Os10g0363500

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Revision as of 08:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0363500| Description = Pentatricopeptide repeat containing protein| Version = NM_001070975.2 GI:297610359 GeneID:4348451| Length = 1539 bp|...")
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Gene Name

Os10g0363500

Description

Pentatricopeptide repeat containing protein

Version

NM_001070975.2 GI:297610359 GeneID:4348451

Length

1539 bp

Definition

Oryza sativa Japonica Group Os10g0363500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:11546282..11547820

Sequence Coding Region

11546282..11547820

Expression

GEO Profiles:Os10g0363500

Genome Context

<gbrowseImage1> name=NC_008403:11546282..11547820 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:11546282..11547820 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgccgccgccgcgcgcgctgccgctgccgcacttcaccctcccgccgctcgccggcgaggacctcctcttcgtgaccgccctccgcgcccacctctccaccgcgccgccgccgccgacgacgaccgccgcctccctctcccgcttcctcccccacctcaccccgctccgcctctcccacctcatcctcgcgcccccgcccccgccccgccacgacgacagcggccacctcctcctcgcctccctcctcccgtcgccgccgccgccgctccccttcgcgctcctcctccactccctccgcccgcgccgctcctccgccctcctcgcctccctgctcccttccatcccgcaccacgccttcccggacctcctccaccacgtcctcctcaccgcccgcctcaccgccgcccgccccgatggcggcgccgtcccggctctcgacgtgctcttctccgtctgcgcgcgggggaagaagctctccctggccacgctcgcgttccgcgccatgcgcgcccacggcctgctcccccgcgtcgtgtcctgcaacgtcttcatctccgccgcgctcggcctcaggcgccccgagatcgccctgtcattcttccgggagatgcggcggtgtaggatctcgccgaacatctacacggcgaacatggtgctgcgggcgttctgcgatcttgggcggaccgcggatgcggccgaggtgctcgacaaaatgccggagtggggcgttggaaggacaacggtcagtttcaacacgctgatcgcggcttactgcagggatggtgttgacgcagggcctgcgctgcagctgaagatgaagatggagcaggaggggttggtgcctgacgtggtgacgtacgacacgatcatccatgggctgtgcaaggaggggaggatgggaaaggcgaaccaggtgctgagcgagatgagggtgaagggggttatgcccaacacggtcacgtataacacgctgattcatgggtacgtggcgcttggtgataatgccatggcgggtagggttcatgaggagatggtgaagaaccgagtggagcttgatatcgtgacatacaatgcgctcattcttgggctttgcaatgaagggaagatgaagaaggtagagcacttgcttcgggagcttgacagggctaagcttgaaccgaatgcatcaaccttttcagcgctgattgttgggtggtgcaagatgcagaactcagagagagcactacagctgttgaatgtgatgaagaaaagtggcttccatccaaattacaccacttataagatggttatatcttctttctgcaagaacaaggatttagaaggagcagttgatgtgatgggggatatgttggggaggtgcattgctcctgacaaggccttgttgaatgaattttttgatggtctctggaaggctaaaaaattacatctggcagagaacctccgatcactgaataatggtttgaagttcattcctgatgtctactatactggtgattacaggaataaggatgaagtgataaacagatgctaa</cdnaseq>

Protein Sequence

<aaseq>MPPPPPRALPLPHFTLPPLAGEDLLFVTALRAHLSTAPPPPTTT AASLSRFLPHLTPLRLSHLILAPPPPPRHDDSGHLLLASLLPSPPPPLPFALLLHSLR PRRSSALLASLLPSIPHHAFPDLLHHVLLTARLTAARPDGGAVPALDVLFSVCARGKK LSLATLAFRAMRAHGLLPRVVSCNVFISAALGLRRPEIALSFFREMRRCRISPNIYTA NMVLRAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIAAYCRDGVDAGPALQLKMK MEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVAL GDNAMAGRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNAS TFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDVMG DMLGRCIAPDKALLNEFFDGLWKAKKLHLAENLRSLNNGLKFIPDVYYTGDYRNKDEV INRC</aaseq>

Gene Sequence

<dnaseqindica>1..1539#atgccgccgccgccgccgcgcgcgctgccgctgccgcacttcaccctcccgccgctcgccggcgaggacctcctcttcgtgaccgccctccgcgcccacctctccaccgcgccgccgccgccgacgacgaccgccgcctccctctcccgcttcctcccccacctcaccccgctccgcctctcccacctcatcctcgcgcccccgcccccgccccgccacgacgacagcggccacctcctcctcgcctccctcctcccgtcgccgccgccgccgctccccttcgcgctcctcctccactccctccgcccgcgccgctcctccgccctcctcgcctccctgctcccttccatcccgcaccacgccttcccggacctcctccaccacgtcctcctcaccgcccgcctcaccgccgcccgccccgatggcggcgccgtcccggctctcgacgtgctcttctccgtctgcgcgcgggggaagaagctctccctggccacgctcgcgttccgcgccatgcgcgcccacggcctgctcccccgcgtcgtgtcctgcaacgtcttcatctccgccgcgctcggcctcaggcgccccgagatcgccctgtcattcttccgggagatgcggcggtgtaggatctcgccgaacatctacacggcgaacatggtgctgcgggcgttctgcgatcttgggcggaccgcggatgcggccgaggtgctcgacaaaatgccggagtggggcgttggaaggacaacggtcagtttcaacacgctgatcgcggcttactgcagggatggtgttgacgcagggcctgcgctgcagctgaagatgaagatggagcaggaggggttggtgcctgacgtggtgacgtacgacacgatcatccatgggctgtgcaaggaggggaggatgggaaaggcgaaccaggtgctgagcgagatgagggtgaagggggttatgcccaacacggtcacgtataacacgctgattcatgggtacgtggcgcttggtgataatgccatggcgggtagggttcatgaggagatggtgaagaaccgagtggagcttgatatcgtgacatacaatgcgctcattcttgggctttgcaatgaagggaagatgaagaaggtagagcacttgcttcgggagcttgacagggctaagcttgaaccgaatgcatcaaccttttcagcgctgattgttgggtggtgcaagatgcagaactcagagagagcactacagctgttgaatgtgatgaagaaaagtggcttccatccaaattacaccacttataagatggttatatcttctttctgcaagaacaaggatttagaaggagcagttgatgtgatgggggatatgttggggaggtgcattgctcctgacaaggccttgttgaatgaattttttgatggtctctggaaggctaaaaaattacatctggcagagaacctccgatcactgaataatggtttgaagttcattcctgatgtctactatactggtgattacaggaataaggatgaagtgataaacagatgctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0363500, RefSeq:Os10g0363500