Os03g0777700

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Revision as of 13:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0777700| Description = FAR1 domain containing protein| Version = NM_001057977.1 GI:115455682 GeneID:4334298| Length = 3178 bp| Definition ...")
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Gene Name

Os03g0777700

Description

FAR1 domain containing protein

Version

NM_001057977.1 GI:115455682 GeneID:4334298

Length

3178 bp

Definition

Oryza sativa Japonica Group Os03g0777700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33102671..33105848

Sequence Coding Region

33102806..33102916,33103202..33103282,33103374..33103445,33103585..33103709,33103785..33105798

Expression

GEO Profiles:Os03g0777700

Genome Context

<gbrowseImage1> name=NC_008396:33102671..33105848 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33102671..33105848 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagtagttgctggacctggaggagaaccaaaagttggaatggttttcctgaatgaagacaaggcctatgactgctatgtcacctatgctggaactgtggggttcagcgtccgaaaaggatggttggaaaaaacagcaacaaatactacaaaatctcgggcatatgtctgttctaaagagggattccgctctaaaagtgtcagtactgatcccaagaagccacggccagaaacaagaactggttgtctggcacacatgactattaaaatcactgtgagtggcaaatatgtagtgactgagtatgtggctgatcataatcatgatcttgaaactcctttggtggacatccaggttctgagatcacataagttattagcaaagttacagcagcctccagatccaccaagagttgttttgataccaaatgattataaaaattatgtaaggacaaggcacacaaaagatatgcaattaggtgatacccaggcaatttatgaatatttgcagaggaagaaaggtgaacatccttctttcttttatgccatccaagtggatgaagatgaccagttgacaaatgtattctgggcagatgttaagtcgattctggattaccactactttggtgatgtactgtgtgttgacacaagatatagcacaagtgatcatagtaggcctctattgttgtttattggtgttaaccatcataagcagccagtcatatttggtgcagcattggtttatgatgaatcagttgaatccttcaaatggttgtttgaaactttcaaatctgcaatgagtggcaagcaaccaaaaacagttatgatcgatcaatctacagcaatcagtgaagcagttgcttctgtttggccaaggaccacccagcgcttttcactgattcatttatataaaaatgccactaagatattaagggatgccttccaagcctcggaaacttttgcagacgattttagcatgtggttgtatggctatgaggaggagggggatttcttgtcaagctgggaaatcctctcagataagtacaatctaaaggacaatgagtggctaggtaaattgtatgcagatagagaaagatgggctttaccttatggacgtgattcattctgtgcagatattgcagccgcactccgaagtgataataacactgatgctatactggcagatcttctaaagaaagaaacggatttcccatccttctttaacaattatgacaaacttttggagaacaaacgcctagctgaacaacaagctgactaccttggggttcaaatggcacagagagtagcacctctgcggatgctttggcaagctgctaatgcatatactcctacactttttgagatgttcaggttggaatttgaactgaccttgacttgcatggcttattgctgtggtgagattggaccaatatctgagtatgaggtaactgtcaaaaacaggccccgtgaccattttgttagatttgactcatcagaatgtatggttgtttgtagctgtaagaaatttgaattcacaggtattccatgttgccatgtactgaaagttcttgaggtaagaaatattaaagaacttccaccacactacattttgaaaagatggagaaaggatgctcagagtgaatctccgagggagaactatggttttgaagctgtagatgaagatcccaggttcttgttgtctaaacgatacagcatgttgtatcgaacgttctacaaaattgcagcaaaagctgccgaaaatattgaagcttatacatacatggagagccaatgtgatcagtttatagagcaagttgaacttctattgcaagcaaagttacatgataaatcttcattgagcactatactgaaagttcaacagccaaatttgtttccgaatgaagccagcaacagtgaaactcgcagagtaagtagtaagaaaattaaaaatgtagatacgcgtcggcagcagcaaagtcctcttcaatcaaataagaagaaaaagggtagacaaggtctaccggagcctgaggaggctgaagttccgcttagggttgatcctcctacaatatcaaatgacattccaaatcatctgagaactccaaccagtcaatttcttgcaacaagccatataatgcaggcaccgtatattgcacagcaattcggacttagctctcttcagggatttcctggcatatcaccatttgggcagttgcaggaaccagcacctgctcctctccagcaacctcatctacagcaaccaccctttcatagcggtccacaaatcccccaggccccacctccggacatccagtcattgcagtttcttagcagcaatcctcaactgggtcaccaagccacggatcaaagccagtacaccattccagtctgggatttcctgtga</cdnaseq>

