Os03g0784000

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Revision as of 13:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0784000| Description = FAD dependent oxidoreductase family protein| Version = NM_001058005.1 GI:115455738 GeneID:4334332| Length = 7572 bp|...")
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Gene Name

Os03g0784000

Description

FAD dependent oxidoreductase family protein

Version

NM_001058005.1 GI:115455738 GeneID:4334332

Length

7572 bp

Definition

Oryza sativa Japonica Group Os03g0784000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33382982..33390553

Sequence Coding Region

33383035..33383098,33383210..33383309,33383409..33383589,33384022..33384094,33384190..33384369
,33385015..33385112,33385540..33385637,33385722..33385895,33385981..33386161

Expression

GEO Profiles:Os03g0784000

Genome Context

<gbrowseImage1> name=NC_008396:33382982..33390553 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33382982..33390553 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgccgccgccgccgccgcagccgcctcggctgccaatgtcgccgtcatcgggggcggaatatcgggcgctgtatgcgcgtcgctgctggccgcgcgcggcgtggcggtgacgctcttcgactccggccgcggggccggtggccgcatggcgcagcggagggaggtgatggaggacggcacggagctgcgattcgaccacggcgcgccatacttcaccgtgagcaacgacgaggttgctcgggtcgtgagcgggtgggaggcgcgggggctcgtcgccgagtggaaggccatgttcgcgtgcttcgatcgggaggccggcaaattcactgatttcgagaaggagggaacaattaagaagtatgtgggagtgccaggcatgaactcaatatgcaaatcactttgtctagaggatggtgtggtggccaaatttggtgtcaccattggcaggatggactggattcaagataggagttcatggttactggctagtttggatgggagagatcttggccattttgattatgttgtagcaaccgataagaatatagcatcaccaagattttctgggctaactggaagaccaccgcctcttgatttgtcattgcttccacaattgtcaatgatgattcaggatatccctgttcgcccctgttttgctcttatgttagcattctcagagcctttgactaaggtacctgttcaaggtttctcattcaataattctgactacctaagctgggccttttgtgatagtagcaagccaggacgtgctcatgtaccgcttaacagtcagtcttgggtattgcattcgacagctgagtatgcttcaaaggtaatcaataatattggtccacggaaaccttcagctgatgcccttgctaaagtggcagaggaattgctcaaagaatttcaggctacaggattgaacataccacagccaatctttatgaaagcccacagatggggcagtgctttcccagccatcgctataagtggagacgacaagtgtgtttgggataagagcatgaaattggctatttgcggagatttttgcacaagtccaagtgtggaaggagcagtccttagtggcatgagaggagcctccaaaatactacggtgtttaaactttccgtcagggttgtga</cdnaseq>

Protein Sequence

<aaseq>MSAAAAAAAASAANVAVIGGGISGAVCASLLAARGVAVTLFDSG RGAGGRMAQRREVMEDGTELRFDHGAPYFTVSNDEVARVVSGWEARGLVAEWKAMFAC FDREAGKFTDFEKEGTIKKYVGVPGMNSICKSLCLEDGVVAKFGVTIGRMDWIQDRSS WLLASLDGRDLGHFDYVVATDKNIASPRFSGLTGRPPPLDLSLLPQLSMMIQDIPVRP CFALMLAFSEPLTKVPVQGFSFNNSDYLSWAFCDSSKPGRAHVPLNSQSWVLHSTAEY ASKVINNIGPRKPSADALAKVAEELLKEFQATGLNIPQPIFMKAHRWGSAFPAIAISG DDKCVWDKSMKLAICGDFCTSPSVEGAVLSGMRGASKILRCLNFPSGL</aaseq>

