Os03g0796900

From RiceWiki
Revision as of 13:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0796900| Description = BZIP protein| Version = NM_001058093.1 GI:115455914 GeneID:4334424| Length = 4360 bp| Definition = Oryza sativa Jap...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0796900

Description

BZIP protein

Version

NM_001058093.1 GI:115455914 GeneID:4334424

Length

4360 bp

Definition

Oryza sativa Japonica Group Os03g0796900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34038124..34042483

Sequence Coding Region

34038385..34038747,34038951..34039076,34039165..34039240,34040044..34040239,34040775..34040868
,34041882..34042304

Expression

GEO Profiles:Os03g0796900

Genome Context

<gbrowseImage1> name=NC_008396:34038124..34042483 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34038124..34042483 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcgggtgttctccgtggaggagatctccgacccattctgggtcccgcctccgccgccgcagtcggcggcggcggcccagcagcagggcggcggcggcgtggcttcgggaggtggtggtggtgtagcggggggcggcggcggcgggaacgcgatgaaccggtgcccgtcggagtggtacttccagaagtttctggaggaggcggtgctcgatagccccgtcccgaaccctagcccgagggccgaagcgggagggatcaggggcgcaggaggggtggtgccggtcgatgttaagcagccgcagctctcggcggcggcggcggcggcggcgacgacgagcgcggtggtggaccccgtggagtacaacgcgatgctgaagcagaagctggagaaggacctcgccgcggtcgccatgtggagggcctctggcacagttccacctgagcgtcctggagctggttcatccttgctgaatgcagatgtttcacacataggcgctcctaattccatcggaggcaatgctactccagttcaaaacatgctaagtggcccaagtgggggatcgggctcacagttggtacagaatgttgatgtccttgtaaagcagcccaccagctcttcatcaagggagcagtcagatgatgatgacatggagggagaagctgagaccactggaactgcaagacctgctgatcaaagattacaacgaaggaagcaatccaatcgggagtcagccaggcgctcaagaagcagaaaggcagctcacttgaatgagctggaggcacaggtatcgcaattaagagtcgagaactcctcgctgttaaggcgtcttgctgatgttaaccagaagtacaatgatgctgctgttgacaatagagtgctaaaagcagatgttgagaccttgagagcaaaggtgaagatggcagaggactcggtgaagcgggtgacaggcatgaacgcgttgtttcccgccgcttctgatatgtcatccctcagcatgccattcaacagctccccatctgaagcaacgtcagacgctgctgttcccatccaagatgacccgaacaattacttcgctactaacaacgacatcggaggtaacaacaactacatgcccgacataccttcttcggctcaggaggacgaggacttcgtcaatggcgctctggctgccggcaagattggccggacagcctcgctgcagcgggtggcgagcctggagcatctccagaagaggatgtgcggtgggccggcttcgtctgggtcgacgtcctga</cdnaseq>

Protein Sequence

<aaseq>MERVFSVEEISDPFWVPPPPPQSAAAAQQQGGGGVASGGGGGVA GGGGGGNAMNRCPSEWYFQKFLEEAVLDSPVPNPSPRAEAGGIRGAGGVVPVDVKQPQ LSAAAAAAATTSAVVDPVEYNAMLKQKLEKDLAAVAMWRASGTVPPERPGAGSSLLNA DVSHIGAPNSIGGNATPVQNMLSGPSGGSGSQLVQNVDVLVKQPTSSSSREQSDDDDM EGEAETTGTARPADQRLQRRKQSNRESARRSRSRKAAHLNELEAQVSQLRVENSSLLR RLADVNQKYNDAAVDNRVLKADVETLRAKVKMAEDSVKRVTGMNALFPAASDMSSLSM PFNSSPSEATSDAAVPIQDDPNNYFATNNDIGGNNNYMPDIPSSAQEDEDFVNGALAA GKIGRTASLQRVASLEHLQKRMCGGPASSGSTS</aaseq>

