Os03g0800500

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Revision as of 13:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0800500| Description = Putative small multi-drug export family protein| Version = NM_001058120.1 GI:115455968 GeneID:4334451| Length = 2897...")
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Gene Name

Os03g0800500

Description

Putative small multi-drug export family protein

Version

NM_001058120.1 GI:115455968 GeneID:4334451

Length

2897 bp

Definition

Oryza sativa Japonica Group Os03g0800500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34238799..34241695

Sequence Coding Region

34238924..34239335,34241095..34241651

Expression

GEO Profiles:Os03g0800500

Genome Context

<gbrowseImage1> name=NC_008396:34238799..34241695 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34238799..34241695 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggcggcggcgtcggttctcgccgcctcgtcctcctcctcccctcctccgctcgcgctcgcgtcgtggagatggaggcctccgccgccgccgcctcttctggcagttgcaggtgcagctcgcggagcgacaaatcccaggctcgctctccgcctgagcgctgcggcgtctcctccggttaccggcgaatctcgcgccatcgcggggacggggcggtgtctggtggcgccgatgggtggggacgagacggagcgggatgcgacggctgcgacggcgccagactggggcgcgctcgcgaggcggctggctctgggcgcgctggggtgcgccgtgctctgctgcggcggtgcggcggtggcggcggaggactcgatcaaggcgtccggcttcgggctgcgtgtggcggcgtcgctgcggaggctcgggtgggcggacgaggccgtcgtgttcacgctcgctacgctaccggtgatcgagctgcgcggggccattccggttgggtactggatgcgcctcgaccccatccgcctcaccgtcctatccgttctcgggaacatggtgcctgtgccattcattatcctctacctgaaaaaacttgcagcatttctctctcaaagaagcgcatctgcaactcggattatggatcttctctttgagcgggcgcggcagaaggctgcacctgttgaggaatttcaatggcttggtttgatgctgtttgtggctgtaccatttcctggaactggagcatggactggggcaataatttcatcggttcttggcatgccattctggtcaggtttttcagcaaatttcgtgggcgttgtcttagcaggactgttggtaaatttgcttatgaatcttggtttgaagtatgccattatcactggtttagttctgttctttttatcaactgtcatgtggggtgtccttcgatccctcaaaaaatcactgaatgctaaatga</cdnaseq>

Protein Sequence

<aaseq>MAMAAASVLAASSSSSPPPLALASWRWRPPPPPPLLAVAGAARG ATNPRLALRLSAAASPPVTGESRAIAGTGRCLVAPMGGDETERDATAATAPDWGALAR RLALGALGCAVLCCGGAAVAAEDSIKASGFGLRVAASLRRLGWADEAVVFTLATLPVI ELRGAIPVGYWMRLDPIRLTVLSVLGNMVPVPFIILYLKKLAAFLSQRSASATRIMDL LFERARQKAAPVEEFQWLGLMLFVAVPFPGTGAWTGAIISSVLGMPFWSGFSANFVGV VLAGLLVNLLMNLGLKYAIITGLVLFFLSTVMWGVLRSLKKSLNAK</aaseq>

