgcttattctttgtgaatagtatccgagttataaatgcatactgacagaaaaccatctcaggcttttgctgcagcaaaatttggtgatgcatgcttgcgagcaatgcgtggtgatgctggcgttgtggaatgttcatatgttgcatctgcggtatgcttacaccatccaaacattcatccttcctatcaaccgataacaccatcttatgattattctcattttctttcaactaggtgaccgagttgccgttctttgcaacaaaagtgaggttaggtcgtgctggagccgaagaggttctccctctggggccgttgaatgattttgagaggtacattagttgtatctaaatattctctttcaaatgcagttgcctgcaaataccatccaaaaataattggtgtgcttaatgtgtgttttaacttatttgacacgacagagctggcttggagatggcaaagaaagagctgatggagagcattcagaagggcatcgatttcatgaacaagtgaggtgtatgaagggacaaagttatgcatacatgtaaagagtgtcctatatatagtgctcatatacatgtaaaattttcgccgggctcatatacatgtaaaatcacttctgtaaaacgaccgtgaaatgctaattaccctttagttgcactaaacctttttttcctgatcatggaataaaaatcctatactag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0773800, RefSeq:Os03g0773800