Os03g0793600

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Revision as of 13:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0793600| Description = Endonuclease/exonuclease/phosphatase domain containing protein| Version = NM_001058067.2 GI:297601807 GeneID:4334397|...")
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Gene Name

Os03g0793600

Description

Endonuclease/exonuclease/phosphatase domain containing protein

Version

NM_001058067.2 GI:297601807 GeneID:4334397

Length

5900 bp

Definition

Oryza sativa Japonica Group Os03g0793600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33861650..33867549

Sequence Coding Region

33861650..33861679,33861791..33861878,33862493..33862570,33862787..33862874,33863027..33863131
,33863226..33863726,33863858..33863993,33864132..33864325,33864415..33864523
,33864636..33864774,33864931..33865081,33867061..33867101,33867190..33867257
,33867481..33867549

Expression

GEO Profiles:Os03g0793600

Genome Context

<gbrowseImage1> name=NC_008396:33861650..33867549 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33861650..33867549 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggaagagagcaacaagaagagcaagctctcatggtccaaatcccttgtgaggaagtggttcaacatcaagagcaaggcaaacgatttccatgcggactatgatgctagccaaggaagaaatggtcatggaggtgaatggaggaccagctgctcagagagggaggcaggcacagccaagaaaagcagaactgaccggatgccaaagaagaatgccgactgcattcgtcgaggaaggactgaatctgatgtgtcacgcctgactgaagttcaagattacagaatatttgcttcaacatggaatgtgggtggtaaatccccatcaaagggattagatttagatgagtggctccactcttcacctcctgctgatatctatattctaggatttcaagaaattgttcctttgaatgctggaaatgttcttggtactgaagataatgttccagcaaaaaagtgggtatccctcattaggaggacactgaacaggaatcctggggctagcagctatggtggctatcacacaccatctcctgtccctgatccagttgttgaactagatgctgattttgagggatcatcgagaagacatgataacttgtcatttttccatcggcgatcattccagaaccttagtcagagtttaagagtcgaaggaaattatatgtcatcacagccaaggttggaccgtaggttcagcgtttgtgacccagttagcttgggcggcagaccaagtgattttgatggaaatttcccatgtgcgggatcaccagatgatgaatatattgaggaggatggaagcaatggaacttatttttcaccgtttccatatggctacggtacctcaatagctatggaggaaaacgatgagcaaccaaatacctctaggtactgtttggttgccagcaagcagatggttggtatatttctcacagtttgggtgcgcagcgaattaagaaatgatgtgaaaaatcttaaagtctcttgtgttggtagaggtctaatggggtatcttggaaataagggttcgatatcaataagcatgtctttgcatcacacatccttttgttttatctgttgtcatttgacatctggagaaaaggagggggatgaattgcgcagaaattctgatgttatggaaatcttaagaaagactagatttcctcgggttcgtggtgctggtgacattaagtcaccagaaaccattcttgagcatgatcgtatcatatggcttggggatttgaattaccggatttccctttcatactgctcggcaaaagcactcgttgaaatgcataactggaagcaactgttggagaaagatcaaaacgaagatgcggacgcgttttccaggggtggaaagaaggacggatttattttcctccaacatacaaatattcattcaactcagatcgctattctggggagtgtgtgcattcaaaggaaaagcgaagaacaccagcttgagtcgcgcttctccgaccatagaccggtgtacagcattttcatggcggaggttgaaattatccgccagaggagaagaaatatgggctgtttcaactctagagttgaggtggaagagcttctgccatattcttacagctttggagacatcaatagtaccgagaccgtttgtggaggattcatcaacgctcaagttcagaaacaagtactgccagctttgacagactgtgatgctgtgacatcaactagaaaaagattgcagtcttctgtgtgcacaagactgcacaactctgcaagtgatggatacctgagctttaagcaaagaaactga</cdnaseq>

Protein Sequence

<aaseq>MREESNKKSKLSWSKSLVRKWFNIKSKANDFHADYDASQGRNGH GGEWRTSCSEREAGTAKKSRTDRMPKKNADCIRRGRTESDVSRLTEVQDYRIFASTWN VGGKSPSKGLDLDEWLHSSPPADIYILGFQEIVPLNAGNVLGTEDNVPAKKWVSLIRR TLNRNPGASSYGGYHTPSPVPDPVVELDADFEGSSRRHDNLSFFHRRSFQNLSQSLRV EGNYMSSQPRLDRRFSVCDPVSLGGRPSDFDGNFPCAGSPDDEYIEEDGSNGTYFSPF PYGYGTSIAMEENDEQPNTSRYCLVASKQMVGIFLTVWVRSELRNDVKNLKVSCVGRG LMGYLGNKGSISISMSLHHTSFCFICCHLTSGEKEGDELRRNSDVMEILRKTRFPRVR GAGDIKSPETILEHDRIIWLGDLNYRISLSYCSAKALVEMHNWKQLLEKDQNEDADAF SRGGKKDGFIFLQHTNIHSTQIAILGSVCIQRKSEEHQLESRFSDHRPVYSIFMAEVE IIRQRRRNMGCFNSRVEVEELLPYSYSFGDINSTETVCGGFINAQVQKQVLPALTDCD AVTSTRKRLQSSVCTRLHNSASDGYLSFKQRN</aaseq>

