Os03g0799100

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Revision as of 13:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0799100| Description = Similar to WAVE-DAMPENED2| Version = NM_001058109.1 GI:115455946 GeneID:4334440| Length = 4510 bp| Definition = Ory...")
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Gene Name

Os03g0799100

Description

Similar to WAVE-DAMPENED2

Version

NM_001058109.1 GI:115455946 GeneID:4334440

Length

4510 bp

Definition

Oryza sativa Japonica Group Os03g0799100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34161106..34165615

Sequence Coding Region

34161366..34161445,34162609..34163035,34163466..34163551,34163895..34163988,34164116..34164187
,34164599..34164709,34165082..34165291

Expression

GEO Profiles:Os03g0799100

Genome Context

<gbrowseImage1> name=NC_008396:34161106..34165615 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34161106..34165615 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgaatggcgagggtggcggcgacccggcggcgcggaggcggtgggatctgacgaacaagggtgccgagagcattccaatggtgaaagaggctgtggaaatgtccacagacgaagaatcagacggtgtcgttatatgtccaccagatggcaacaatgatgatcgagaggaagccattagtagtaataatcatgataattgccaggaaggcgaagtcacttgtgttaaagacccggttatagacagtgaaacccaggaagacaagtgtgtgaaccaagattcagttaagttgatagatcaagagaagtctggtccacccaaatcaccatctaaacctggcatttctgggtcagataggtccaaacgtactgttcctcaaccatttgccctttcttctcaaagaaaatctcatggaggaaatagtaaggcggctcatccatctggcaatggagaaaattctggtgataagagcaactcctctccagcaagtttgacaaagaagactgcaccgattactcccaagaagattgcacagcctgatcatatgcttcaccatcaagaggaggactcctgctctgtgacttcttcaaccacaacttcaacaagagctggcaaaaccaaggcaactgttggtgttgccccttcatttgtatgtgctgatcgtgctgacaagagaaaggagttctacacaaaattagaagagaaacacaaggccttggaagctgagaagaatgaggccgaggcccggaaaaaggaagagcaagaaacagccttaaaacaactaagaaagtccttagtcatcagggcaaagcccatgccaagcttctaccaagaaggacctcctccaaaggctgaacttaagaaggtccctccaactcgtgctaaatcaccaaagtttacaaggaggaggagctgcagtgatgcaccgccgacgccagaggcagcaaataccaccgcagcatctagtcgatcacatcgtcacagcattgcgaaccctaaagatgctaacagagtacaatgctcaccaaaaaatggcgtcgctgccaaaactagagctgtcaaacctgtgagctga</cdnaseq>

Protein Sequence

<aaseq>MAANGEGGGDPAARRRWDLTNKGAESIPMVKEAVEMSTDEESDG VVICPPDGNNDDREEAISSNNHDNCQEGEVTCVKDPVIDSETQEDKCVNQDSVKLIDQ EKSGPPKSPSKPGISGSDRSKRTVPQPFALSSQRKSHGGNSKAAHPSGNGENSGDKSN SSPASLTKKTAPITPKKIAQPDHMLHHQEEDSCSVTSSTTTSTRAGKTKATVGVAPSF VCADRADKRKEFYTKLEEKHKALEAEKNEAEARKKEEQETALKQLRKSLVIRAKPMPS FYQEGPPPKAELKKVPPTRAKSPKFTRRRSCSDAPPTPEAANTTAASSRSHRHSIANP KDANRVQCSPKNGVAAKTRAVKPVS</aaseq>

