Os03g0786100

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Revision as of 13:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0786100| Description = Similar to Glycolate oxidase (EC 1.1.3.15) (Fragment)| Version = NM_001058022.1 GI:115455772 GeneID:4334349| Length ...")
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Gene Name

Os03g0786100

Description

Similar to Glycolate oxidase (EC 1.1.3.15) (Fragment)

Version

NM_001058022.1 GI:115455772 GeneID:4334349

Length

3642 bp

Definition

Oryza sativa Japonica Group Os03g0786100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33479486..33483127

Sequence Coding Region

33480206..33480345,33480836..33480960,33481201..33481247,33481380..33481457,33481554..33481678
,33481782..33481848,33481947..33482009,33482133..33482202,33482302..33482507
,33482598..33482786

Expression

GEO Profiles:Os03g0786100

Genome Context

<gbrowseImage1> name=NC_008396:33479486..33483127 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33479486..33483127 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggagatcaccaatgtcatggagtaccaggccatcgcgaagcagaagcttccgaagatgatctacgactactacgcctctggagctgaggatgagtggactctcaaggagaacagggaggcattctccaggatcttgtttcgtccccgcatcctgatcgatgtctcaaagatcgacatgtccgcaactgttcttgggttcaagatatcaatgcccataatgattgctcccagtgccatgcagaagatggctcaccctgacggagagtatgcaacagccagggcagcttcagcagcaggaactataatgacactgtcatcttgggctacttcaagtgttgaggaggtcgcctcaactggaccaggaatccgtttcttccagctatacgtgtacaaggacaggaatgtggttgagcagcttgtcagaagagccgagagagctgggttcaaggcgatcgcactgaccgtggacactccgcgactgggacgcagggaagctgacatcaagaacaggttcgttctgccaccatacttgacactgaagaatttcgaaggcctggacctcgcagagatggacaagagcaacgattccgggctggcctcctacgtcgccgggcagatcgatcgcacgctcagctggaaggatgtgaagtggctgcagagcatcacgtcgctgccgatcctcgtcaagggcgtcatcaccgcggaggatgcgaggctggccgtgcactccggcgcggcggggatcatcgtgtcgaaccacggcgcgcggcagctggactacgtcccggcgaccatcagcgccctggaggaggtggtcacggcggcggcggggcgcatcccggtgtacctcgacggcggcgtccgccgcggcaccgacgtcttcaaggcgctcgccctcggcgccgccggcgtcttcatcgggaggccggtggtgttcgcgctggcggcggagggggaggccggggtgaggaacgtgctgcggatgatgcgggaggagttcgagctcaccatggcgctcagcggatgcacctcgctcgccgacatcacccgcgcccacatctacaccgacgccgaccgcctcgcccgccccttccccaggttgtga</cdnaseq>

Protein Sequence

<aaseq>MGEITNVMEYQAIAKQKLPKMIYDYYASGAEDEWTLKENREAFS RILFRPRILIDVSKIDMSATVLGFKISMPIMIAPSAMQKMAHPDGEYATARAASAAGT IMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVEQLVRRAERAGFKAIALTVDTP RLGRREADIKNRFVLPPYLTLKNFEGLDLAEMDKSNDSGLASYVAGQIDRTLSWKDVK WLQSITSLPILVKGVITAEDARLAVHSGAAGIIVSNHGARQLDYVPATISALEEVVTA AAGRIPVYLDGGVRRGTDVFKALALGAAGVFIGRPVVFALAAEGEAGVRNVLRMMREE FELTMALSGCTSLADITRAHIYTDADRLARPFPRL</aaseq>