Gene Sequence

<dnaseqindica>1..30#142..229#844..921#1138..1225#1378..1482#1577..2077#2209..2344#2483..2676#2766..2874#2987..3125#3282..3432#5412..5452#5541..5608#5832..5900#atgagggaagagagcaacaagaagagcaaggtatgtgagcttcctttgtggtggtgtttcagatcaatctgggcatcttgttgtttctctgctgtgtttttgatcgagtagggctttttttgttggcttcttgatgtgtagctctcatggtccaaatcccttgtgaggaagtggttcaacatcaagagcaaggcaaacgatttccatgcggactatgatgctagccaaggtaatgcgagcgtttcattttgatttatgagatgagaacttgtgttcttccttggatcataaccaaactgttgattccagttcatagttgtagctaatttggatcataaccaaattcccaaaccaacaacctgttcttctgtttttgttgtttagttggttgtgcatactagttcttgtggtgtgtgaaggttggttgaatgcagattttatcatcttgtgcttgtagttcctcgattccatcagacatttccagtccaagttcctagtctcgattcaacgatgcagtagcaccagacatgccccaatcaaacgcctttaatttcctagacacgaccacatttaagtctcggctcctggtttcggtttagtggtacacaagtcattagaatgtcccaatcaaaaaccttttcctaagtgattctgatatttgtccggtgctgcttggagtttttgtatgtttctaacactaagtcataagtcatttttgccggtctaaaagcttgtacttttgatttcaagatcgagagatgatgaaacggtctcagacaatgaccattttattttcattttgctgtcttgctcagtttgggctgaatttgcttggtgatccaggaagaaatggtcatggaggtgaatggaggaccagctgctcagagagggaggcaggcacagccaagaaaagcagaactggtacagttaaagcatttggaccacacttctttctctctcttcagacatcaaagatcgcagctacctccttttcttttccccacgactctaatttccctgttgagcgttcctgttttcgcctaaatgatttgaatgattatctaaaatccgaatactgttcattctgttccttaccgatttatctgaatgtctgttttttacttatgggcatgatagaccggatgccaaagaagaatgccgactgcattcgtcgaggaaggactgaatctgatgtgtcacgcctgactgaagttcaagattacaggtacccaaatacccatatatttctttgccttgtaagcttgttgtcaggggaaaaaggtttaggcatataatgcactgcagttcttggtttttgcacgttgactttggtaggataattgatgttgttgcttattcgctcccttttgtgtgcagaatatttgcttcaacatggaatgtgggtggtaaatccccatcaaagggattagatttagatgagtggctccactcttcacctcctgctgatatctatattctagggtatgtactgcccgaggccttgtcattttgaactacattatgtagtacataccagtggacttgagctattgtcttcaattcatgctgtatgcagatttcaagaaattgttcctttgaatgctggaaatgttcttggtactgaagataatgttccagcaaaaaagtgggtatccctcattaggaggacactgaacaggaatcctggggctagcagctatggtggctatcacacaccatctcctgtccctgatccagttgttgaactagatgctgattttgagggatcatcgagaagacatgataacttgtcatttttccatcggcgatcattccagaaccttagtcagagtttaagagtcgaaggaaattatatgtcatcacagccaaggttggaccgtaggttcagcgtttgtgacccagttagcttgggcggcagaccaagtgattttgatggaaatttcccatgtgcgggatcaccagatgatgaatatattgaggaggatggaagcaatggaacttatttttcaccgtttccatatggctacggtacctcaatagctatggaggaaaacgatgagcaaccaaatacctctaggtattgttttggtgaaaatccattttgtgaatctattctagtcttataaattttcagctaaaaaaaatgctaagttgactatgatccttctatattgaagctataacttctgaaaatgttgtgtctaccaggtactgtttggttgccagcaagcagatggttggtatatttctcacagtttgggtgcgcagcgaattaagaaatgatgtgaaaaatcttaaagtctcttgtgttggtagaggtctaatggggtatcttggaaataaggtaaactttatgagttcacagttctttgaaatgttttcttttaatcatcttgcgtgtagaaagtgaaaatattgcagatagattgttgttcactgttactgtaacatgttacttaaaggtcctttccttttgttgcagggttcgatatcaataagcatgtctttgcatcacacatccttttgttttatctgttgtcatttgacatctggagaaaaggagggggatgaattgcgcagaaattctgatgttatggaaatcttaagaaagactagatttcctcgggttcgtggtgctggtgacattaagtcaccagaaaccattcttgagcatgagtatgaatttatgttccctactctacattgcaatgtggaagcaacacaacacttggctttaattttacattcctttgattcaattgcagtcgtatcatatggcttggggatttgaattaccggatttccctttcatactgctcggcaaaagcactcgttgaaatgcataactggaagcaactgttggagaaagatcaagtaattgacactgttttgttaatacttaaattacaacatgacatgcatcgcacatccattatttttttcaggaccatgtttaagtttcttgttttgtaacagctacgaatagaacgaagatgcggacgcgttttccaggggtggaaagaaggacggatttattttcctccaacatacaaatattcattcaactcagatcgctattctggggagtgtgtgcattcaaaggaaaagcgaagaacaccagcttggtaacttctttagcacttgtatcaaccagaattttctcctgctttgatttttttttcaaagcaacgtactgaaaaacctgttctttattgaccataggtgcgatcgtattctatggcatggtaatggactcattcagttatcttatgttcgtggagagtcgcgcttctccgaccatagaccggtgtacagcattttcatggcggaggttgaaattatccgccagaggagaagaaatatgggctgtttcaactctagagttgaggtggaagagcttctgccatattcttacagctttggagacatcaagttcaactaagtcagctcattatatgttatgctcaagttttctgctttgtgtttatgtaagcaaactgatttttttttcagtaagaactacacatctttgcatgtatatcttatgttttacatacctctactggttatgcaggttgacaaatgaagggttcaaattctagtaaatgatcagatgtgaatgtgccaatatttttccatctggttttttttttgttagccttcagatgcacacttcttgtttaattgactatcaccaagcctgaagcatgtgcagatgcttgtgaaaaacattatccaaaaaactaacataaaggtaattgatctcttgtttgttgagcaaaactcaaaaattcttgcataagcctgactgtcactcttgttctgttgcagggcagttgggcaattttgcaactaaccaatttcctggaagtatcagcccacacaactaattatacagctcaaccagctctcatgttccagttcatttctacttttgttttaagactgataagtgccatcacttctctttttccctttgcattttgggaacttttgtaagctggccattgtatcagcatgaggtgtaaaatcattgcaaatcggcaaggggaatgaatgataacttggatcgaactaattccagataatgatttctagcgcaaggggagaatgataagttgatgtgacttgagagagttgcaaagttatgctaatcatgtgcatacctttctgatggtgtacttgtgaagctaaatgatgcttgcatttgctgccctcattgttgtggcatactactggagtattaaacaaaagcttaatcccattgttttacttggattacacagaggcatgtttcctttctggaatacatggtgagacacagtgtcagcttgcatgtaccctgcattggttgctgtcattgtagtacaatgtacatggcatatatgaaaagcatccatttggcaagttggacactctggttactgttatttatcactgaaatctcctctctggttactgtttattactgaaaatcttcagttgtgacttgttgagagaacaagcttttgacctcctttttggtccttgcctctctgtctgcagggagtagtaaatcacgtgatgtgatttgatctaccaacgtacaatgcacttagttgacatgatagagaattaatattgggtgtttaattctcactgtttgctgcttgaccggtgttgtttctccctttccaggtgaaaacttattagtactagtagtaagggtgtgtttagtttatgaaaaaagttgaaagtttgaagaaagttgagagtttgaaaaaaaagttgaaagtttatgtgagtagaaaagtttttgatgtgatacgatgtgatggaaacttgggaataaggaggaaactaaacacggcctaacaaacactagtaatggtttatcttagtctgtgtttagatccaaactttcaactttttccatcatatcaacctgtcatacacacacaacttttcaatcacatcgtaccaattttaacccaaacttccaactttagaaggaactaaacacagccctaattacagactgaaaatatgttcaaccaacagattaggataaaccaaatatggtcaagcaacttcagaagtcatttcatctatttctgttaacagaaatgacttctgaagttctgatccagatttggcatgcactgctaaaccaaattgcctaattgaggattactactgaggatggtaaaaaaaatgctactagttccaatgggaaggaaggtagaaaagcaaaagcaagtggagatgctagtaaatgagaaggaaaaaaaaagataaagcaggtaaaaggaaaagaaactgttgcatccaaaggacaagcaatgcatcttgctttgatcctatcctgttccttcctttttactgtgaacagtattgttaactgaatcctattcgtttttctgctgttgtagtagtaccgagaccgtttgtggaggattcatcaacgctcaaggtgatcagtcataatcacctgtgatagtgatgcagttttctgaatattcagatcttaaagcaatgacactgtttttgggtgtgtttagttcagaaacaagtactgccagctttgacagactgtgatgctgtgacatcaactagaaaaagattgcaggtaagtgacgccacggcgcgacgcactcaaacaaatgcatctggcgaaaaacacaagtaccagtagtacgatacgagtacgaatcttgaggcaacgaccttggtgcccgggctctctcgccgtagtgaagcagaggctgggcaagcagcagcgtttcagtttcagagtttcagcccatgtgtttgcccttcttcatgcattgcatttgcatccaactgtgcagtcttctgtgtgcacaagactgcacaactctgcaagtgatggatacctgagctttaagcaaagaaactga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0793600, RefSeq:Os03g0793600