Os03g0792400

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Revision as of 13:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0792400| Description = Peptidase M50 family protein| Version = NM_001058058.1 GI:115455844 GeneID:4334387| Length = 5230 bp| Definition = ...")
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Gene Name

Os03g0792400

Description

Peptidase M50 family protein

Version

NM_001058058.1 GI:115455844 GeneID:4334387

Length

5230 bp

Definition

Oryza sativa Japonica Group Os03g0792400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33802239..33807468

Sequence Coding Region

33802241..33802483,33802657..33802743,33803407..33803877,33803973..33804116,33804679..33804780
,33805279..33805490,33805932..33805982,33806068..33806137,33806417..33806485
,33807007..33807057,33807147..33807305

Expression

GEO Profiles:Os03g0792400

Genome Context

<gbrowseImage1> name=NC_008396:33802239..33807468 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33802239..33807468 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccctatcctttccgcagctggtttccccctcccgcctccgaccacccacgtcatcaccacagcgacctctactccactctgccccgccgcccatggccgccgccgccgcggcgctcgcgagctcccccatggtccacctcacggcctcccggctccgcctccccaggcccgccaggtcccccgcggcggcgacgccctcaccctctcccgcgtccgccgcgtgctgctcgaggggcgcggcatgcgaaggtaggtggcgcggtggaggagatgagatccgagcggacccgctccggtagcttctcttcgtcctcgtcgtcgtcgtcagggacacccggtatatccaatgagccaccatttttgagcttcagtgttgataacatcgacacagtaaagttattggaactcctagggcccgaaaaagttgattcagctgatgtcaaggctattaaggaaaaacttttcggctacacaacattctggttgacaagagaagaaccttttggtgatcttggggaaggggtcctttttattgggaacctccgagggaagagagaagaaatatttgcaaaacttcaacagcagttacgtgaactcacaggtgacaaatacaatctttttatggtggaggagcccaattcagaaggggaagacccacgtggaggaccacgtgttagttttggtttgctcagaagagaagtttcagaacctggacctactacattgtggcaatatgtcatttcactgttacttttccttctaactgtgttctcttgtgttgagctaggaattgcatcaaagattagcagtcttccaccagagattgttacatatttcactgatccaaatgctactggacccccacctgatatgcaactcttacttccatttgtggaatcagctttgccggtggcttatggtgtcttggctatccaactatttcatgaagttggtcactttttggcagcatttccaaagaaggttaaactaagcattcctttcttcattccgaacttcactctaggaacttttggcgcaattactcagttcaaatccattctgccggataagaagacaatgtttgacatatcaatggctggtcctcttgctggagctgcactttctttctcaatgttctctgtaggcttgttgctctcctcaaatcctgctggggcaagtgatttagttgaagtacctagcaagctattccagggttccttgttgctcggacttgttagcagagcaacacttggctacagagctatgcatgctgctacagttgctatccaccctcttgtgattgcaggctggtgtggtttaacgactactgcctttaatatgcttcctgttggatgtcttgatggtggaagagctttacagggtgctttcggcaaggatgcgttgtttggatttggcttgacaacatactcattgcttggactcggggtgcttggggggccactatctcttccttggggcttatacgtgctaatatgtcagagaacacctgaaaagccctgcttgaatgatgtgagcgatgtcggaacgtggaggagagcagcattgatagtttcagtgtttcttgttgtattgactctcattccactctgggatgaacttgcagaggacctaggtgtaggacttgtgacttctttctga</cdnaseq>

Protein Sequence

<aaseq>PYPFRSWFPPPASDHPRHHHSDLYSTLPRRPWPPPPRRSRAPPW STSRPPGSASPGPPGPPRRRRPHPLPRPPRAARGARHAKVGGAVEEMRSERTRSGSFS SSSSSSSGTPGISNEPPFLSFSVDNIDTVKLLELLGPEKVDSADVKAIKEKLFGYTTF WLTREEPFGDLGEGVLFIGNLRGKREEIFAKLQQQLRELTGDKYNLFMVEEPNSEGED PRGGPRVSFGLLRREVSEPGPTTLWQYVISLLLFLLTVFSCVELGIASKISSLPPEIV TYFTDPNATGPPPDMQLLLPFVESALPVAYGVLAIQLFHEVGHFLAAFPKKVKLSIPF FIPNFTLGTFGAITQFKSILPDKKTMFDISMAGPLAGAALSFSMFSVGLLLSSNPAGA SDLVEVPSKLFQGSLLLGLVSRATLGYRAMHAATVAIHPLVIAGWCGLTTTAFNMLPV GCLDGGRALQGAFGKDALFGFGLTTYSLLGLGVLGGPLSLPWGLYVLICQRTPEKPCL NDVSDVGTWRRAALIVSVFLVVLTLIPLWDELAEDLGVGLVTSF</aaseq>

