Os03g0791800

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Revision as of 13:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0791800| Description = Rad6 (Ubiquitin carrier protein)| Version = NM_001058057.1 GI:115455842 GeneID:4334386| Length = 5177 bp| Definitio...")
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Gene Name

Os03g0791800

Description

Rad6 (Ubiquitin carrier protein)

Version

NM_001058057.1 GI:115455842 GeneID:4334386

Length

5177 bp

Definition

Oryza sativa Japonica Group Os03g0791800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33780995..33786171

Sequence Coding Region

33781251..33781379,33781852..33781940,33782059..33782148,33785680..33785705,33785881..33786005

Expression

GEO Profiles:Os03g0791800

Genome Context

<gbrowseImage1> name=NC_008396:33780995..33786171 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33780995..33786171 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggacccgcccgccggaatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtcatattcggaccggatgacacgccgtgggatggaggcacgttcaagctgacactacaatttacagaagattatcccaacaaaccaccagttgttcggtttgtctcaaggatgtttcacccaaatatttatgcagatggaagtatctgcttggatatcctacaaaatcaatggagccctatatatgatgttgctgcgatattgacctctatccagtccctgctctgtgatccaaacccaaactcccctgcaaactccgaagcagccagactgttcagcgagaacaagcgcgagtacaaccgcaaagtccgcgagattgtggagcagagctggacggccgactaa</cdnaseq>

Protein Sequence

<aaseq>MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPD DTPWDGGTFKLTLQFTEDYPNKPPVVRFVSRMFHPNIYADGSICLDILQNQWSPIYDV AAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRKVREIVEQSWTAD</aaseq>

Gene Sequence

<dnaseqindica>4793..4921#4232..4320#4024..4113#467..492#167..291#acctggcgcgccgaagcttctctcctctctctcaactccggcgagaggaggaggcggcggtggggcgttcgtcgggagagagaccagggccggggggctagggttcggccgttcagagaggcggcggctgaggaggaggaggaggaggaggagggggtgaggagagatgtcgacgccggcgaggaagcggctgatgcgggacttcaagcggctgcagcaggacccgcccgccggaatcagcggcgcgccgcacgacaacaacatcatgctctggaacgccgtcatattcgggtagccacccacgcgccgtagccaccctcatctcaggcgctaggttttggagccgaggggatctcgcagagcttgtgattttcctattcgttgtggagttattttttttaattttttgtgtgggttgatttggttctgatgtcgtttgcttgtcatgtctggtacgattttgcagaccggatgacacgccgtgggatggaggtgagtccatttgacttttccccttattttgttctgatcaagatatctagttactagtgattgtgataatttggtgtttggtgaatgaaaaattaatgttatgcggatttgcaagttatcagatactgcgcgtaaaggttccattttgttcatctgatttcacgtgtaaaaaagaggaaacaccgaaacagcaacctccctacttaaactcaactttgtgcttcgttttgtttacgtcttggttcgcttctgatacaggaagcttataattaagccatttgtgactgtgatgcattcttgtttactgaaaagttagagcttgatcttctgatgcgtttgatttgtgctttattgacaaggctttcactaggtaatgaaaaagcatatgattggcatgtttatgaaattacaggctgtatgcatttttacccaacaaatgcggacactctaacaagtaaacgacactttagagtagaaaatgagtagctctttctcatacagcgtggcatgctaacaataacaagcacacacattagagctcttataagaactttctccataccacttggaattataaatcgaagaacatacccataacgttctcatcggagttactttatctgcagtactcagagcatgttatgatcaggtttggttattgtgctgctctgtgaaatgtggttgtttacaagaatctttactgatccataggattacttttgttatggcaaaaaggaaagtgtttccaacctagtttttgtggtgaaaagtagggaaaagcttttgaaaagccatcacagagccaagtatgagccttaatagaattctgctcatctcttgcttaatcatactcttagacttatagagtccaggaaggctaatgggtgatcagtcgcgcgcgccttcccccgcttgactcgacacgtgtcgtgcggggagggggcacgggcggcggcacggcgcgcagtttcttttttttttctttcccctcctcccccgcacgttcctttcttttagttttttctgttttttttccgcagtttttttgtttgttttttgcgcacggttttttaatacgtacgtgtacaaactttgtatacacgttacaaagttcatatatgtgtatacaaagttcgtatatgtgtttttttaatatgtacatatacaaactttgtatacgtcgtatacaaactttgtatatatcgtatacaaacttttgtatatgtgtatatattttttatacataaaaaatgtatacatattaatattaatacacacacacacaatatatgtactttgtatagacgtatataaagtttatacgtatatatataaaaagtattttatacgtatgtatataaagtatatacatacgtatatacatgcactgtagaggagagagtcagagagactaaagacgttagaactgaccgtgcgcgactgatcgccaatcagccaccccctatagagtctgttagtcttaaatttgaaaatatattttttttcataatttgcgtatacacgggcgctgaggaatagcagaaatattcctattccgcgagctggagatgcgggagcgcgacgatactgcaggctggcggcgcaggggcacggtaccgtagcacgggagtgcgggaccggctcggtcgcgcagaccgggggtgcagaaccgagtcggtcccgcgcggcggctgtgcgcgttgctgtagcccacgggaccgcctgccagcccggccgatcgcgcagaacggtggcgcgggtccaaagcggtctcgcatgaccaagctgcggcaccgagccggtctcgtagggctccggtgctgctttcctaaagcgcgggagcgcactctcttcgcatccccattaagctgcaccgcactgaaagttgtttgtcccctggctccatgtgacatgcctagcgagaaacggcaccgcaccgaaagttgtttgtcccctgccgtcagctccatgtgacatgctcagccaggaacaaatgggagagcgattgtcttctctcttagcttttttcatatggcgtccgccgaaagttttttgtcgtctggttagagagcttactcgtcgagtgcctatagaagggaacgttacgaaatgaaagaagcagactcaagtatagcatataactcatatttgtagactttatcattggtgtaagcttcaatatgttagtgcgcttggcgaattcgcatgccctatcttgtggtatgaactgagcacacgataatttatggtgcgtattgggggcttacaataagataatgccgtgaatttgctaagcgttcaaacccactgaagtgttgtgtgaaggtaaatatttgtaagtgttcgtgaaggaaagacatgcaaatattttgaatttatttatttagaaatgtagctgacatattagaaagttttaacacacaacattacatattaattagaataagaaaaatataaaatcgttctactcattagcctcatcatcgaaatttcaggatgtgctagtgtcctttttctttccctttcttctagcaccagctggaggtctgcgtcttgacaaaaataatctttcaggtgaatgtcgctcgcgaacagacctacgtgccacctaaataccgttgaaatcaacgtgcctgtagtcttgggtcagctgagttattggaggcggttcatcaatctgcgacggtcctatctcgtgttgtgctgttgacgaccccccaccgtagctacatggttctctgtaggactgtgtgctgccggcatatcccattatttattgggggtgtacattcctacaaaacattgaatccaaagttgtagcgcacacacatactggaactaaaatattttatagtaaattacaatttgtacccgttgtttgtggttgcatgataggtgcttaggagttatgccatgtagctaatttagctatcatattagcaagaatagggatacctcgtttaaaatggagccattctatttgtgaacattggagtaagaaattgtagacttaatttttggaagctctttaagtatagccgattgttatcatttatcaatcatcaggacaaaataaagtagttcttttgggtgcggttagaccatgtcaccatgactaaatcttcattgtttaactttgatattttttagcaatagtgtgatgggaccatagcaattagatggcagcttcatttgatggcctatttattgtttgaaatcaactacaaaagagtgatagaatgtataggaaaaatcaccggatggaaactctttttagtatttggtgaccacattttttgcatatggtacctccaatcttatggccttcaaataattgatgaaatgcttttgacatacacaattggtaacatgatcactccctttgtctttgtatgtcaggattgcaaatttgcaacctcatgtaatcctttaaaatcacatcgattgaaatgaagtatgttttgtggtgttattacttatgaacattatttcatgtttaagttagtactaataagtgattttgtcacataggcacgttcaagctgacactacaatttacagaagattatcccaacaaaccaccagttgttcggtttgtctcaaggatgtttcacccaaatagtatgtctcataacttgataatttgaccacttcattatctttgcaagctactacattattcccaagagattgaattattgaagatatacacaactaattgtttttgttatccgttcagtttatgcagatggaagtatctgcttggatatcctacaaaatcaatggagccctatatatgatgttgctgcgatattgacctctatccaggtatcatttgaaccttcgcagagtgtcctaacaatcacatcgatagcttcacttggtttaatgctttcccctggttgtagctcacttgattacaatcatttatatatgatagaaaatacacgcatattctgtatttttgtcatgtcattggtgtagaggtaattccaatattgaggaaatcctttcctcctactatagttgcatacaccaaagtcattattgacagtcgttattgttttccaaacaacctgctatatgggtaatgtgacaccgataaattagttatcaatagcatctgcagcctgattctaggatgattagagcctttcatccatgtcatgttgctgtacgggttattgacctacatttgctgacaaataatggcttgggggaccatagttgatgtcttcctgcctgtaatcctcagttccacattgagcttagctgtttctgttttgccttttatctgcagtccctgctctgtgatccaaacccaaactcccctgcaaactccgaagcagccagactgttcagcgagaacaagcgcgagtacaaccgcaaagtccgcgagattgtggagcagagctggacggccgactaagccaaggacatgattgagttgcagtttctgcaacaagcttctcctaaagatatgcaattctggctttcccggtctgtatcacctactaaaaacataaaaaatcttcagttgttgtaattcctgagcttgatcccctgccttcccctacttgttttcccaatgtagtggctacctatttgatgaatttataaggtattgatgcttatgtaaagaattatactccctagccaagaagttgctgttgctgctaggttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0791800, RefSeq:Os03g0791800