Os03g0784100

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Revision as of 13:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0784100| Description = Patatin family protein| Version = NM_001058006.2 GI:297601784 GeneID:4334333| Length = 1613 bp| Definition = Oryza ...")
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Gene Name

Os03g0784100

Description

Patatin family protein

Version

NM_001058006.2 GI:297601784 GeneID:4334333

Length

1613 bp

Definition

Oryza sativa Japonica Group Os03g0784100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33391658..33393270

Sequence Coding Region

33391658..33392014,33392113..33392175,33392302..33393270

Expression

GEO Profiles:Os03g0784100

Genome Context

<gbrowseImage1> name=NC_008396:33391658..33393270 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33391658..33393270 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagccggccgccgccgccgccgccgggcagctcgacgtggacaagctcacctacgagatcttctccattctcgagagcaagttcttgttcggttacgatgatcccaagctcgtcttcagcggcggcgacgagccgcagggggcggtgaaggggactctggcgagaggcccggcggtggtggagcgtggcaaggtgtgcgtgctgtcgattgatgggggtgggcgggcggcggatgggctgctcgccggcgcggcgctggtgagcttggaggcgtcgctgcggcggcggaccggggatgagacggcgaggctggcggatttcttcgatgtcgctgctggctccggcgccggcggcgtgctcgcggcgatgctggtcgcgcgcggcggggatgggcggccgatgttctccgccgaggacgcgctggcgttcctcatgaggagcctgcggcgagggtggtccggcggcggcggcggcggcgccgccggtggcatccgcgcgctgttccgccgccccggcgccgcgttccggaaggtgttcggcgacctgacgctgcgggacacggtgcggccggtgctggtgccgtgctacgacctcgcgtcggcggggccgttcctcttctcccgcgccgacgccgtcgagacggcggcgtacgacttccgcctccgcgacgtgtgcgccgccacctgcgccgggtcggacggctcggcgtcggcggtggaggtgcggtcctccgacggcgccacccgcatcgcggccgtcggcggcggcctcgcgctcggcaaccccacggcggcggccatcacccacgtgctcaacaacaagcgcgagttccctctcgccgccggcgtcgaggacctcctggtcatctccatcggcagcggcgagtgcgacaaccgccccaccggtggcgccgccgcctcgacatccgagatcgtcaggatcgccgccgaaggcgtcgccgacatggtggatcaagcagtggccatggcgttcggacataataggacaaacaactacatccgtatacaggcgatggggtcgccgcgggcgagccgaggagggatgagatgcggcggcggcggcggcggcgatggcgcggggtggggcgtggcggaggagatgctgtcgcagaagaacgtggagtcggtgctgttccgggggaagaagctggcggagcagacgaacgccgagaagctggagtggttcgcgcacgagctcgtcaaggagcgggatcgccggaggacggccggcgcgctcgcccccgccgtcgtcaagcagcagccgtcggagtcggcgccggcgacggcggccgccgccgatggccacacgccgccgccgacgtcgtactcgaacctggtcagccagatgttcaccaccatcctgtag</cdnaseq>

Protein Sequence

<aaseq>MEPAAAAAAGQLDVDKLTYEIFSILESKFLFGYDDPKLVFSGGD EPQGAVKGTLARGPAVVERGKVCVLSIDGGGRAADGLLAGAALVSLEASLRRRTGDET ARLADFFDVAAGSGAGGVLAAMLVARGGDGRPMFSAEDALAFLMRSLRRGWSGGGGGG AAGGIRALFRRPGAAFRKVFGDLTLRDTVRPVLVPCYDLASAGPFLFSRADAVETAAY DFRLRDVCAATCAGSDGSASAVEVRSSDGATRIAAVGGGLALGNPTAAAITHVLNNKR EFPLAAGVEDLLVISIGSGECDNRPTGGAAASTSEIVRIAAEGVADMVDQAVAMAFGH NRTNNYIRIQAMGSPRASRGGMRCGGGGGGDGAGWGVAEEMLSQKNVESVLFRGKKLA EQTNAEKLEWFAHELVKERDRRRTAGALAPAVVKQQPSESAPATAAAADGHTPPPTSY SNLVSQMFTTIL</aaseq>

Gene Sequence

<dnaseqindica>1257..1613#1096..1158#1..969#atggagccggccgccgccgccgccgccgggcagctcgacgtggacaagctcacctacgagatcttctccattctcgagagcaagttcttgttcggttacgatgatcccaagctcgtcttcagcggcggcgacgagccgcagggggcggtgaaggggactctggcgagaggcccggcggtggtggagcgtggcaaggtgtgcgtgctgtcgattgatgggggtgggcgggcggcggatgggctgctcgccggcgcggcgctggtgagcttggaggcgtcgctgcggcggcggaccggggatgagacggcgaggctggcggatttcttcgatgtcgctgctggctccggcgccggcggcgtgctcgcggcgatgctggtcgcgcgcggcggggatgggcggccgatgttctccgccgaggacgcgctggcgttcctcatgaggagcctgcggcgagggtggtccggcggcggcggcggcggcgccgccggtggcatccgcgcgctgttccgccgccccggcgccgcgttccggaaggtgttcggcgacctgacgctgcgggacacggtgcggccggtgctggtgccgtgctacgacctcgcgtcggcggggccgttcctcttctcccgcgccgacgccgtcgagacggcggcgtacgacttccgcctccgcgacgtgtgcgccgccacctgcgccgggtcggacggctcggcgtcggcggtggaggtgcggtcctccgacggcgccacccgcatcgcggccgtcggcggcggcctcgcgctcggcaaccccacggcggcggccatcacccacgtgctcaacaacaagcgcgagttccctctcgccgccggcgtcgaggacctcctggtcatctccatcggcagcggcgagtgcgacaaccgccccaccggtggcgccgccgcctcgacatccgagatcgtcaggatcgccgccgaaggcgtcgccgacatggtacagaaaaaaacaatccatccagtgtgtctctctgtgtggtcctcttcttcctttctcgcatgcattcttgttcttcgtgctcccttggctaacgccttctccccgacgcatccttgactccaggtggatcaagcagtggccatggcgttcggacataataggacaaacaactacatccgtatacaggtcagagaactcacagccatcactataccaccatgatatctttgcgtttgctttagcttgatcaatctccatctccattggtgtctttgatcttgcaggcgatggggtcgccgcgggcgagccgaggagggatgagatgcggcggcggcggcggcggcgatggcgcggggtggggcgtggcggaggagatgctgtcgcagaagaacgtggagtcggtgctgttccgggggaagaagctggcggagcagacgaacgccgagaagctggagtggttcgcgcacgagctcgtcaaggagcgggatcgccggaggacggccggcgcgctcgcccccgccgtcgtcaagcagcagccgtcggagtcggcgccggcgacggcggccgccgccgatggccacacgccgccgccgacgtcgtactcgaacctggtcagccagatgttcaccaccatcctgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0784100, RefSeq:Os03g0784100