Os03g0788700

From RiceWiki
Revision as of 13:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0788700| Description = Beta-Ig-H3/fasciclin domain containing protein| Version = NM_001058040.1 GI:115455808 GeneID:4334368| Length = 2563 ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0788700

Description

Beta-Ig-H3/fasciclin domain containing protein

Version

NM_001058040.1 GI:115455808 GeneID:4334368

Length

2563 bp

Definition

Oryza sativa Japonica Group Os03g0788700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33630834..33633396

Sequence Coding Region

33631122..33631195,33631941..33633306

Expression

GEO Profiles:Os03g0788700

Genome Context

<gbrowseImage1> name=NC_008396:33630834..33633396 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33630834..33633396 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgcgccggtttgtggcgcactcgtgtgcttcttcgttctcctcgttgcccgtgcggccgcggagacggcgccggtggaacgtcccacattgccctcagccgacgtcgccatcgacggtaatggcaacggcgctcgtgctggtgcgggcaaagctgccggcgccggcgccgtgggaggagggatcgtgtcaaactcggtgctggtggcgttgctggactcgcgctacacggagatggcggagctggtggagaaggccctgctgctccaggcgctggaggacgccgtcgccgagcacaacgtcaccatcctcgcgccgcggaacgaggcgctggagcgggacatcgacccggagttcaagcgcttcctgctcgagccgcggaatctcaactcgctccagtcgctgctcctcttccacgtcctccccgcccgcctcccctccggttcctggcccgccgcggccacccacccgacgctcgccggcgaggatgttgagctcgccgcggccgacggcggcggcggcatgcgcgtcgcccacgccgccgtctcgcgcccggacgcggtggtcaggacggatggcgtcatccacgggatcgaccgcctcctcgtgccgcgctccgtccaggacgaattcaaccgccgccgcagcctcgccgacatctccgccatgccgccgacggccgcgcccgaggtggatccgaggacggatcgcctcaagaagccggcgccacccggcgattctcctgtgctcccgatctccgacgcgactgttcccgatccctccgtcgcgctggcgtcggagcccagtgaccactacgacggcgacagccaggtgaaggacttcattcagaccctgctcaagtacggcggctacaacgagctcgccgacatcttcgtcaacctcacctcgctcgccaccgagttagcccagctcgtctccgaagggtacgcgctcaccgtgctcgcgcccaacgacgaggccatggcgcggctcaccgccgaccagctcagcgagcccggctcgccggagaacatcctgtactaccacatgatcccggagtaccagaccgaggagagcatgtacaacgcggtgcggcggttcggcaaggtgcgctacgacacgctgcggctgccgcacaaggtggtggcgcgcgaggccgacggctcagtcaagtttggccatggcgagggctcggcgtatctcttcgacccggacatcttcgccgacggcaggatctcagtgcagggcattgacgccgtgctgttcccgccggctgagacgaagacgaagacgaagccggccaccgcccggatcaggacggcgcccgctatcaccggcgtcagcaagattaaacaccggagaggcaaattgctagaagcagcatgccaaatggttggcatccttggccagcgatcgcaattcacacgctgccagtag</cdnaseq>

Protein Sequence

<aaseq>MGAPVCGALVCFFVLLVARAAAETAPVERPTLPSADVAIDGNGN GARAGAGKAAGAGAVGGGIVSNSVLVALLDSRYTEMAELVEKALLLQALEDAVAEHNV TILAPRNEALERDIDPEFKRFLLEPRNLNSLQSLLLFHVLPARLPSGSWPAAATHPTL AGEDVELAAADGGGGMRVAHAAVSRPDAVVRTDGVIHGIDRLLVPRSVQDEFNRRRSL ADISAMPPTAAPEVDPRTDRLKKPAPPGDSPVLPISDATVPDPSVALASEPSDHYDGD SQVKDFIQTLLKYGGYNELADIFVNLTSLATELAQLVSEGYALTVLAPNDEAMARLTA DQLSEPGSPENILYYHMIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVK FGHGEGSAYLFDPDIFADGRISVQGIDAVLFPPAETKTKTKPATARIRTAPAITGVSK IKHRRGKLLEAACQMVGILGQRSQFTRCQ</aaseq>

