Os03g0795300

From RiceWiki
Revision as of 13:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0795300| Description = Similar to Extensin protein-like| Version = NM_001058082.1 GI:115455892 GeneID:4334413| Length = 1675 bp| Definitio...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0795300

Description

Similar to Extensin protein-like

Version

NM_001058082.1 GI:115455892 GeneID:4334413

Length

1675 bp

Definition

Oryza sativa Japonica Group Os03g0795300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33934573..33936247

Sequence Coding Region

33934690..33935347,33935615..33936138

Expression

GEO Profiles:Os03g0795300

Genome Context

<gbrowseImage1> name=NC_008396:33934573..33936247 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33934573..33936247 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagaatgcgcgtctcggcggcggcggcggcggcgctgttcgtggcggtggtggtggcctcgccgctgctggcgtcatcgcagcagccggcgatggcgccggcggcggcggcggcgccgacgaacaactcgcggctggagaaggcgtacgtggcgctgcaggcgctgaagcgcgccatcaccgacgaccccaagaacctgacgcacagctggtgcgggccggaggtgtgcggctacttcggcgtgtactgcgcggcggcgcccgacgacccgtgcgcgcgcacggtggccggcgtggacctcaaccacggcgacctcgccggcaccctcccggaggagctcggcctcctcaccgacctcgccgtcttccacctcaactccaaccgcttctgcggctccctccccgactccctccgcaacctccaccgcctccacgagatcgacgtcagcaacaaccacctctccggctccttcccctcccaactcctctgcctccctgacctcaaatacgtcgacctcaggtttaacaacttgtgcggagaggtgccggcggcgatattcgagaagaagatagacgcgctgttcatcaacaacaacaacttcgacttcaagctgacggagagcttcagcaactcgacggcgtcggtgatcgtgctggcgaacctgccgaagctggggggctgcctgccgagcagcatcggcgacatggccgagacgctcaacgagctggtcctcctcaacagcggcatctcgtcgtgcatcccgccggagatcggcaagctggacaagctcaccgtgctcgacctcagcttcaacgacttcgccggcgcgctgccggagaccatcggccacatgcgggcgctggagcagctcaacgtcgcgcacaacggcctcgccggcgagatcccggactccatctgcgccctcccgcacctcaagaacttcacctactcccacaacttcttctgcggcgagccgcaccgctgcctcgaggtgccgcacgttgacgaccgccagaactgcatcgccggccgccccgaccagcgctccggcgaggagtgcatcgcgttcctgcaccgcccgccggtgcactgcgacgcgcacggctgcatcgcgccgctgtcgccgccgccgccgccgccgccggtgcactacgcgcctccgccgccggtatattga</cdnaseq>

Protein Sequence

<aaseq>MARMRVSAAAAAALFVAVVVASPLLASSQQPAMAPAAAAAPTNN SRLEKAYVALQALKRAITDDPKNLTHSWCGPEVCGYFGVYCAAAPDDPCARTVAGVDL NHGDLAGTLPEELGLLTDLAVFHLNSNRFCGSLPDSLRNLHRLHEIDVSNNHLSGSFP SQLLCLPDLKYVDLRFNNLCGEVPAAIFEKKIDALFINNNNFDFKLTESFSNSTASVI VLANLPKLGGCLPSSIGDMAETLNELVLLNSGISSCIPPEIGKLDKLTVLDLSFNDFA GALPETIGHMRALEQLNVAHNGLAGEIPDSICALPHLKNFTYSHNFFCGEPHRCLEVP HVDDRQNCIAGRPDQRSGEECIAFLHRPPVHCDAHGCIAPLSPPPPPPPVHYAPPPPV Y</aaseq>

Gene Sequence

<dnaseqindica>901..1558#110..633#gtactaaacactgattagtagcacaactactactcatagcaacatacgaggtgagctggtgaggtgtagctagcaaccaacctttgtactgccatacgcgtctcattgcatggcgagaatgcgcgtctcggcggcggcggcggcggcgctgttcgtggcggtggtggtggcctcgccgctgctggcgtcatcgcagcagccggcgatggcgccggcggcggcggcggcgccgacgaacaactcgcggctggagaaggcgtacgtggcgctgcaggcgctgaagcgcgccatcaccgacgaccccaagaacctgacgcacagctggtgcgggccggaggtgtgcggctacttcggcgtgtactgcgcggcggcgcccgacgacccgtgcgcgcgcacggtggccggcgtggacctcaaccacggcgacctcgccggcaccctcccggaggagctcggcctcctcaccgacctcgccgtcttccacctcaactccaaccgcttctgcggctccctccccgactccctccgcaacctccaccgcctccacgagatcgacgtcagcaacaaccacctctccggctccttcccctcccaactcctctgcctccctgacctcaaatacgtcgacctcaggtacatctacataaaaattttacgtttcttgagaaaatatttttgagatatctaaattttacattaaaatttttggtagcttaatacgcttagtactacccgaagatatcaaattttacacgtatttttttaaggatgataaaattatatatcctacatatattattcatttatatagttttatacgtacaaaattgcaaagagagagtagtatttgtacgtagtaaagtatgatgtaagtgtaattgtgtaatgtgtttggggaaggtttaacaacttgtgcggagaggtgccggcggcgatattcgagaagaagatagacgcgctgttcatcaacaacaacaacttcgacttcaagctgacggagagcttcagcaactcgacggcgtcggtgatcgtgctggcgaacctgccgaagctggggggctgcctgccgagcagcatcggcgacatggccgagacgctcaacgagctggtcctcctcaacagcggcatctcgtcgtgcatcccgccggagatcggcaagctggacaagctcaccgtgctcgacctcagcttcaacgacttcgccggcgcgctgccggagaccatcggccacatgcgggcgctggagcagctcaacgtcgcgcacaacggcctcgccggcgagatcccggactccatctgcgccctcccgcacctcaagaacttcacctactcccacaacttcttctgcggcgagccgcaccgctgcctcgaggtgccgcacgttgacgaccgccagaactgcatcgccggccgccccgaccagcgctccggcgaggagtgcatcgcgttcctgcaccgcccgccggtgcactgcgacgcgcacggctgcatcgcgccgctgtcgccgccgccgccgccgccgccggtgcactacgcgcctccgccgccggtatattgatctgcggtaaaactgtaattgctgtaactgttttctgcctttgagctgtgagaaagggtaaaaattcagcaagtgtatacataaggtatatacagtaaatctttatttttcagaaag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0795300, RefSeq:Os03g0795300