Gene Sequence

<dnaseqindica>3737..4099#3408..3533#3244..3319#2245..2440#1616..1709#180..602#aatttacacccaaacacaaaaaattagcagcacgcagccgccttcccaatcctctcctcttctccaagcggcaattcgcgcgaggttttctccgatcaaaccctcgaatccccccctcgcgaatccatcggagggtagccccgcgatccgcgtcggcgagagcggattccgattccgcgatggagcgggtgttctccgtggaggagatctccgacccattctgggtcccgcctccgccgccgcagtcggcggcggcggcccagcagcagggcggcggcggcgtggcttcgggaggtggtggtggtgtagcggggggcggcggcggcgggaacgcgatgaaccggtgcccgtcggagtggtacttccagaagtttctggaggaggcggtgctcgatagccccgtcccgaaccctagcccgagggccgaagcgggagggatcaggggcgcaggaggggtggtgccggtcgatgttaagcagccgcagctctcggcggcggcggcggcggcggcgacgacgagcgcggtggtggaccccgtggagtacaacgcgatgctgaagcagaagctggagaaggacctcgccgcggtcgccatgtggagggtacagccattctcccccccccccctctagtactcgagagcttactgagatcggcaatgctagctactgtttgcatcgaatgtttataggtatttagatcgggcatttctatagaccaatggcgtccatggtcttgcaatgcgctctgttgagtgtcggtggttggttcgactcaaagtatgtagggttgtgtacaaacggaagcttcatagacctcggtattgagattgcgatatcgatgcaacctggcgaattggcaatgtaatcagtcatattcttactaaactgcgagacagtggtttgtttgcaattgcaatatttttgtatggggctgcttaaactgtacattgcctttttagattggcaatatgtgactttatgcaagtatttgattgggcggatccaggaacaaaaagttggggggattcaacataccgagtacactggcataaacacatcatctcagtattaaactatgctaaaatgctattaagagacctttagcacctcttatcttatcaaccatggtgaaaaaattgaaggggggactcaggggggtatccatgggtccgatgggtgcaggggggacttgagtcccccctgcacccacgttgaatccgccctggcatgcgtataagctgtcacagccatttctaggtgcttgtgcttagttgggtgatgtcagcttaatttgtcttttctatgtcgtcatcgattttctaagaaacgaaaaatagcctatttatgtgctccagaatttgatggtcactggccttcatttgctgaaattagcctatttgttggttgccttcagttttttcccagcttatgttgttgcaatgtgtggctatgcctcgttttgtgcctataatttattatttgcaattcaattttttgttacattggacttaaaatggacaactagagcaacatgcactgattggtttatcctataatcatttatgtagttctgttcattttatcatgctagctcatgtcattttcatcttcaggcctctggcacagttccacctgagcgtcctggagctggttcatccttgctgaatgcagatgtttcacacataggcgctcctaattccatcggaggtacttatcttatctggttacattttcagattgttatgaaactacccaaatatcctgcacaattgcatgggattaaattttagtttctttgaaatagaagtagagttgtattgctgtcacgtcatcaaatagttctgaagctatgaataaataagttccgcatttgttagtgattctttgaacgttagaattgttatgcttaagtggatagggttatgtttgtttggagttcccttaaatcatttcattgctgactgccagctggcaggagcatttgttgttgccttgaccatgaatggagaacttcctgttctgagtgctcacaagaaaacatattttgattaatgcaccttgaatccttaggatcttgcaaagatgggcacttagctttagaattgagtagtacttaaatagctgttgttatcatgatttgtcctgtagtgaaatgtcgacaaaacaggaatgctacttttgacttctgatatttcatgcctggcttatactatgctctgtttggaacatgggcacatatcaggcaatgctactccagttcaaaacatgctaagtggcccaagtgggggatcgggctcacagttggtacagaatgttgatgtccttgtaaagcagcccaccagctcttcatcaagggagcagtcagatgatgatgacatggagggagaagctgagaccactggaactgcaagacctgctgatcaaagattacaacgaaggtgatcattcattgcttgcttgtaatatagattctgtacataattaacctacctcgtcatgcatgcatgtgtcctattttcaccttagccctttcagttggatttccactttcatccggtagcctttcagtttcctattgcatcgcatatatgatcttttacctaccatattagttctctgtgtgccatactcagtgcttagtgtctcgagcaagagaggaatttgtatggccattacacgtagcactttgctctctacttgtttattgacataagcaatttgggatgaattaaatctgagttcacatcatattccttatgtcacaagtttctgaaaccgattgtatctagtatctggttgatgcacccccatcttggatttgcaaatcaaagttatactccctagagagctttacctttcataaagcaattaccccaataaaccacggatttgatagctatcgactatgattaccagaattcatttggcagctattttctcaatttaagtttggtattagtctcagttggctgtaaaataatgtcacggtagggtacatgtatgtgcagcatacaaggtatggtgagttatgatatggacagtgtgtacaccccacatttgctcactaaaatcaaaatattcaaacgtcacgtgatgatatggtggattgcattataccttgtattgtttattatgttacttgtgctagacaataatataggctgttcttttgggtgattttgtatgaagatgttgagcaagcacttctcgatataatgctagttttgttgacctgttccaggaagcaatccaatcgggagtcagccaggcgctcaagaagcagaaaggcagctcacttgaatgagctggaggcacaggtctgatagttcacatagttattttcgataagacataaaatcctaaattactggctactgacttcagttatggatttacttgttacaggtatcgcaattaagagtcgagaactcctcgctgttaaggcgtcttgctgatgttaaccagaagtacaatgatgctgctgttgacaatagagtgctaaaagcagatgttgagaccttgagagcaaaggtatgctatatatgccttttgcaatatgcatcccatggattggctactttggcttgtttcaaactttcaactgacttgtgtaccctgttattagaagaataatccacgctaccattatactctataaatcaccatttggacagtccaaacatgattattaaatcaggtcaatctgaacattgaaatgtatcaaaaattcgcaggtgaagatggcagaggactcggtgaagcgggtgacaggcatgaacgcgttgtttcccgccgcttctgatatgtcatccctcagcatgccattcaacagctccccatctgaagcaacgtcagacgctgctgttcccatccaagatgacccgaacaattacttcgctactaacaacgacatcggaggtaacaacaactacatgcccgacataccttcttcggctcaggaggacgaggacttcgtcaatggcgctctggctgccggcaagattggccggacagcctcgctgcagcgggtggcgagcctggagcatctccagaagaggatgtgcggtgggccggcttcgtctgggtcgacgtcctgagaccgaaacccagagctgcttcggttctgaaagacactgcgagcaggaaatgatgattggacaggcgtagacattgctaatgctgtgaggttgatgattgttggtcgtcgtcgtcgtcattgtgcattctttgtaagggacacctcttagtaccctcttcttctaagggacttagtaccccttgtggatctcatcgtcctaaatactatacacattagccaaatgttcattggtgtgatggcgtcgtccctaatttgaacg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0796900, RefSeq:Os03g0796900