Os03g0790900

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Revision as of 13:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0790900| Description = Similar to Aldehyde oxidase-2| Version = NM_001058053.1 GI:115455834 GeneID:4334382| Length = 7056 bp| Definition =...")
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Gene Name

Os03g0790900

Description

Similar to Aldehyde oxidase-2

Version

NM_001058053.1 GI:115455834 GeneID:4334382

Length

7056 bp

Definition

Oryza sativa Japonica Group Os03g0790900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33730090..33737145

Sequence Coding Region

33730261..33730469,33730552..33730741,33730873..33730971,33731108..33731203,33731517..33732470
,33732792..33733010,33733391..33733600,33733726..33733988,33734150..33735826
,33736811..33737021

Expression

GEO Profiles:Os03g0790900

Genome Context

<gbrowseImage1> name=NC_008396:33730090..33737145 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33730090..33737145 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctcccgtcgtctctcgccgtctcgtcacacgaggaggaagaggtcgatcgatcgatcgagatggggtcagaggcggcggcggcgaggccggtggtggtgacggtgaacggggagaggtacgaggcggtgggggtcgacccgtcgacgacgctgctcgagttcctccgcacgcggacccccgtccggggccccaagctcggctgcggcgaaggtggatgcggcgcatgcgtggtcgtcgtttccaagtacgacgccgtcgccgacgaggtgaccgagttctcggcgagctcctgcctgacgctgctcggcagcctgcaccactgcgcggtcaccaccagcgagggcatcggcaactccagggatggcttccacgccgtgcagcggcggctctccggcttccacgcctcgcagtgcggcttctgcaccccgggcatgtgcatgtccatctactccgcgctcgccaaggccgacaggtgctcgtcccgtccctcgccgccgccggggttctccaagctcaccgccgctgaggccgagaaggccgtctccggcaacctgtgccgctgcaccggctacaggcccatcgtcgacgcgtgcaagagcttcgccgccgacgtcgacctcgaggaccttggcctcaacgccttctggaagaaaggcgccgacgacgagcgcgctgacgtcggcaagctgcctgcatactctggtggcgccgccgtctgtacgttcccggagttcctcaagtcggagataaggtcatccatgggtcaagcgaatggtggcgctccggcggtggcggtcaccggagacggctggttccaccccaagagcgtcgaggagttccacaggttgtttgactctaacctgttcgacgaaaggtctgtgaagattgtggcatcgaacaccggctccggagtgtacaaggatcaagacctccatgacaagtacatcaacatctcgcagattctggaactctcagccatcaatagaagcagcaagggcgtcgagatcggagctgtcgtgtctatctccaaagccattgagatattgtcggatggaggcgcagtgttcagaaagattgccgatcacctgagcaaagtggcctcgtcgttcgtccagaacacggcgaccattggaggcaacatcatcatggcgcagaggctgtctttcccgtcggacatcgcaacggttcttctcgctgcaggatcaactgtcaccatccaggtggccgccaagaggatgtgcatcactctggaggagttcttgaagcagcctccatgtgattccaggacgttgttggtcagcatctctatcccggattggggttcagatgatggcatcacctttgagtcgtttcgtgcggctcctcgtccacttggcaatgctgtgtcatatgttaattctgcattcttggcaagaagttcagtggatggatcatcagggagccatctcattgaggatgtttgcttggcatttggcgccttcggggccgaacacgccatcagagctagggaggttgaggagttcttgaagggaaaattggttagtgcaccagtgatacttgaagcagttcggcttcttaaaggtgttgtttcaccagctgaaggcacaacacatcctgaatacagagtcagcttggccgtcagttatctgttcagattcctgacttcccttgctaatggcttggatgagcctgaaaatgctaatgttcccaatggttcatgtactaatggaaccgcaaacggtagcgctaattcctctccggagaagcactcaaatgttgacagctctgatttgccaataaaatcaaggcaagagatggttttctctgatgaatacaaacctgttggaaagccgatcgagaaaaccggagcagagctccaagcttctggagaggcagtgtatgttgatgacatccctgctccgaaggattgcctctatggagcatttatctatagcacacaccctcacgctcacataaaagatataaacttcagatcatctttggcttcacagaaggtcatcacagttatcactgcaaaggacattcctaccggtggagaaaatattggatcatgcttcccaatgcttggagatgaagcgcttttcgttcatcctgtttctgaatttgccggccagaatattggtgttgtgattgctgaaacacaaaagtatgcctatatggcggcgaagcaagctgtgatcgaatatagtaccgaaaatcttcagccaccaattctgacaatagaagatgctgtccagcataacagctacttcccagttcccccatttttagctcctacgccaattggtgacttcaaccaagctatgtctgaagctgatcacaagatcatagatggggaggtgaaacttgaatcccagtactatttctacatggagacacagacggccttagctatccctgatgaagataactgtataaccctctatgtgtcggcgcaactacctgagattactcaaaatactgttgcgaggtgccttggcattccatatcacaatgtccgtatcatcacgagaagagttggaggaggttttggtggaaaggcaatgaaagcaatacatgttgccgctgcatgtgctgtcgccgcattcaagctgcggcgtccggttcgaatgtacctcgatcgcaagacagacatgatcatggcgggagggcggcatccgatgaaggtaaagtactccgtcggtttcaagtccgacggcaagatcacgggtctgcactttgatcttggaatgaacggcggaatatcgccggattgcagcccggtgttgccagtcgccattgtcggggctctgaagaagtacaactggggcgctctctccttcgacatcaaggtctgcaagacgaacgtctcgtcgaagtcggcgatgcgggctcccggcgacgcgcagggctcgttcatcgccgaggccatcgtcgaacacatcgcgtccactctctcagtggacacgaacgccatcaggaggaagaacctccacgacttcgagagcctcaaggtgttttatgggaatagcgccggtgatccttcgacgtacagtctcgtcaccatcttcgacaagctggcctcgtcgccggagtaccagcagagggccgccatggtcgagcacttcaacgccggcaacaggtggaagaagcggggcatttcttgcgtgccgatcacctacgacgtgaggctccggccaactccggggaaggtgtccatcatgaacgacggctccatcgccgttgaggtcggcggcgtcgagatcgggcaggggctgtggacgaaagtgaagcagatgacagcgttcgcgctgggccagctctgcgatgatggcggcgagggcctcatcgacaaggtccgtgtcatccaggccgacaccctgagcatgatccagggaggcttcaccggtgggagcacgacctccgagactagctgcgaggctgttcggaagtcgtgcgccgccctcgtggagaggttgaagcccatcaaagagaaggctggcacgccaccatggaaatcccttattgcccaggcaagcatggcgagtgtgaagctgacagagcacgcgtactggacgcctgaccccacgttcactagctacttgaactatggagctgcaattagtgaggtggaagtcgatgtgctgacgggagaaaccaccatcctgaggagcgacctcgtgtacgactgtgggcagagcctgaatcctgctgtggacttgggccaggtggaaggcgcattcgtgcaagggatcggcttcttcacgaacgaggagtacacgaccaactccgatgggctggtcatcaacgacggcacgtggacgtacaagatccccaccgtggacaccatccccaagcagttcaacgtcgagctcatcaacagcgcccgcgatcacaagcgcgtcctctcctccaaagcgtccggtgagccgccgctgctgctggcgtcgtcggtgcactgcgcgatgagggaggcgatcagggcggccaggaaggagttcgccggcgccggaggctcgccgctgacgttccagatggacgtgccggcgacgatgccgatcgtcaaggagctctgcggccttgacgtcgtggagagatatctcgagagctttgctgccaaagcctag</cdnaseq>