Gene Sequence

<dnaseqindica>3..245#419..505#1169..1639#1735..1878#2441..2542#3041..3252#3694..3744#3830..3899#4179..4247#4769..4819#4909..5067#acccctatcctttccgcagctggtttccccctcccgcctccgaccacccacgtcatcaccacagcgacctctactccactctgccccgccgcccatggccgccgccgccgcggcgctcgcgagctcccccatggtccacctcacggcctcccggctccgcctccccaggcccgccaggtcccccgcggcggcgacgccctcaccctctcccgcgtccgccgcgtgctgctcgaggggcgcggcatgcggcttggagtggagacccaagtctgggctgagggccctgaggcggtgcgaggaccggctgcggtgcttctccatcgacgggggagggggtgggggcgggggtggcggcggaggaacgggcggggaggacggggagaagcggggcgaggaggaggcggcggcggcggcggaggcgaaggtaggtggcgcggtggaggagatgagatccgagcggacccgctccggtagcttctcttcgtcctcgtcgtcgtcgtcaggggtaaggcgtgctgtggtttgctgattactcgttgattagcttttgagcattttgatggagtattgtattgcagttggagatgtagttagactttcggtcgggtgcagggagcatcataatactgaatttttgttgaatatagtaggaatggtaactttattggctcgtttacttctattccgaacaccaaacttgatcgagtgggtggcagaactccgtacaagtagagttttagattgatggcagtatggcacattatccatttccactaaaagtagcaattttactatcagtatgtcaggaaagacattcactagttactagtgagaaacgcggggatgaaacctctatattgatttcttggttatcaaactacagagctgctctaatgcagattgccccccttcattaatcattgggtattctagcactagttgtctctgctatgttttacaataacttgaccataacaagtggtttatgttttgtcatcaatctcgtacttttcaattaacttaacaataatgcgtcacttatttgtctttacctttttcttaagaagacacacatccatgttctttttaacctgtgaaatatatctgtatatcatgagcatggccatttgttctctcaaatatatttatcacatctccattttttcagacacccggtatatccaatgagccaccatttttgagcttcagtgttgataacatcgacacagtaaagttattggaactcctagggcccgaaaaagttgattcagctgatgtcaaggctattaaggaaaaacttttcggctacacaacattctggttgacaagagaagaaccttttggtgatcttggggaaggggtcctttttattgggaacctccgagggaagagagaagaaatatttgcaaaacttcaacagcagttacgtgaactcacaggtgacaaatacaatctttttatggtggaggagcccaattcagaaggggaagacccacgtggaggaccacgtgttagttttggtttgctcagaagagaagtttcagaacctggacctactacattgtggcaatatgtcatttcactgttacttttccttctaactgtgttctcttgtgttgagctaggaattgcatcaaaggtatacctactctttgtttgttatatgcttgccacatcttaataccaacatatcattatatgccaagtctctaataaatggtatgtgtcgtgcagattagcagtcttccaccagagattgttacatatttcactgatccaaatgctactggacccccacctgatatgcaactcttacttccatttgtggaatcagctttgccggtggcttatggtgtcttggctatccaactatttcatgtaattcactccctcagtctgttgagcaactatgtatctatcttctagtcttttaactcctaaagaagccatttgaacaacaacacaccttttagactagtttaatatttcagatatattgtgaaactggcacgatagcttctcctgccatgttccaatttgattaataaactgatcagaattacactgatttctaatatttgtttagcatggggctaggggttaaacacatctttcttcctgagttggattggttcggatgtgctattcaactagagttgcactgtattcaaatatggaaacattgttgcatagagctttgtataataatcaaaactggataattactgtgcaatttaatcatataccttgattagtttgaacaaaactttccaatcaacaagcatgatggtaacaattgaatgttggtccgaacataggtagatggtggtaccagagggtccattgtttccatgttagtttatatctgtttgaattgctgtttgtgaattgttctttttttttagttgacaaaacctaccatgttgcattctgtatgcaggaagttggtcactttttggcagcatttccaaagaaggttaaactaagcattcctttcttcattccgaacttcactctaggaacttttggcgcaattactcaggttagtaataagtaaaagaattagttttgactgctgatgaaaatctgggatgacattgtgctgtaattgcattattgcatattgattgttgatcatgagcaagctacacagcttgataaatgataatatattggacttcgcatgtactttgatttaccacctataaacatgataccaaggaaagcatatgcctccttttcaaaaacatccctgcttatatttctatttcactagataatatcaagctcactaaagtcatgccatagcagtgatactgttttttcggccacttctagctctagtacgacagagtgatgctaaagaaggcactagagtctaaatgtcactgcaacaattgatttttttgggtcctctgttgcatttctgttcgtatttctgtttttatgcactaaattgtagaagtctagtatgagcggcgtgtggttctttttaactactagatatgagctcctcttattgttgtcatccatcctgtagttcaaatccattctgccggataagaagacaatgtttgacatatcaatggctggtcctcttgctggagctgcactttctttctcaatgttctctgtaggcttgttgctctcctcaaatcctgctggggcaagtgatttagttgaagtacctagcaagctattccagggttccttgttgctcggacttgttagcagagcaacacttggctacaggtctctgatacttgatatttttatcatttaactatattttaatttcgtcatgccttagttccattgtgatacctgcaccttttcgttcagtctcttgtgctatataagacctatagataccatttcaggactctttttttttgttattttcatattctccacaatctgttttgatcttacaaatacaaaccagattaagtcaaaacttcactgctaattttgagagaattttttcactggatcagctcatgtgaaatatactttcccagacctccaaattctatagacagatacacatgataggatattttatgaacatcgccatttatgaacatcattgtgatattagttgaagtattctactttatttattcagttatatgtctcaaaagttttagtccgcaactcttatccttctaatggacataaattgatctacagagctatgcatgctgctacagttgctatccaccctcttgtgattgcaggctggtaaagtaccctgcactaagtccttgacgttgtaaccaagcaaatagcaattataatcttatcttgtttcctgcaaattctgtaggtgtggtttaacgactactgcctttaatatgcttcctgttggatgtcttgatggtggaagagctttacaggtaaaattactgtagttgtttttattaatatcatcactgttccttaattcctttctaaaatactgtcaataagttattgactagcttgaggttccagtgcatttttttatcaggcctccaggtttcaacctaaattaacttagcaatagataatcattaatctctgtagaacttctgatgcttaacctatggcttggaaaggacatgatagtttatctgcaaagattctagcttctgtaagaaacaagcatgcctaaagttcagtgatatttgcaacagggtgctttcggcaaggatgcgttgtttggatttggcttgacaacatactcattgcttggactcggggtggtaagccagtctatcttgcagtttgatatttggctgtagagtttctgtcacagtacagacctctatgacaaaacatttcatccatatgtaaagctcatacaagtatttgtggtttattgcaactaaacaccaaatgttctatgtgtatcagttatgatttgtacagttctgtgaaaacttgacatgtcgaagagaaatttacaatgccaagtagactacgaatgtctggattcatttttagttatgcgtgtcttgtttaaaccttttagttcatatgaattcaatccatggtgcaagatgatactttttcctgttgcacttataacgaaaagcaagatgatcaaacatttgaagaaccaatcggacttggtactaggttgttttcacttttgactttttgagatctgacctaagctgcatgcgtgcaattttcttgatattttaatttttgccctcaccttgaacattatgtactgctactatgtattgtattcagttctaatgcctcttctttttcccagcttggggggccactatctcttccttggggcttatacgtgctaatatgtcaggtaaagcatgctgatgattcggagatacattgtgagaatcaatgttttacgctcagacttatttatgtcttttggttatttttgctcagagaacacctgaaaagccctgcttgaatgatgtgagcgatgtcggaacgtggaggagagcagcattgatagtttcagtgtttcttgttgtattgactctcattccactctgggatgaacttgcagaggacctaggtgtaggacttgtgacttctttctgagatgaacttaccggtagagttaggccatgatgcaagtcaattttgtatgcgcttgtagtatccatagtgaaattgttgtaaaggcgtgcgaaattccgcttctaagtgaaatgttgacctactgagatgagccatttccttcctatggccagagcagttgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0792400, RefSeq:Os03g0792400