Gene Sequence

<dnaseqindica>261..340#1504..1930#2361..2446#2790..2883#3011..3082#3494..3604#3977..4186#gagggagccacgcacattttcacacttcactctctctctctctctctctctcgtgcgccgcgccgcgccgcgcggcgagggtggtggtgggtgagcggcgagccgagccgggccacgggcggcgccgcgggaggcgtcccggcgagcggaggggaggggggcatccgagcgctgggggaggtagctcagcgggaacgggaacggggcgatcccccccggcgttctcctccccggtctctcctgtagctagctagctagccatggcggcgaatggcgagggtggcggcgacccggcggcgcggaggcggtgggatctgacgaacaagggtgccgagagcatgtaatggcagtggcaccagctgcatttcggtttgtttgtttattatttttttttttttttgggggggggggggggtttggctcgtggtgtggcgatgttcatggagcaatgttggtggcggagttcatcttccagctgggctgctggatctgctcgatttgtgcttggtttatgcgagtttttggtgatttcagatgggttttttccccttggtctacacggggcagctagggtttcgttacctggagaagatagattggccttagatactgttgttgttgttgttgttgctggtataaatctcaatacggtagggtgggagacggatttctgtaagaaatgagcttttccggaggcaaacgaaagagggatttcaatattaactagtggaataaaaaaaaattccctgttggggaggaaggatggggtagatttataggcatatcatgcattattgtcaaggtcattgcagtgaatttatgtgtgaactcgtattttaatgactcaacctttcttcttcttgagcatgctgaaccattcaaggattactgtgagaaatttctgatggatatgactttgaactttcctgcccaatttcatatgtactgtgtcacatccctgatacatttttaattgcagctgctgattctaagattttgagacattgcctgactcttagtgggcttgctgttaggattgtgctggttgactttgtgtggagatatcttatgatctgctgatgcacaattgtgatatggccattttttatgcaaagctttcgacttttgtttagattctttgttatccgtattagctatacttttatttttccagggtaatttagttttaagtgttcaaatcggaagcactgaggctgagagaaatgctgactagtttatgtacttacatacctaaaaagccttctgtgtatgtgcaatattagataatctgtgtgggcatcaacttttgtactatttaggttacaagccttatttttgcaggaatgcactaaatgctcctgttctgtagttattgtttctgcatgacctgagtactttagtgtttctatatattgtgtagttgcttgcatgctatttgtggtgaataacttatgaggttgtacttttgttataattgtggttaatgtactttaatccttgcagtccaatggtgaaagaggctgtggaaatgtccacagacgaagaatcagacggtgtcgttatatgtccaccagatggcaacaatgatgatcgagaggaagccattagtagtaataatcatgataattgccaggaaggcgaagtcacttgtgttaaagacccggttatagacagtgaaacccaggaagacaagtgtgtgaaccaagattcagttaagttgatagatcaagagaagtctggtccacccaaatcaccatctaaacctggcatttctgggtcagataggtccaaacgtactgttcctcaaccatttgccctttcttctcaaagaaaatctcatggaggaaatagtaaggcggctcatccatctggcaatggagaaaattctggtgataagagcaactcctctccagcaagtttgacaaagaaggtatgactattgtcatatatacagtattatccatatatcatgatgctaccaatatcatttgactcttgttctggtttttattattgcttaccattttatgtttctttttattttttgtattctcaccctaaatcatatcatgtatcttagtactgcctaggttgtctcactgagtatatcatgttcaaggctctaagctgcctttagatatcaaatttattagattgatgagccccattatatgttgaaggtttgttttgcaagtaaacatcgtaagcttgttctgtgaagtgtgcctaaacctatttggtggcatacctgtcttcttagtaccagactaccagttgatgtatctatttgcctgaaaatgttatgttgtaagcctaccagagatagctggttctgttgacacaactgataattattgcagactgcaccgattactcccaagaagattgcacagcctgatcatatgcttcaccatcaagaggaggactcctgctctgtgacttcttcgtatccttcttctatctaataaaaatacaccgtgtttctattttttttgggttgtactgtgatgatgttttctgcctttatttcttgtgaagatgtttctaaaatattgcatgagaaaattcatttcacataatgatcagatatttggttttcaattctagagtgatgactggaaaaaaaatcgatgttaaaaatgattagttctgttaaccttaattggttttcagttgatttgatattattctttgtagtgaaaacattgccaaggtgatgttctttctactcattgtttgaaactattgtatacaatttggcccctttttttttcctgagctgtgtaaagaaccacaacttcaacaagagctggcaaaaccaaggcaactgttggtgttgccccttcatttgtatgtgctgatcgtgctgacaagagaaaggaggtgaatatgtagtttgattgcattatttcaagatggcctcttaaatgtgtttgttatttacaaatagcgatggcattttcttttctctaaaaatagctggtgctcatagtgattgctgtttcttcagttctacacaaaattagaagagaaacacaaggccttggaagctgagaagaatgaggccgaggcccggaaaaaggtatgaatttccttgtgggggagaattgaattgtaggatacttaagttttgtttggtctgtgctattttactgggtctgttaaacatggttttaattcggtaatagctaaatttactctacgcttctgtgattctccttaattaatgcttatgaaatatttgtctcaacattcttcgcccagattcagccattatctctttttttttcatataatatattttggttcttagatatatcatggagagaggagtaatacaacgcctaagatttatgtgctaggcagaacatttgaatatgatactttttgttgcccaaatctttctataagatgttcatgttgatggacaactcctggcaactatttatttaccaatttacctcaacattcatgttcatttttttttgtgtaggaagagcaagaaacagccttaaaacaactaagaaagtccttagtcatcagggcaaagcccatgccaagcttctaccaagaaggacctcctccaaaggctgaacttaagaaggtagttctgaatttctgatgttttgtgtttcttttggaaacatgtacttgtgattgtcagtcttggcaatgtggagatatattgctaacttctaggaggagattgttggttcactggaatgagaggagtccttaatttacttattttcactgaacaacatatttgccattttgcccaaaatgccaaaactagttagatgtacagtgataacacaagaaagctacatttgagaaagcttttccttctttacaaggaatatatacaaatctatattatttcttgcatcatgtatcttaagcacagttttaatttccataattgatgattctactggtgggcaatatgacattcacttgtctttgttctttgaaggtccctccaactcgtgctaaatcaccaaagtttacaaggaggaggagctgcagtgatgcaccgccgacgccagaggcagcaaataccaccgcagcatctagtcgatcacatcgtcacagcattgcgaaccctaaagatgctaacagagtacaatgctcaccaaaaaatggcgtcgctgccaaaactagagctgtcaaacctgtgagctgaaggccctctggagattctagatcagccaagtgttgcgaatgtcgctgtacaaacctaactttagccgtctctcggtttcatggcattttgcatttgatttatacttcctgtcaccaaaagaaggccacagtgccgaggccggtgtgcttgcagctgaaccctttcatttcttttcttcttttcgcgttgctgtgtaagaactctgttgctgggaccatgtactgtgttccttgttgtaaatggtcgagggtttctgtcagaactcagaaggaagacactctgcccttttaaagcccttgatgaaccgttgcaatgttttgcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0799100, RefSeq:Os03g0799100