Protein Sequence

<aaseq>MEVVAGPGGEPKVGMVFLNEDKAYDCYVTYAGTVGFSVRKGWLE KTATNTTKSRAYVCSKEGFRSKSVSTDPKKPRPETRTGCLAHMTIKITVSGKYVVTEY VADHNHDLETPLVDIQVLRSHKLLAKLQQPPDPPRVVLIPNDYKNYVRTRHTKDMQLG DTQAIYEYLQRKKGEHPSFFYAIQVDEDDQLTNVFWADVKSILDYHYFGDVLCVDTRY STSDHSRPLLLFIGVNHHKQPVIFGAALVYDESVESFKWLFETFKSAMSGKQPKTVMI DQSTAISEAVASVWPRTTQRFSLIHLYKNATKILRDAFQASETFADDFSMWLYGYEEE GDFLSSWEILSDKYNLKDNEWLGKLYADRERWALPYGRDSFCADIAAALRSDNNTDAI LADLLKKETDFPSFFNNYDKLLENKRLAEQQADYLGVQMAQRVAPLRMLWQAANAYTP TLFEMFRLEFELTLTCMAYCCGEIGPISEYEVTVKNRPRDHFVRFDSSECMVVCSCKK FEFTGIPCCHVLKVLEVRNIKELPPHYILKRWRKDAQSESPRENYGFEAVDEDPRFLL SKRYSMLYRTFYKIAAKAAENIEAYTYMESQCDQFIEQVELLLQAKLHDKSSLSTILK VQQPNLFPNEASNSETRRVSSKKIKNVDTRRQQQSPLQSNKKKKGRQGLPEPEEAEVP LRVDPPTISNDIPNHLRTPTSQFLATSHIMQAPYIAQQFGLSSLQGFPGISPFGQLQE PAPAPLQQPHLQQPPFHSGPQIPQAPPPDIQSLQFLSSNPQLGHQATDQSQYTIPVWD FL</aaseq>