Gene Sequence

<dnaseqindica>54..117#229..328#428..608#1041..1113#1209..1388#2034..2131#2559..2656#2741..2914#3000..3180#ggaaaagctctccattctccgcaccgcaccccgtcgccgggaagcctcgaacaatgagcgccgccgccgccgccgcagccgcctcggctgccaatgtcgccgtcatcgggggcggaagtaagcagacgcagcccattccaatccctcatcctctctctctgatccgattgctcccgtttgaactgacccgtacctgcgatcccctttttggtttgtccaccgatgcagtatcgggcgctgtatgcgcgtcgctgctggccgcgcgcggcgtggcggtgacgctcttcgactccggccgcggggccggtggccgcatggcgcagcggaggtgctcgaccaatttactgcccgggccgcgtgtgttggttccgcgctgatcggtgctgttattttttccaccccattttgctggtttgtgtgggcgcagggaggtgatggaggacggcacggagctgcgattcgaccacggcgcgccatacttcaccgtgagcaacgacgaggttgctcgggtcgtgagcgggtgggaggcgcgggggctcgtcgccgagtggaaggccatgttcgcgtgcttcgatcgggaggccggcaaattcactgatttcgagaaggttctaggcttcgaaaccctcccatagttgaggcttcaacttgaacatgtcacgtatctagtggtagcatgactgtgggaattgggatagtttactggtgaaccccttaactgaatgtctgaatgcagaatgcagtaggttgcacttggaatagtaagccatctttctgctgccaaatctactcatcactgaatatataatgtgcagtactctaaaaatttagtggatagatcgaactaccgttactcacatgttcagaatcaacttaacctgtgatgtctctgatgttgatggtactattgtagtgctgatccttatcaaaagatggagttgggggtggattagaatgatatgtagtcttatgtatctgcaccgcttaaaatgatactttctacttactaacataagctttctggcattatattcgcacaggagggaacaattaagaagtatgtgggagtgccaggcatgaactcaatatgcaaatcactttgtctagaggatggttagacttactttgtagcattatgagtttatgactcttcagtaccagcaatctagaacttgctgctcatacatgctatctcttgtgcctgttaggtgtggtggccaaatttggtgtcaccattggcaggatggactggattcaagataggagttcatggttactggctagtttggatgggagagatcttggccattttgattatgttgtagcaaccgataagaatatagcatcaccaagattttctgggctaactggaagaccaccgcctcttggttcgttttattctattatcttcataatatgcactaccataacacaagtttcaaaataatgggtttatgaacttatgttatgttttgaaagacaatattgtacaatagttttttttagcaaattatattgatcaggaggtctagcactacaattaattaaagaaaatattctttcaccataaattctttgttctaatttttctgacggtttatggtaaccaggataaccatatttatctttgattagaaaaataactcttgttttctataacttaattttatcattgtctgtatcttaagatttctacatttgtttaaaatgtagtaatagattgacaaaatagtgaagacagtaagaaaatgctcctatatgaatctatgcctgcctccttatggaagattgttccttttttccttttaaagaatatggttttgcagctaccatgtccaaacaataagttgacagcaagaaaatgcacatttaatgaagggtacaatgcaggttacttaatgtcaaaataaaccggtgtttgattggactcatgtaggatacattgtaccattgttcctaattacacagaacagcggtatttttatgatatctcagctgaatgtctgagcagttgcattatttttccttctcagatttgtcattgcttccacaattgtcaatgatgattcaggatatccctgttcgcccctgttttgctcttatgttagcattctcagagcctttgactaaggtatatgcaacctacatgttagccattcatgtaactccagatcatcaccattcccctcacttgttcttccacttacctattttatgatgaaatttccatggcaagtttgtaacacacttcattcttatcagttattacaatgcatttctacttgctattatgttaagttgaataggattccattatcttttatcagttgtcacagcacatttctgcctgctatcagttatcacaatacatttagatggaaccatttgctgagaaaaaaataaattcctaaatagcatagcactaaagggatcttcaatcgcccttattattcacataatctaatcaatcctgcaagttgtctattatatgatgcttggaaaattttgtagttttcattcagtcagtttattcttctgtcccatgatatttcaatcaggtacctgttcaaggtttctcattcaataattctgactacctaagctgggccttttgtgatagtagcaagccaggacgtgctcatgtaccgcttaacaggtgtgtatttattttgagacttttgtacacactgaagatcttttgctgtgttgtggttcattttcattaactctgtgtattcagtcagtcttgggtattgcattcgacagctgagtatgcttcaaaggtaatcaataatattggtccacggaaaccttcagctgatgcccttgctaaagtggcagaggaattgctcaaagaatttcaggctacaggattgaacataccacagccaatctttatgaaagcccacagatggtcagtattctaggttgaaatcttacccaattattgatgccatattccgtcgacattgctagttttcatgttaaacaaaatgcaggggcagtgctttcccagccatcgctataagtggagacgacaagtgtgtttgggataagagcatgaaattggctatttgcggagatttttgcacaagtccaagtgtggaaggagcagtccttagtggcatgagaggagcctccaaaatactacggtgtttaaactttccgtcagggttgtgacttgtgagttgtggctaacctcctacaattcttccatttcctccttggtttgtatttatgtgcatccactttacagaaacagttaatcaaaccccaactgagagttgagggccatattgtttaccgaccaattaggtatgaaataagaaatcagtaccgatggcaatgttattttttatgaagtttatttgctttattatctattccatgtcatatagaaaagccaggttccactggaagtgctgtttctctgttggcctactatgccttggactaaaacacactaactacaagtctaggttgtctgccagacagaaccttgtatgagtgcacaagatgaaatgcatgatggatattgtaaagaagccatacaccaaccactcctgttatctggttgtgtatcatggaatgtcaccaaatattactagggggttagggaacatgcttgtcatgcaagtgatgtagcagaatagcctttggagaatgcttgctgaacatattaatttgacagaaatgaaggaacaatagttataattgatcaagatttgttctgtcagttggtctcaatctcaattcggtgatactttatacagatatgtggaaatgtctgcataccctttatattggattctacttcctaaaagttcagaagtctaactgtagcacattcaaggtgacatgattataatacggtcatgtaatgcttgaaatgtgagtttaaatatactttacagttacaattttaaatcccatttcattgaggacaaagttttgcactccaacaatttcttagcatcaggaaaggctatgatttttgtggtccataggtcctgtaaggaccatcatatctttaaactgtcatatttagatattccttatagcttttttgtgttcaagtcttctacccttgcaatgatatcagatgctgcccagcgacctaatataataaatgtctaagtgcactgttgggagaaatcttttccaaccagacttcatattcttatagctttgtttttaatctaatttgcccaacagagcaactttcagtttagtttggtagtgtctactgatgtattttggtacaatatgtgctctattgtgagtgaataaataggttagtaaattcacactactatttggagctagaaatgctcaaagcaattgtatcgctgcacataatggttccacatcttcaacagaaacaggtacgattttcagtttaaaagaaggctttgcatggtttgttccctatgtaatcatttcaattatctgttgcatattctctgagttcatcttattagcctttacattcctatatccttgcatccaccttttccttttcttgttgaagaattttgggtttgtcccacaggaaattttcatgtgcaaattggtcacccttcatgagcatctgtgaaaaaggtaagagaatatagccttatcattctccattttttcaaggtattaactgtcacattgaaagggtatataaactatatatagttcttaagactataagcacccacaaatttctttcagttcaatgattatgagattggcaataacccaaatatgcgtatacatcttctgtgagctactacagagtacttttcagagtagcttttttttttgtttagtctaggccatacttacctgataaatctatacctgggcctgtttctttttttttttcattctatgagaaaaatccccttttactcttgtttcccaggcccctctcctgttgtcatatattaccaaaacaatgcctctttctcttgaagatgcagtgaactgcatctacgactctgttatatatgtcaatgaggttgcaaattcatagtaggaaaatgcatttggctatagctatattttgcatctttatttatgccaattcaaatgctatataagatatatattgcacacctatagaagtattgcttgcgtcaatagtactatacaataatcaatacaacacatatctttttctttaaaacttccattgattaaaacaatctaatcggctgcgagttaggtataggcagtctgcatgcgttgctcgtgcgctatgcagactgattgttcttgcaggtgagcagcacattttctgaaagcttcatccagggtcccaactgaatcgaagtacgctacgctgctcacaacagtcacagcagatgcatggtcctggcatggtggcgtacgtgtggccacccaatcatatatatctatcaacctgtcaagtaagcagtcattttccattcatttgatgcagcaatatccgtatcttgtgtatttattttggatgtaaaatatggaagcattttattctcttgctcgtgttttgtgcttcttcagagtttaccatttatttttggtagttaggacgatccgtcatttgaatttcagacttcaagaaatttctccatcgactaatcataaaaaagaaggaacgatccattgactattaataaatgatgactataacgcaacttttatccatttcacaatttataaccttgatgctatggcaactacatacttcagcagcttagctacttgaaaatagcaggccagtacaaaatggaagagaacaaccagagagccaaataaaagcatgagcatgaacagtttttcctttgtctgtattgacgaatttcgttacagagatgcaggataggattccctagacaaacactgcaggtctaatttgtctatgtatataacttcattaagaaaacaaactataagatcgtctatgacaaagcaacaaacattaaaaatctccactactgtagccaaacatgtgactaaagatcctagacccctaaataacccgtcattctgactccccagagtaaactataacagaggggacgaagctggtaactgctaactaaccttacccagggcggtttttttctacttacaatagttaatcactcctctttccaagaaatcgctttgcaaacgtggttcgatcatcttttttgtgcaaaaggagcgagattagatccaactcttcaagttgcaagttgttgcatggctgatgagtgatggctccattacttcatccctgggtagagactagagagattcttggctacttgcatagttgcatttacaaacacaaacaagccatagcagatttatgtactagtaatgctacacgtgtgacctatgtacctatgcatgcatgaaaatggaatccaaagcaagcagcagggagggagggggacaagactatagtgtgggcatgcagtactcaaagcctcagctgtactaactgggagtgtctggtcctcccagtgaatgcctgaatggtgcagtgaatggtgataccgagctcatgccatctggtgcacaagtgctggtttctcatcagtgatctatcttcacactgtagcatgcagtacaaattactgctttgatctttggaaaaaggctggttggtgtggctggagtgaaattttatattccctcctttgtcttaggcattgtcctgactcctgagtagtacctgtttatcaccccctggagctacttttgcaccaccagcactactttgtagcctgtaagttgtaacctagatcattatgctttatgcatgcctatttacctactagtatggtctggtgctgtttacatgatggtttatcaacattgctgttaggccactccatcatagaaggggacagtatatgtaggtccgatctgtggtgtctggtaaaatatacagtagcccatgcactcagttaataagctactcttaacatgacctaaatgctcattacttgggatttaggatcagctcagtcccccacaccacatgaataacaaagtaagacatccaatccttcaacccaagttgaacatgtgtttcctgacatcaatatatacatgcattctgatacaatccctgttttctgtgatcttttcatttgcactatatcttttgatgggtggaatcaatggtgtgacgcctcttgcaggagagtatatatatgaggcaaatcacatttgaagacaaatttgctggatttggagcatctcaagccataaccgatgcccagctcggcagctctccaggcctccacgttgcatgaagagtgccacctatttcgacggatcaaagaatacatcaccagcccgtcaacacgcgcacctcggatttggtgtttttacttaaagtgagttaagctgcatgcttcttgcagtcgcagatccgggtccggcctgcccagaacctgtctctccgctgcgttaaaggagtaattagcatactccctccgtgttcgtaaataaagtcgtttagaacaatatttaagttaaatcttgataatataaatcataaataactctcaagttgttgagtttgaaaatataaaaattata</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0784000, RefSeq:Os03g0784000