Gene Sequence

<dnaseqindica>2202..2275#91..1456#agtgccgcagaaggatccctcgccgacgagggcgcggtagcagcagcacaagcaattcgcgcaggagagaagtggccgcaggccgcagcgatgggcgcgccggtttgtggcgcactcgtgtgcttcttcgttctcctcgttgcccgtgcggccgcggagacggcgccggtggaacgtcccacattgccctcagccgacgtcgccatcgacggtaatggcaacggcgctcgtgctggtgcgggcaaagctgccggcgccggcgccgtgggaggagggatcgtgtcaaactcggtgctggtggcgttgctggactcgcgctacacggagatggcggagctggtggagaaggccctgctgctccaggcgctggaggacgccgtcgccgagcacaacgtcaccatcctcgcgccgcggaacgaggcgctggagcgggacatcgacccggagttcaagcgcttcctgctcgagccgcggaatctcaactcgctccagtcgctgctcctcttccacgtcctccccgcccgcctcccctccggttcctggcccgccgcggccacccacccgacgctcgccggcgaggatgttgagctcgccgcggccgacggcggcggcggcatgcgcgtcgcccacgccgccgtctcgcgcccggacgcggtggtcaggacggatggcgtcatccacgggatcgaccgcctcctcgtgccgcgctccgtccaggacgaattcaaccgccgccgcagcctcgccgacatctccgccatgccgccgacggccgcgcccgaggtggatccgaggacggatcgcctcaagaagccggcgccacccggcgattctcctgtgctcccgatctccgacgcgactgttcccgatccctccgtcgcgctggcgtcggagcccagtgaccactacgacggcgacagccaggtgaaggacttcattcagaccctgctcaagtacggcggctacaacgagctcgccgacatcttcgtcaacctcacctcgctcgccaccgagttagcccagctcgtctccgaagggtacgcgctcaccgtgctcgcgcccaacgacgaggccatggcgcggctcaccgccgaccagctcagcgagcccggctcgccggagaacatcctgtactaccacatgatcccggagtaccagaccgaggagagcatgtacaacgcggtgcggcggttcggcaaggtgcgctacgacacgctgcggctgccgcacaaggtggtggcgcgcgaggccgacggctcagtcaagtttggccatggcgagggctcggcgtatctcttcgacccggacatcttcgccgacggcaggatctcagtgcagggcattgacgccgtgctgttcccgccggctgagacgaagacgaagacgaagccggccaccgcccggatcaggacggcgcccgctatcaccggcgtcagcaagattaaacaccggagaggtcagccaatgtctttagatctgaacttgaatttcctaatcgtacaaaaatttcctcagaaatttacagttcacatcctagattcgggaggttagtcgatgtttttttgttctttctgaaattgtttaagtccatgcatgttgatgctacgaatagtggcgatgaagctggatttggatactaggaatagccaagtaaagtgcagtagtgggtaaatcaaagctgtccaatctatagggaacgaacaagagtgctcgttacaagattggatgatagtgagcagcaagcatatagtattccttgtgcaattgttagctgaccatggattgtgaatcttgctcccttggtgattccttttcttgattaatcaattttaggattgcaacaatgctgattacaaacttatataagttctttggatatttatggcctatgttttcagttgtgactgcaattttgtgacataggatgtgcctttgtggcatagataaattatttgggctttacccttttactgcttgtacggttttacatttgagtttaagttacctcaagccattgtcgtatctcatactacaacaaaaatgccaagattttcctgacacccgttgctgttctttttgacagggtgtctgttaaatgtaatatgacaataatcttctgactccctagactcatattcttaaatcattttgttaaccattccatagtattcttatactttgttccttttaaaatactgcaggcaaattgctagaagcagcatgccaaatggttggcatccttggccagcgatcgcaattcacacgctgccagtagacaggaaagattgatctcatgatactgaaacacggtctagaggtgatagactctgctggggccatccacatatggttgttttattttgtttaaaaatgagtagtaaatcaggtgggcaatataagcaggtgtgtataggtgtgtcttacggcaggaaaaaaaatcatacttgaacaccaaaatcttctgtgtataggagggtttgttttgttcgttgttcttgctactgtttctgacagaatcttaatcttgagtaaagatcgcagcatcccatgggttaaaagcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0788700, RefSeq:Os03g0788700