Os03g0780600

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Revision as of 13:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0780600| Description = Tubulin beta-1 chain (Beta-1 tubulin)| Version = NM_001057986.1 GI:115455700 GeneID:4334309| Length = 3041 bp| Defi...")
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Gene Name

Os03g0780600

Description

Tubulin beta-1 chain (Beta-1 tubulin)

Version

NM_001057986.1 GI:115455700 GeneID:4334309

Length

3041 bp

Definition

Oryza sativa Japonica Group Os03g0780600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33222463..33225503

Sequence Coding Region

33222569..33222962,33224067..33224336,33224435..33225105

Expression

GEO Profiles:Os03g0780600

Genome Context

<gbrowseImage1> name=NC_008396:33222463..33225503 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33222463..33225503 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggagatcctccacatccagggcgggcagtgcgggaaccagatcggggccaagttctgggaggtgatctgcgacgagcatggcgtggacgcgacggggcggtacgcgggggactccgacctgcagctggagcggatcaacgtctactacaacgaggcgagcggcgggaggtacgtgccccgcgccgtgctcatggacctcgagcccgggaccatggactccgtgcgctccggccccttcggccagatcttccgccccgacaacttcgtcttcgggcagtccggcgccggaaacaactgggccaaggggcactacaccgagggcgccgagctcatcgactccgtcctcgacgtcgtccgcaaggaggccgagaactgcgactgcttacaaggattccaagtttgccattcattgggaggaggcactggatctggcatgggaacccttcttatttctaagattagggaggagtacccggatagaatgatgttgacattttccgtcttcccatcaccaaaggtctcggatactgttgtggagccttacaatgctaccctttctgttcaccaacttgttgagaatgctgatgaatgtatggtgcttgacaatgaagctctctacgacatatgcttccgcacactaaagcttgctacccctacctttggtgacctcaatcatcttatctctgcaaccatgagtggtgttacatgctgcttgaggttccctggtcagctcaactctgatctgcgcaaacttgctgtgaatctcatccctttcccccgtctccacttcttcatggttggctttgcgccattgacttcacgcggatcacagcagtaccgtgctctcaccgttcctgagctgacacagcaaatgtgggatgcgaagaacatgatgtgcgctgctgatccccgccatggccgctacctcacagcttctgccatgttccgtgggaagatgagcaccaaggaggtggacgagcagatgctcaatgttcagaacaagaactcctcatactttgtcgagtggattcccaacaacgtcaaatccagtgtctgtgacattccgcccagggggctgaagatggcggcgaccttcgtcgggaactccacctccatccaagagatgttccgccgggtcagcgagcagttcactgccatgttcaggaggaaggctttcttgcactggtacacaggcgagggaatggacgagatggagttcaccgaggcagagagcaacatgaacgatctcgtcgcggagtaccagcagtaccaggacgccacagccgatgaagagtacgaagacgaagaggaagaagctgaggccgaatag</cdnaseq>

Protein Sequence

<aaseq>MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL ERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP DRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLA TPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQ NKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRK AFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEYEDEEEEAEAE</aaseq>

