Os03g0788100

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Revision as of 13:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0788100| Description = Similar to RING-H2 finger protein ATL1P (RING-H2 finger protein ATL3)| Version = NM_001058034.1 GI:115455796 GeneID:4...")
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Gene Name

Os03g0788100

Description

Similar to RING-H2 finger protein ATL1P (RING-H2 finger protein ATL3)

Version

NM_001058034.1 GI:115455796 GeneID:4334362

Length

1192 bp

Definition

Oryza sativa Japonica Group Os03g0788100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33586902..33588093

Sequence Coding Region

33587007..33587633

Expression

GEO Profiles:Os03g0788100

Genome Context

<gbrowseImage1> name=NC_008396:33586902..33588093 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33586902..33588093 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcggcggcggcgcgccgcctggggcgccggggatgatgacgccgggcgacggcaactccgtcggcatgttcagctccgaccgcatcggcgggttcggctacggcgtcggcgtgtccgtcgggatcctcctcctcatcaccaccatcacgctcgcgtcctacttctgcacgcgcgcgcccgtcaccgcggccgatgcagcggcggcggcgggatcgtcgcggcggcaccgcggtgggggtgggggcggcggcggcggcggcggcggggccgggcacgaacacgacgacgtcgagctcggcatcgacgaggcgacgctcaaggggtacccggaggtggtgtacggccagccgaggaaggaggcggcgaaggcggcgtcggcggcggcgacgaagaagggcggcgcaaccacgtgcagctgctgctcgatctgcctcgacaactacggcgacggcgacgtgctccggatgctgccggagtgcggccacctgttccaccgggagtgcgtcgacccgtggctccggcagcatccgacctgccccgtctgccggacgtcgccgctgccgagccccttgccgacgccgctcgccgaggtcacgccgctggcaatggcgaggccgtcatga</cdnaseq>

Protein Sequence

<aaseq>MSGGGAPPGAPGMMTPGDGNSVGMFSSDRIGGFGYGVGVSVGIL LLITTITLASYFCTRAPVTAADAAAAAGSSRRHRGGGGGGGGGGGGAGHEHDDVELGI DEATLKGYPEVVYGQPRKEAAKAASAAATKKGGATTCSCCSICLDNYGDGDVLRMLPE CGHLFHRECVDPWLRQHPTCPVCRTSPLPSPLPTPLAEVTPLAMARPS</aaseq>

Gene Sequence

<dnaseqindica>106..732#aaaaaccgcaccaaaccatcgagctcagccgcggcgcgcgcgcggcgacaccaccaactcgctggctcggcgtcgatcgccattgcttgatcaagctcgatcgcgatgagcggcggcggcgcgccgcctggggcgccggggatgatgacgccgggcgacggcaactccgtcggcatgttcagctccgaccgcatcggcgggttcggctacggcgtcggcgtgtccgtcgggatcctcctcctcatcaccaccatcacgctcgcgtcctacttctgcacgcgcgcgcccgtcaccgcggccgatgcagcggcggcggcgggatcgtcgcggcggcaccgcggtgggggtgggggcggcggcggcggcggcggcggggccgggcacgaacacgacgacgtcgagctcggcatcgacgaggcgacgctcaaggggtacccggaggtggtgtacggccagccgaggaaggaggcggcgaaggcggcgtcggcggcggcgacgaagaagggcggcgcaaccacgtgcagctgctgctcgatctgcctcgacaactacggcgacggcgacgtgctccggatgctgccggagtgcggccacctgttccaccgggagtgcgtcgacccgtggctccggcagcatccgacctgccccgtctgccggacgtcgccgctgccgagccccttgccgacgccgctcgccgaggtcacgccgctggcaatggcgaggccgtcatgacacgtggaggttctttgcttggttttcattttttaaaatttttttcttattcatataaaactaaacttgaggatgaaatttgtgtattctgcaaaatggaatgcataaaagaattcctcaagatagggactagaaatttcctcttggtaattgggtgtaaatttgggttcagagtagattttcttttctgatataaacaaagtttggcataggattctctttggaattaggattcactttggatttttggagggagattatgtatggattacaaatttggatgaaccttctagagatctaatttttatatcatcaagcttagtgcagaagaacgaagatgagtgtaaacaaagtaagaagtaggaacatatttgcagaatgctttatatatgtaaaattctatcatgaatatctgtaaaattgaagatgcacatttcaaaaggaatagatccttttaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0788100, RefSeq:Os03g0788100