Gene Sequence

<dnaseqindica>721..860#1351..1475#1716..1762#1895..1972#2069..2193#2297..2363#2462..2524#2648..2717#2817..3022#3113..3301#gtgcagaaactcaaagatctctctccctcacctatattacctgcaccaacaccactgaccactccctcctcctgttcttgctccttcctcccagtgtctctcaaggtaagataagctacatgcatatcagtgtacagaatttgcttttctatcggtttgatttgagtcatcttttctttcgtgatttcttcagtcgtaatagttcttctggcgtggccaagaatttgttgcacgcatagtttcaaaatgaccaaattattaggatctattgcatgttgtcatctttgtttctgattgattttttagttctcttgtttgtatgagtgatgagaggtttttttatatttgttcagttccaacgtcgtttgatcgttggtacagatgatgaagatttctttttttgtttatcatttctgttaaaagaataccacatattttctgcagaaacaaaaaaaatgggtatctgcatgcactccaagagaaaggagtcccttggtttctctgatgatggaaagtctttttttttttgtttaccttgttgctatgaacttttagcagacttgcatagttgcatgtgttctatcagaaaaaaaaaagaataagttatcatcatgcatgtagatgattgttattttagtaggaggaaagctatagctcaattcttttgacagtgctgttctttgggtgtagagcggtgcagggttcacaaggcaggagaaaatgggggagatcaccaatgtcatggagtaccaggccatcgcgaagcagaagcttccgaagatgatctacgactactacgcctctggagctgaggatgagtggactctcaaggagaacagggaggcattctccaggatcttgtaagccataattcttaattacttgattgcttgacatgttacaaattaattgcaccactactcctccctatgccatattgtgcatcaaaatatttcatctgtgtaaatgcctccctatgagtctaccatgtacaagttcaatctgatagctcatagttaagtaggatggatcgacaaaacattactagttgtccaatcctgaccactcggtctttttactaggtagactagtttagcatgagcacatcgtattcttttcaaaatagagttaagggcatttcattagttcagtaaaattgccaatcagtgaaactctcagctaatcataatcttattcccagacccagaatatctatcatacaacatctaacgttatcactttctcctacgaaagctttagcaaatgacttaaatttttcaatcacattccttaggttgaacatttgttaatttttcagcccacaatctgactgtaaccttttctggctaggtttcgtccccgcatcctgatcgatgtctcaaagatcgacatgtccgcaactgttcttgggttcaagatatcaatgcccataatgattgctcccagtgccatgcagaagatggctcaccctgacggtacatatgccatttcaattatgttgcttaattgttgtacagccttacatttagcccaaactcaaaaccaaaagtaatttcatccatcaacattagcatattatattgttttaaaaaaaagcatattactactacaaaaactgaaaataaactgaagttgttagcatgtaacaagcaagcacatgatctacattgatctttgcatagaattgggctaactaaaataccatatgtattcaggagagtatgcaacagccagggcagcttcagcagcaggaactataatggtatgctatctacatgttgtcatgttcaatagcaaacaacatttccttggatgcataacgaaaccaaaccaaaacagaaattcaaacttgcatgaacgccaatgttaatttggtatcgccttcatgtttcagacactgtcatcttgggctacttcaagtgttgaggaggtcgcctcaactggaccaggaatccgtttcttccagctatacgtaaaccatatcatatcactctgctcatgtagcatactttggctacattttattttcgtatctcattttcttgtatgatcttgcatacatctacaggtgtacaaggacaggaatgtggttgagcagcttgtcagaagagccgagagagctgggttcaaggcgatcgcactgaccgtggacactccgcgactgggacgcagggaagctgacatcaagaacaggtgagttcttaactagccacctgaatttggcacgatctagaaatgaatttcagcgagttgtcgtaaatgttaagtgatgtgatcaatggctgcgttgttgcaggttcgttctgccaccatacttgacactgaagaatttcgaaggcctggacctcgcagagatggacaaggtcggttaattcagccaaaaaaaaaaacagttattttctctgaagaaaaaatggtctgttctatgcagcaatttgaaccatttcgttggcatttgcagagcaacgattccgggctggcctcctacgtcgccgggcagatcgatcgcacgctcagctggaaggtaatgatcaatgctcatcgatgctacaacaaacttaccagcaaattaacttatcgaaattactgttcttgatgctaagatcgggagaaattctgacggtgtgtgttgttgatgatgatgcaggatgtgaagtggctgcagagcatcacgtcgctgccgatcctcgtcaagggcgtcatcaccgcggaggatggtaggatagcttcctgtttcttgcatttcttctgatttgactgatttgaaatccacaaaatcacaaaggaaactgatgcgtttatgcgcgcgtgcgcagcgaggctggccgtgcactccggcgcggcggggatcatcgtgtcgaaccacggcgcgcggcagctggactacgtcccggcgaccatcagcgccctggaggaggtggtcacggcggcggcggggcgcatcccggtgtacctcgacggcggcgtccgccgcggcaccgacgtcttcaaggcgctcgccctcggcgccgccggcgtcttcgtaagtccttcgatcgatagccgatgatctatggcgtgatacatgtcatcgtcgtcgtcgtcgtcttgatggattgaattgcgtttgcagatcgggaggccggtggtgttcgcgctggcggcggagggggaggccggggtgaggaacgtgctgcggatgatgcgggaggagttcgagctcaccatggcgctcagcggatgcacctcgctcgccgacatcacccgcgcccacatctacaccgacgccgaccgcctcgcccgccccttccccaggttgtgaggacctcgccgccgccgccgccggcgaactctagccaaacaataaacaatatcgacgacgccagagagcacgccgattaattaattaggtaatttttgcaaaagaatctcgtcgatccacacgcgcgcaagcaacacacgtactccgtgcacccctcgtaactgggtcgttcatgctcttaatcccaacgattaattatactggtataatctttgtaatttcgagtactgtacacctatttggcatctgtatatctcgccttaagatatttacggaaccggtttatatactcctttaatttttaattaacggagttcaacatatatataagttacttcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0786100, RefSeq:Os03g0786100