Gene Sequence

<dnaseqindica>2361..2772#45..601#aatccgatccgcgagaggcctcctcctcctcctcctcgatccagatggccatggcggcggcgtcggttctcgccgcctcgtcctcctcctcccctcctccgctcgcgctcgcgtcgtggagatggaggcctccgccgccgccgcctcttctggcagttgcaggtgcagctcgcggagcgacaaatcccaggctcgctctccgcctgagcgctgcggcgtctcctccggttaccggcgaatctcgcgccatcgcggggacggggcggtgtctggtggcgccgatgggtggggacgagacggagcgggatgcgacggctgcgacggcgccagactggggcgcgctcgcgaggcggctggctctgggcgcgctggggtgcgccgtgctctgctgcggcggtgcggcggtggcggcggaggactcgatcaaggcgtccggcttcgggctgcgtgtggcggcgtcgctgcggaggctcgggtgggcggacgaggccgtcgtgttcacgctcgctacgctaccggtgatcgagctgcgcggggccattccggttgggtactggatgcgcctcgaccccatccgcctcaccgtcctatccgttctcgggtttgtctctcttgcttacctttttccttttggcgagctttgcccatgaggtgttcgctgaattgcctgtgacactgggattgaacatagtgataatattcattgctacaaaatgttatggagctaatttgtattggaaccatctaaaatttgggcttctgttcacacgtccggcaaatcattatcacatttttacaggtcaacaaactagtgatgtaatgagctcacaatgtaggatacctgaaaatgatgactgcgagtttgcgattccatgccgattttacttaagtgtttaattcagagtactacttctagcaattagccaacagcacaagttttagtcaggttttaactgatcagttctgatttgttctggataaccattccagcgacaagaaccatgttgtaatttctttctttactatatgtatagtaactgattagtactgatttaatcattgtgacggattatgtgtgattattaatctatgaatgaattgttgagaatagagatgatgctcacttgtttacagtacaactttgcactcctacatgagaaaagcagttgaatggcagcaactaaagttaatatctgactgagtagtccttgcattgtgataattgataggattgtgaacttgtgatgggttgacaataatactaataaacattttggaaactgctagttatgacaaagactaacctggaacagaaactgctaataatgacaatagtagtaataaacaatttggttatgtctcttagaaaatgtagtgctaatatacagtggtacaaaatgttctggtgctaatttgcagaaccatctaaattttgggctttgttcacacagtccacaaatcaaaatcacagtttgatgaataaacaaagtaagggtctactgtaaaataataatatggtatgaataaatatgctagcctgatttacctaggtcctgggtaatggaatatgtatactgaaactaatgatggaataaactcacaatgtaggataacctggaaatgataactgcaaacctgcaattccatgctgattttagtcactgatgctacttctaggctctagcaattaaacaacagcacatgttttagttagattttactatatgtatagtgactgatcagttctggatcacaattccagcagcaagaaccttttgcaatttctttctttatgcatagttcctgattggttctgatttgttctggacagcagcaattccagcaacaatacctttctgccatttcttctttatgcataactgatcagttactatacataaagaaagaaactgcatatagtaactgatcagtgctgattcgatcaacgtgacagattatgtgtaaatatcaatctatgaatgaacatttgggataaaaatatgatgcacgcttgtttaccgtttaaatttggacctcctacatgggaaggtcagtaatttgaagcattgtcagcataagagagcaaagcagtgaaatggcagcaactaaatttaatatttgactgagtattcctttgtattgtgatatgatagggttgttaatttgtgatgagtcgacgacacatgaagttatttctcagtgacactgacacacctagaacagaaactgctagttataagttataacagtagtactaataaacaatttggttatatctcttggaaaatgcctcatcgtaaatatacagaatatccccacaaaaacaattcaggatctgatgccattatgttattatccaggaacatggtgcctgtgccattcattatcctctacctgaaaaaacttgcagcatttctctctcaaagaagcgcatctgcaactcggattatggatcttctctttgagcgggcgcggcagaaggctgcacctgttgaggaatttcaatggcttggtttgatgctgtttgtggctgtaccatttcctggaactggagcatggactggggcaataatttcatcggttcttggcatgccattctggtcaggtttttcagcaaatttcgtgggcgttgtcttagcaggactgttggtaaatttgcttatgaatcttggtttgaagtatgccattatcactggtttagttctgttctttttatcaactgtcatgtggggtgtccttcgatccctcaaaaaatcactgaatgctaaatgatgtaatgaacatgcaactattttttcgttgtaaagaagaattcacccttgtgagggaattctagctgtaaacttctccctctatttttcctattatacaaaatgaaaatgcttacctttgaggcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0800500, RefSeq:Os03g0800500