Gene Sequence

<dnaseqindica>2933..3043#2567..2647#2404..2475#2140..2264#51..2064#agggtgagagtaaagaagatgaaataattgaaggagaaccagatccagaaatggaagtagttgctggacctggaggagaaccaaaagttggaatggttttcctgaatgaagacaaggcctatgactgctatgtcacctatgctggaactgtggggttcagcgtccgaaaaggatggttggaaaaaacagcaacaaatactacaaaatctcgggcatatgtctgttctaaagagggattccgctctaaaagtgtcagtactgatcccaagaagccacggccagaaacaagaactggttgtctggcacacatgactattaaaatcactgtgagtggcaaatatgtagtgactgagtatgtggctgatcataatcatgatcttgaaactcctttggtggacatccaggttctgagatcacataagttattagcaaagttacagcagcctccagatccaccaagagttgttttgataccaaatgattataaaaattatgtaaggacaaggcacacaaaagatatgcaattaggtgatacccaggcaatttatgaatatttgcagaggaagaaaggtgaacatccttctttcttttatgccatccaagtggatgaagatgaccagttgacaaatgtattctgggcagatgttaagtcgattctggattaccactactttggtgatgtactgtgtgttgacacaagatatagcacaagtgatcatagtaggcctctattgttgtttattggtgttaaccatcataagcagccagtcatatttggtgcagcattggtttatgatgaatcagttgaatccttcaaatggttgtttgaaactttcaaatctgcaatgagtggcaagcaaccaaaaacagttatgatcgatcaatctacagcaatcagtgaagcagttgcttctgtttggccaaggaccacccagcgcttttcactgattcatttatataaaaatgccactaagatattaagggatgccttccaagcctcggaaacttttgcagacgattttagcatgtggttgtatggctatgaggaggagggggatttcttgtcaagctgggaaatcctctcagataagtacaatctaaaggacaatgagtggctaggtaaattgtatgcagatagagaaagatgggctttaccttatggacgtgattcattctgtgcagatattgcagccgcactccgaagtgataataacactgatgctatactggcagatcttctaaagaaagaaacggatttcccatccttctttaacaattatgacaaacttttggagaacaaacgcctagctgaacaacaagctgactaccttggggttcaaatggcacagagagtagcacctctgcggatgctttggcaagctgctaatgcatatactcctacactttttgagatgttcaggttggaatttgaactgaccttgacttgcatggcttattgctgtggtgagattggaccaatatctgagtatgaggtaactgtcaaaaacaggccccgtgaccattttgttagatttgactcatcagaatgtatggttgtttgtagctgtaagaaatttgaattcacaggtattccatgttgccatgtactgaaagttcttgaggtaagaaatattaaagaacttccaccacactacattttgaaaagatggagaaaggatgctcagagtgaatctccgagggagaactatggttttgaagctgtagatgaagatcccaggttcttgttgtctaaacgatacagcatgttgtatcgaacgttctacaaaattgcagcaaaagctgccgaaaatattgaagcttatacatacatggagagccaatgtgatcagtttatagagcaagttgaacttctattgcaagcaaagttacatgataaatcttcattgagcactatactgaaagttcaacagccaaatttgtttccgaatgaagccagcaacagtgaaactcgcagagtaagtagtaagaaaattaaaaatgtagatacgcgtcggcagcagcaaagtcctcttcaatcaaataagaagaaaaagggtagacaaggtttgttcttcatccaagcttcttcagaactagattttatatagatcaaggattgatcttattaaaatgttgtaggtctaccggagcctgaggaggctgaagttccgcttagggttgatcctcctacaatatcaaatgacattccaaatcatctgagaactccaaccagtcaatttcttgcaacaagccatataatgcaggtaacatttatatttgctttctgctttctccagtcctaaaccccagttttgatgaacagagtgcagacggtgataactgtagtttgtagttgaactctgtatgacccatgtactgaatattgttgcttcacatatacaggcaccgtatattgcacagcaattcggacttagctctcttcagggatttcctggcatatcaccatttgggcaggtaattggagcattgactacattgatgaatggctgaagagaagtgtcaattttgttcttcttataacttgcaaatttgaactccaaaacagttgcaggaaccagcacctgctcctctccagcaacctcatctacagcaaccaccctttcatagcggtccacaaatcccccaggtgattgttataacttacacccatgttcccttcccaagggatttcactttcacagattccattagcaattactaggctaagactacaagtgttcgttgagtatacacatatttcccttgaagattttcatgtaggtgtgttatagttaaatcaaccttttgttatcactctgtcccatgatctcatttgatacttttcttgtagtggaattaacctttgttttttgatcatataaaattgcttaacaaaaattaatagtaggtcgcatgccgtgttttcgtgtaggccccacctccggacatccagtcattgcagtttcttagcagcaatcctcaactgggtcaccaagccacggatcaaagccagtacaccattccagtctgggatttcctgtgatgtacgctgtgatatactagcatgtaccatagtactagcaatctagctgtaaattatgtaatggcaataatgtagaaactaaattatgccagcttgagcagcttttctatgttagtggaacaattgagcgcggct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0777700, RefSeq:Os03g0777700