Gene Sequence

<dnaseqindica>107..500#1605..1874#1973..2643#gcaaccccgtctcctccgcttcgctactctcctcgtcgtctccggctccggctccggtttccggcgagcggcggcgcgatcccgggcggcgaaggagggggaagccatgagggagatcctccacatccagggcgggcagtgcgggaaccagatcggggccaagttctgggaggtgatctgcgacgagcatggcgtggacgcgacggggcggtacgcgggggactccgacctgcagctggagcggatcaacgtctactacaacgaggcgagcggcgggaggtacgtgccccgcgccgtgctcatggacctcgagcccgggaccatggactccgtgcgctccggccccttcggccagatcttccgccccgacaacttcgtcttcgggcagtccggcgccggaaacaactgggccaaggggcactacaccgagggcgccgagctcatcgactccgtcctcgacgtcgtccgcaaggaggccgagaactgcgactgcttacaaggtatctcatctcatctcgcatgtcccattccgcgtggtttagctagatccgagagaggctttgcaccatcgagttagatctagtacggatctgagcttgtagcgggtggaagcgcgattaacgtctttttttgaaaccatggagtgcgattaacatcggtgccagtttcgcatttaagggagaagcggttttagcatttagacattccccaattcgtagtcctgttaattgtagtggtgtatgtatcgaattgaactgtccattgctgttgatcttctctataagtatgtcttcgtgttatttgttgtatagcatgataatctgtcatctgtgctacttgtgttctaaattctaatggcccaatttgcatttagcttataatgccattgtgtgaccaatttttcatatcttggtagggatgtgcctgtgagaattttaagctccataagacgctctatcaatcatcaacctatgttttgtatatgagctcctattgtcttatgtagcttgatcaacatcaattgttgttgccttgttggtggaatgggcatcaacatcaacaccaatatcttatctagctcctactgtagctgttctagatgtttacacagaacttttctctttacctgtagtgtccacctgtgtcatagctggatttaattctttaaaaactcaaaacatagcaaaattgtaaccttgtctttcatggtttacaatgaaatcaaaactttattgctttggtcatccttatgattatttatttttggtacagctgtacaggtataatattcaacatgatagacccaagtaatatgccttagttgaatgccatgacaagttcatcgactaataaagcttggtagaagaagatgtgaaaaattgcctttgccttaatccatataataccttctctattggaacatgatcaattgctcccaaactctggtttcgtggaagacacagtgataccctaaacttctagctgcccttggccttttgaatgttgctacattcgttgaacccaaggctgccttttgtagatgcatgtttgaagtctgtttgcattgatgactaacatcatggtcttatattctttacttgcaggattccaagtttgccattcattgggaggaggcactggatctggcatgggaacccttcttatttctaagattagggaggagtacccggatagaatgatgttgacattttccgtcttcccatcaccaaaggtctcggatactgttgtggagccttacaatgctaccctttctgttcaccaacttgttgagaatgctgatgaatgtatggtgcttgacaatgaagctctctacgacatatgcttccgcacactaaagcttgctacccctacctgtaagttagtctcctcttgtttacttctccatgatatcactaaattactgttcaactagaagtaggcactcatagcttgcttggttctaacaatgcagttggtgacctcaatcatcttatctctgcaaccatgagtggtgttacatgctgcttgaggttccctggtcagctcaactctgatctgcgcaaacttgctgtgaatctcatccctttcccccgtctccacttcttcatggttggctttgcgccattgacttcacgcggatcacagcagtaccgtgctctcaccgttcctgagctgacacagcaaatgtgggatgcgaagaacatgatgtgcgctgctgatccccgccatggccgctacctcacagcttctgccatgttccgtgggaagatgagcaccaaggaggtggacgagcagatgctcaatgttcagaacaagaactcctcatactttgtcgagtggattcccaacaacgtcaaatccagtgtctgtgacattccgcccagggggctgaagatggcggcgaccttcgtcgggaactccacctccatccaagagatgttccgccgggtcagcgagcagttcactgccatgttcaggaggaaggctttcttgcactggtacacaggcgagggaatggacgagatggagttcaccgaggcagagagcaacatgaacgatctcgtcgcggagtaccagcagtaccaggacgccacagccgatgaagagtacgaagacgaagaggaagaagctgaggccgaatagcattgagccccatttgcccttcacaggttgttttgccagtgaagagttttgtgtctttgtgatgctgtgctcttttttctttctctgacgtgcgtgatggatgtatgggtgaggtttgcgtccgtgcttcgttttgtcacctgtgctgcgtagcaggctgcagtcccgttttgtaagacgtctctggtggtcagtagctgaaggcttgaaaagtgttttgagtgccctccttgagctaaatcacctgtaagttctgacatgtattggtagtggttttctcatctctgtgaagcttctgtgtagtctgttactatatccagtttctctgtatatcgatcgtagtgtcatcttgcttggctgaaacgttttaaagatcactctggagtacgctgttaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0780600, RefSeq:Os03g0780600