Protein Sequence

<aaseq>LPSSLAVSSHEEEEVDRSIEMGSEAAAARPVVVTVNGERYEAVG VDPSTTLLEFLRTRTPVRGPKLGCGEGGCGACVVVVSKYDAVADEVTEFSASSCLTLL GSLHHCAVTTSEGIGNSRDGFHAVQRRLSGFHASQCGFCTPGMCMSIYSALAKADRCS SRPSPPPGFSKLTAAEAEKAVSGNLCRCTGYRPIVDACKSFAADVDLEDLGLNAFWKK GADDERADVGKLPAYSGGAAVCTFPEFLKSEIRSSMGQANGGAPAVAVTGDGWFHPKS VEEFHRLFDSNLFDERSVKIVASNTGSGVYKDQDLHDKYINISQILELSAINRSSKGV EIGAVVSISKAIEILSDGGAVFRKIADHLSKVASSFVQNTATIGGNIIMAQRLSFPSD IATVLLAAGSTVTIQVAAKRMCITLEEFLKQPPCDSRTLLVSISIPDWGSDDGITFES FRAAPRPLGNAVSYVNSAFLARSSVDGSSGSHLIEDVCLAFGAFGAEHAIRAREVEEF LKGKLVSAPVILEAVRLLKGVVSPAEGTTHPEYRVSLAVSYLFRFLTSLANGLDEPEN ANVPNGSCTNGTANGSANSSPEKHSNVDSSDLPIKSRQEMVFSDEYKPVGKPIEKTGA ELQASGEAVYVDDIPAPKDCLYGAFIYSTHPHAHIKDINFRSSLASQKVITVITAKDI PTGGENIGSCFPMLGDEALFVHPVSEFAGQNIGVVIAETQKYAYMAAKQAVIEYSTEN LQPPILTIEDAVQHNSYFPVPPFLAPTPIGDFNQAMSEADHKIIDGEVKLESQYYFYM ETQTALAIPDEDNCITLYVSAQLPEITQNTVARCLGIPYHNVRIITRRVGGGFGGKAM KAIHVAAACAVAAFKLRRPVRMYLDRKTDMIMAGGRHPMKVKYSVGFKSDGKITGLHF DLGMNGGISPDCSPVLPVAIVGALKKYNWGALSFDIKVCKTNVSSKSAMRAPGDAQGS FIAEAIVEHIASTLSVDTNAIRRKNLHDFESLKVFYGNSAGDPSTYSLVTIFDKLASS PEYQQRAAMVEHFNAGNRWKKRGISCVPITYDVRLRPTPGKVSIMNDGSIAVEVGGVE IGQGLWTKVKQMTAFALGQLCDDGGEGLIDKVRVIQADTLSMIQGGFTGGSTTSETSC EAVRKSCAALVERLKPIKEKAGTPPWKSLIAQASMASVKLTEHAYWTPDPTFTSYLNY GAAISEVEVDVLTGETTILRSDLVYDCGQSLNPAVDLGQVEGAFVQGIGFFTNEEYTT NSDGLVINDGTWTYKIPTVDTIPKQFNVELINSARDHKRVLSSKASGEPPLLLASSVH CAMREAIRAARKEFAGAGGSPLTFQMDVPATMPIVKELCGLDVVERYLESFAAKA</aaseq>

Gene Sequence

<dnaseqindica>6677..6885#6405..6594#6175..6273#5943..6038#4676..5629#4136..4354#3546..3755#3158..3420#1320..2996#125..335#catgctgcgcccccactccagtggaggagtactccactaggcggccactcctgttgacgccgagtataaacaaaacccaaaagcggcgagagcaaccaaagcccaagtttgtggggggcaatagctcccgtcgtctctcgccgtctcgtcacacgaggaggaagaggtcgatcgatcgatcgagatggggtcagaggcggcggcggcgaggccggtggtggtgacggtgaacggggagaggtacgaggcggtgggggtcgacccgtcgacgacgctgctcgagttcctccgcacgcggacccccgtccggggccccaagctcggctgcggcgaaggtgagagctaccaccaccatgcatgtcggcgctgccatctctctcccttctcgatcttcttctcctttctcgtgggaatcttgagctatactggtcaaatccattccatttgttcattcctttcttagtctgtccagtttctagtctgttttgacggtcaagtgattgagtctgcgtgtagtttttctcgccaggtaaaatctccatgtatagttaagtagtactattactgttttatttggtgttttccggatgtggccacagaattagtactgttttttttagcaccatttagctcacctgatcgctggagtacactagtattgtgctgatgtacagtatttcacagcatgagaaaactagtggagtactacaaaacatgtcctccaggaagaggaaattaactgtacgtaagtacatatcgcgcagaatagtgtagcaataaattaattagaacaaaccaagaagaaggtgcccagtagcttactggattatcgtgttatttgcagttgttggagcgaagtagctagcgacagcgccatctcaattctaaaacgaatcatccagctttccgcctgcaaattgttttttttttttgtttttcttttgtcctttttctataggtatcactatcaggtagcaagtatatatgcaactactataacagttctcaattctggatacttccagcttttctccttaaatttaatccataaagctgagtggtccgttttccacaatgcttttcctgagataatgagaaaatgattttctttgaattcacaaaagttaacagacacctcatcagtgactgacatgacagttcatcagtaatcagatgatgtttctgcatcagcaacagtgcgcaatacaagcagttgcaatcagtagacctaaggatttctactgtactaagtaacagtgatggtaattatcaattagacagtacgaataacttactgaggatatcattttttttttcaggtggatgcggcgcatgcgtggtcgtcgtttccaagtacgacgccgtcgccgacgaggtgaccgagttctcggcgagctcctgcctgacgctgctcggcagcctgcaccactgcgcggtcaccaccagcgagggcatcggcaactccagggatggcttccacgccgtgcagcggcggctctccggcttccacgcctcgcagtgcggcttctgcaccccgggcatgtgcatgtccatctactccgcgctcgccaaggccgacaggtgctcgtcccgtccctcgccgccgccggggttctccaagctcaccgccgctgaggccgagaaggccgtctccggcaacctgtgccgctgcaccggctacaggcccatcgtcgacgcgtgcaagagcttcgccgccgacgtcgacctcgaggaccttggcctcaacgccttctggaagaaaggcgccgacgacgagcgcgctgacgtcggcaagctgcctgcatactctggtggcgccgccgtctgtacgttcccggagttcctcaagtcggagataaggtcatccatgggtcaagcgaatggtggcgctccggcggtggcggtcaccggagacggctggttccaccccaagagcgtcgaggagttccacaggttgtttgactctaacctgttcgacgaaaggtctgtgaagattgtggcatcgaacaccggctccggagtgtacaaggatcaagacctccatgacaagtacatcaacatctcgcagattctggaactctcagccatcaatagaagcagcaagggcgtcgagatcggagctgtcgtgtctatctccaaagccattgagatattgtcggatggaggcgcagtgttcagaaagattgccgatcacctgagcaaagtggcctcgtcgttcgtccagaacacggcgaccattggaggcaacatcatcatggcgcagaggctgtctttcccgtcggacatcgcaacggttcttctcgctgcaggatcaactgtcaccatccaggtggccgccaagaggatgtgcatcactctggaggagttcttgaagcagcctccatgtgattccaggacgttgttggtcagcatctctatcccggattggggttcagatgatggcatcacctttgagtcgtttcgtgcggctcctcgtccacttggcaatgctgtgtcatatgttaattctgcattcttggcaagaagttcagtggatggatcatcagggagccatctcattgaggatgtttgcttggcatttggcgccttcggggccgaacacgccatcagagctagggaggttgaggagttcttgaagggaaaattggttagtgcaccagtgatacttgaagcagttcggcttcttaaaggtgttgtttcaccagctgaaggcacaacacatcctgaatacagagtcagcttggccgtcagttatctgttcagattcctgacttcccttgctaatggcttggatgagcctgaaaatgctaatgttcccaatggttcatgtactaatggaaccgcaaacggtagcgctaattcctctccggagaagcactcaaatgttgacagctctgatttgccaataaaatcaaggcaagagatggttttctctgatgaatacaaacctgttggaaagccgatcgagaaaaccggagcagagctccaagcttctggtacatactctctcatcataaattcctattatcaatccaaactcacatgttttacttttaattactatttcgaatactacaatctaaattcgtgctacccatgttagagcatcttagaggcttggattttcatagcctgaacatctgaacttgatatgcaggagaggcagtgtatgttgatgacatccctgctccgaaggattgcctctatggagcatttatctatagcacacaccctcacgctcacataaaagatataaacttcagatcatctttggcttcacagaaggtcatcacagttatcactgcaaaggacattcctaccggtggagaaaatattggatcatgcttcccaatgcttggagatgaagcgcttttcgttcatcctgtttctgaatttgccggccagaatattggtgttgtggtacttacatctaaaccacctgaactttctttcagatgaggcataactagtaatatgtctgaatatttagaaattttgtgaataaattcgagcttaccatgtcatattgccttgctatcattcagattgctgaaacacaaaagtatgcctatatggcggcgaagcaagctgtgatcgaatatagtaccgaaaatcttcagccaccaattctgacaatagaagatgctgtccagcataacagctacttcccagttcccccatttttagctcctacgccaattggtgacttcaaccaagctatgtctgaagctgatcacaagatcatagatggggaggtatgtacttaaacactttgaatataatagatacagaagttatagtctcctgaactcatgacttaattaggtactccctccgtttcacaatgtaagtcattctagtattttccatattcatattaatgctaatgaatctagatagatatatatgtctagattcattaccatcaatatggatgtgggaaatgctagaatgacttacattgtgaaacggaggaattagtttagtagtagaacaattttgatgcgcattatctattgaacagcaggtgctaagaaagaaaggagtaaccaagatcgtagaagattattatagtcagagttcctgacaactttacgagagatacttacacccgatttctatttttttgttacaggtgaaacttgaatcccagtactatttctacatggagacacagacggccttagctatccctgatgaagataactgtataaccctctatgtgtcggcgcaactacctgagattactcaaaatactgttgcgaggtgccttggcattccatatcacaatgtccgtatcatcacgagaagagttggaggaggttttggtggaaaggcaatgaaagcaatacatgtgagcatctgactatgatgatttgcatttgcagaacaattatattcttgaactggtggaatttctcgtctaactctgtagttattcgtactacaatgcatatgcttttgtttaacaattataatagtagtacaatagtatttcataactaaaaatattgtgagaacttaatacatatttcattgttgtaggctattttagaatgtgaaccaaccatggacggtttaaatctctgtttgataacgtcattagcttgaaattacaaactgtttggaatgcagaatgatcttgatatgaccagaagtacctgttgcttgacaggttgccgctgcatgtgctgtcgccgcattcaagctgcggcgtccggttcgaatgtacctcgatcgcaagacagacatgatcatggcgggagggcggcatccgatgaaggtaaagtactccgtcggtttcaagtccgacggcaagatcacgggtctgcactttgatcttggaatgaacggcggaatatcgccggattgcagcccggtgttgccagtcgccattgtcggggctctgaagaagtacaactggggcgctctctccttcgacatcaaggtctgcaagacgaacgtctcgtcgaagtcggcgatgcgggctcccggcgacgcgcagggctcgttcatcgccgaggccatcgtcgaacacatcgcgtccactctctcagtggacacgaacgccatcaggaggaagaacctccacgacttcgagagcctcaaggtgttttatgggaatagcgccggtgatccttcgacgtacagtctcgtcaccatcttcgacaagctggcctcgtcgccggagtaccagcagagggccgccatggtcgagcacttcaacgccggcaacaggtggaagaagcggggcatttcttgcgtgccgatcacctacgacgtgaggctccggccaactccggggaaggtgtccatcatgaacgacggctccatcgccgttgaggtcggcggcgtcgagatcgggcaggggctgtggacgaaagtgaagcagatgacagcgttcgcgctgggccagctctgcgatgatggcggcgagggcctcatcgacaaggtccgtgtcatccaggccgacaccctgagcatgatccagggaggcttcaccggtgggagcacgacctccgagactagctgcgaggctgttcggaagtcgtgcgccgccctcgtggagaggttgaagcccatcaaagagaaggctggcacgccaccatggaaatcccttattgcccaggtaaattcttgtttgagttttctcgtccttaaaaaaactacttcctccgtttcacaatgtaagtcattttaacattgtccatattcatattaatattaataaatctagatagatatatttgtctaaattcattaacatcaatatgaatgtgggaaatgctaatatgacttatattgtgaaacggagggagtaataactttttcagtaaactgcaagcatcagtaaggaaatcttgttttctgaaagatcattgtgtctgacagcgttgtaaatttacaaatttgtgatggcatttgctcgttctcgctttcaggcaagcatggcgagtgtgaagctgacagagcacgcgtactggacgcctgaccccacgttcactagctacttgaactatggagctgcaattagtgaggtacacactaaagatacccagatacaaattacaacagaagctctgaaaatgcatttgccgagccaatttgctgagcttgatctccttctcaaagctaatgcattgtccatccaaaatctgcacatgaacactccaggtggaagtcgatgtgctgacgggagaaaccaccatcctgaggagcgacctcgtgtacgactgtgggcagagcctgaatcctgctgtggacttgggccaggtcagtcaatctactaaattaccttcaaaatatcagttgcatctgcaattctgcgcgttgcaaaatcattgcaagaatgagatgtaaattatatgtgatctgaatgtgcaatcgttgttttttgtgatcaggtggaaggcgcattcgtgcaagggatcggcttcttcacgaacgaggagtacacgaccaactccgatgggctggtcatcaacgacggcacgtggacgtacaagatccccaccgtggacaccatccccaagcagttcaacgtcgagctcatcaacagcgcccgcgatcacaagcgcgtcctctcctccaaaggtgaaaatctcttcttcgtttgctccttttttttttctcaaatctgaattctgatattgttgctgtccttcatggcatgcagcgtccggtgagccgccgctgctgctggcgtcgtcggtgcactgcgcgatgagggaggcgatcagggcggccaggaaggagttcgccggcgccggaggctcgccgctgacgttccagatggacgtgccggcgacgatgccgatcgtcaaggagctctgcggccttgacgtcgtggagagatatctcgagagctttgctgccaaagcctagagatagaagggttctttggcttagctttgtataaacaccaacaataatctgcgcctggatttgtgttgatgtggtatatatgtacagaacaaaaggtgtttttttgggaaaaataaaatcatatggatggtattgttctatcatgtctcatggagtcatgctatccaaatg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0790900, RefSeq:Os03g0790900