Os03g0801800
| Gene Name |
Os03g0801800 |
|---|---|
| Description |
RNA-binding region RNP-1 (RNA recognition motif) domain containing protein |
| Version |
NM_001058130.1 GI:115455988 GeneID:4334461 |
| Length |
7217 bp |
| Definition |
Oryza sativa Japonica Group Os03g0801800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:34288393..34295609 |
| Sequence Coding Region |
34288442..34288588,34288712..34288772,34288849..34288885,34289346..34289476,34289556..34289699 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:34288393..34295609 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:34288393..34295609 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggtaagcggaagcagcgcggcggcggcggcggtggcgggggagcagccacggaaggcggcgcggccaccggcggcggcgccggaggccacagcccctccaccgtgttcgtctccaacctgccgtacaccttcaagtcctccgatctcgaggcggtgttcagcgaggtcgggccggtgaggcgatgcttcatggtcgcgccgaaagggtcagagacgagcagaggctttgggttcgtgcaatttgcaactgttcaagatgctgagcgatctattcagcaaaaggatggattctctgttgctggtagaaaaattagagttaagctagcaacgcatcgtgctccactgaaggaacgtttacagaagaaggagaatgccgtgcaagccaaggatgccgatgcaacaaatgaagccaaggatgctgatgcaacaaatgaagccaaggatgccaatgcaacaaatgaagcatatgctacttctactgcaaaacacaaggagacatctcataaaacagatacagaaccactacagttgttgaaaaaggaaactacactatcaaaggaagtcagcatttccaatactgctaaggtgaaaagctcagaaaagcaaagggttgcaaaaactgtgatattcggtggtcttcgagactttgctatggcgagtgaagtatttcgtctagctggagagattggcacagttgtatctgttagctatccacttccaaaagaggaaatggagctccatgggcttgaacgagatggatgcacaacagatgcagcagctgtactttttgccagtgtcaaatcagcttgggattcggttgttcacttgcatcgtaaggaggtcaagggagcagttgtttgggctcgtcagcttggtggagagggctcaaagatcaggaaatggagagtgatagtccggaatctaccatttaagattacagtaaaggagatcatggatatattcagtttagcaggatttatatgggatgtgtccattccacagaagtctgatgacggggcatcaaaaggctttgcttttgtgtctttcacacgtaaacaagatgcagaaaatgctataaaaaatgttaatggaaaagtagttgcaaagagaactgtagctgttgattgggctgttccaaagaaagtatacactgttgctgcaaaatccagcactaaggatgatgagctggcaaatgtatcagacagaggcagtgacgaggagtctgaagataatcttgttggagaagatgatagctatgaacttgagcaggagacttccaattgtcctgctgatgatttcaaaactgaaatggatatttcaagaaaggttcttgaaaatttgatcaagtcatctgagagggctgaaccatctggcaatgagggttctgatattgatacagacacagaaacagaacaagatacatcagaaaagaaacagaagcagacccatttacctacatctgtacctgcagctgacaagttagaaaattctaaacgtgtggcacaggaggaaaacacccttcctgccacaaaattcaagaaacaagacgctgggctggataggacattattcataagcaaccttccttttgatctaagtaatgaggaggtaacagagcgcttctcagcatttgggaaggttgaatctttcttcccagttcttcacaaactcacaaagagacctagaggaactggttttctgaagttctctacaccagaggcagctgatgcagcagtttctgctgccaatgctgctcctggattgggaatttttataaagagcagggctcttaagataatgaaagcactggacaaggagtcagctcacaaaaaggaacttgagaaggcaaagaatgaggtggaggatcgacgtaacctatacttgactaaggaaggtgaaatacttgctgggacgccagctgcagaaggcgtatccgatgctgacatgaataaacgtagttggttagctagaagaaaagcggaaatgctccagtctccaaaatttcatgtgtccaaaacaaggcttatcatctacaacctgccaaagactatgaccattaatgatgtaaagaagctttgtagagaagcagttatttctcgtgctcacaagcaaaatcccgtcatccgaaaggtaaatattctgaaaaatgaaaagaagagcagcagtactgcacagaaacattcccgtggtgtagccttcgtagattttcaagaacatgagcatgctcttgtggctctaagagtcctaaacaataaccctgaaacttttggtgcagaacgtcgtccaattgtggagtttgcacttgagaacgttgagaaagtgagactccagaaaatttggaaggaccgccgtgataagttgcgagaagctgcgcaagataaggcgaggcctctgggagatcagtctgcaactgatggccctgatgcaaataacagaagggctttcaacaaagggaacaagagaaaatcacacgatagatcatctaagttaccctacgctggtgaagggcctgcagaggatctttcggcagctggagatggtggcactgtggaaagtatggttgaagataaaagaaaggatcaaaggcctgcaaaaagagcacgaaagtcaaacaagggaaccaccgcgttggatggagatagacaagatgcaacaccaaccgctgataggaatcgaactctgtcgagtaaacataatccggcagatgccctggcaaagaggaaaaacagaaatgatagtcattcggagcaaaagagaggaagggctcaaagaaagaccaagaaagagctggctggggaaggaagcgtggataaatcgctggtggagcaatatcgttccaaatttttgcaacatggtctgaacaaaaccaaaggataa</cdnaseq> |
| Protein Sequence |
<aaseq>MGKRKQRGGGGGGGGAATEGGAATGGGAGGHSPSTVFVSNLPYT FKSSDLEAVFSEVGPVRRCFMVAPKGSETSRGFGFVQFATVQDAERSIQQKDGFSVAG RKIRVKLATHRAPLKERLQKKENAVQAKDADATNEAKDADATNEAKDANATNEAYATS TAKHKETSHKTDTEPLQLLKKETTLSKEVSISNTAKVKSSEKQRVAKTVIFGGLRDFA MASEVFRLAGEIGTVVSVSYPLPKEEMELHGLERDGCTTDAAAVLFASVKSAWDSVVH LHRKEVKGAVVWARQLGGEGSKIRKWRVIVRNLPFKITVKEIMDIFSLAGFIWDVSIP QKSDDGASKGFAFVSFTRKQDAENAIKNVNGKVVAKRTVAVDWAVPKKVYTVAAKSST KDDELANVSDRGSDEESEDNLVGEDDSYELEQETSNCPADDFKTEMDISRKVLENLIK SSERAEPSGNEGSDIDTDTETEQDTSEKKQKQTHLPTSVPAADKLENSKRVAQEENTL PATKFKKQDAGLDRTLFISNLPFDLSNEEVTERFSAFGKVESFFPVLHKLTKRPRGTG FLKFSTPEAADAAVSAANAAPGLGIFIKSRALKIMKALDKESAHKKELEKAKNEVEDR RNLYLTKEGEILAGTPAAEGVSDADMNKRSWLARRKAEMLQSPKFHVSKTRLIIYNLP KTMTINDVKKLCREAVISRAHKQNPVIRKVNILKNEKKSSSTAQKHSRGVAFVDFQEH EHALVALRVLNNNPETFGAERRPIVEFALENVEKVRLQKIWKDRRDKLREAAQDKARP LGDQSATDGPDANNRRAFNKGNKRKSHDRSSKLPYAGEGPAEDLSAAGDGGTVESMVE DKRKDQRPAKRARKSNKGTTALDGDRQDATPTADRNRTLSSKHNPADALAKRKNRNDS HSEQKRGRAQRKTKKELAGEGSVDKSLVEQYRSKFLQHGLNKTKG</aaseq> |
| Gene Sequence |
<dnaseqindica>50..196#320..380#457..493#954..1084#1164..1307#1403..1493#1690..1823#1951..2090#3093..3143#3237..3319#3407..3461#3543..3654#3991..4483#4598..4811#4920..4990#5450..5618#5708..5837#6273..6685#6776..6979#gtcgagtacgggagcttgttcacacgcctcctcccctacgacgccggcgatgggtaagcggaagcagcgcggcggcggcggcggtggcgggggagcagccacggaaggcggcgcggccaccggcggcggcgccggaggccacagcccctccaccgtgttcgtctccaacctgccgtacaccttcaagtcctccgatgtaagcgcaagccgagccccaatcccaaagccttatcccctgcgaagctatgcggctagcatttttttgctgtttcggtctgcgaggctgtgatacgcggtgtgtattgctgtttttttttagctcgaggcggtgttcagcgaggtcgggccggtgaggcgatgcttcatggtcgcgccgaaaggtatgagaattcagtgacagtgagttcaatggctgtttagcagggagtaatttggttgtgtttgtttctaatgcagggtcagagacgagcagaggctttgggttcgtgcaattgtaagtttcattgcttgcttttctggttgttttccgatggaaatgtgtttccctttcctgccacaattccagaattcgagaagtgattttgatcgtgagtagtgtaatgctctagtgagcaaattgtttaatgctaagcggaaatacatttattcagtgtctctagtgatggtgtctggttaataccagcctatcaggtccctcacagaagttagccccacaccgatagttcttattacaagtatgttactgcacgaagctttcaccatatgttatgtactgtactaatgcacaaaccaaatcacaagaggttggtttagctcgatctttttgtttctcttacagatgtgtcgtgtgattattcatgtaggaatatctttctgcagaaaatatataggcataaggcataaaactgacgcgtaatctgttatacatttttgacatatttacattgatacagtgcaactgttcaagatgctgagcgatctattcagcaaaaggatggattctctgttgctggtagaaaaattagagttaagctagcaacgcatcgtgctccactgaaggaacgtttacagaagaaggagaatggtaaatttctatttctggtatttggttctgaatttcaattgattgagattttgattgcctggctgtttttgcttgtaagccgtgcaagccaaggatgccgatgcaacaaatgaagccaaggatgctgatgcaacaaatgaagccaaggatgccaatgcaacaaatgaagcatatgctacttctactgcaaaacacaaggagacatctcataaaacagatacaggtttgaaaggaaaattgttcgattccaacactgtttccattcctaaattttatcaatgctttaattttctgattcatggtgtattactgaaccagaaccactacagttgttgaaaaaggaaactacactatcaaaggaagtcagcatttccaatactgctaaggtgaaaagctcagaaaagcaaaggtgtggactcaaatattctataccatcaagccataacattacctaaaaacaatttaagtaattatgctgattttttcccccatcccattctagtttggtttccataacctcacaaaattcttagttttttcatggatatatgctgtaattgtttatttttcatccagcatgacatttgtaattgcttgtgatgaagggttgcaaaaactgtgatattcggtggtcttcgagactttgctatggcgagtgaagtatttcgtctagctggagagattggcacagttgtatctgttagctatccacttccaaaagaggaaatggagctccatggtatgacttattaagttttatctcattttcccagttcctgctgtacacacaattattctcctttaataccactagcatgtggttcttgaaacagtataatttatggaatggctgtcattctcaacagggcttgaacgagatggatgcacaacagatgcagcagctgtactttttgccagtgtcaaatcagcttgggattcggttgttcacttgcatcgtaaggaggtcaagggagcagttgtttgggctcgtcagcttggtggagaggtatcttcttgcattatatttaccttgatgtgctgccattacttcattattttagcttgatagacttgttctattctacaattaaacaaacttcaaatacttccgtttttcttccactttttgtttaccagtgtagtagtgcatgtgcacacatttagtttctcctcaaagctacatataattatccttatgttctaacctaaggtggctatcatgaattagtacggtaatttaaaacggatgggtatgtgctaattaaaaatgggttggaacttcaaattctggagtctcaaactaacaataactttctgctgctgtgtctcctggcaacgtcctgaataccacatatattacagatctcctgactacagtttcaaatatagttagttacagtgtcctgtaagacctgcaataagtaaactagatattttaccagaaccaacatagtgcctgttcattgcaatggatctaaactaaatattataagttctaaactagaaaaaagttagtatccccaaattttaaatattgcatacatagttcacattagatcagatggtgacatgcaatcgttcacaaaaggcactactatattattcatcataagatactaccatcaccaccgctaactccatttttgtatctgtaaaagatgtacaagcctctagagattgattagtcagtgagttaatcaagcttttctcactttcagttagaaagatcctaatattattccgtgaatgacacaatagatatgctaccgctttgtctccacttataatctactactactatcttgcatggctacaattgcagctgtgagaataggtgggtaggagatagaatgagattacttaaaatcctaattttcagttgttgtgtgtcccccttcttcacaagagttgcatggtgtttatctgtactctggaaccactatcatatgtttctcttcagctatttccccagttacctgcagttgtttctaacttgcttgctatacagggctcaaagatcaggaaatggagagtgatagtccggaatctaccatttaaggtgcttgattgaatgcaaaagttcacttgttccaagctttgtttcctagaagagataaaacagaggctatatgtttttgtttcattgttgcagattacagtaaaggagatcatggatatattcagtttagcaggatttatatgggatgtgtccattccacagaagtctgatgacgggtatgtttcgcgttgaatcctttatttcttcagcggtttaagcaaattgcaagatatgataactctgttgcattcattcttctacagggcatcaaaaggctttgcttttgtgtctttcacacgtaaacaagatgcagaaaatgtcagtgccctattcagtaagagcaaaaaaaaaaaaaatctttggaagtcctaatattttatatttttttctctttaacaggctataaaaaatgttaatggaaaagtagttgcaaagagaactgtagctgttgattgggctgttccaaagaaagtatacactgttgctgcaaaatccagcactaaggatgatggtaaatatatagacttttgtatcaattattttaattattgccttcgttcatcctgtgacctgcaatatctttatgtacttcaacgatattcttaacagctattttaacatggacatttggcttttggcaaaggtaccatgtcatttcgttggtatggtttctcaggcaacagataaacggtggttcatgttgttcaaaatgaccagctggcttcttgtttaaaaactaaatatttgttttaatacaccgtgtgccctcttaaatcctgtcaattctttgtgctttctgaactactactttggaagctgaaatatcatgaacttgctgtacctacagagctggcaaatgtatcagacagaggcagtgacgaggagtctgaagataatcttgttggagaagatgatagctatgaacttgagcaggagacttccaattgtcctgctgatgatttcaaaactgaaatggatatttcaagaaaggttcttgaaaatttgatcaagtcatctgagagggctgaaccatctggcaatgagggttctgatattgatacagacacagaaacagaacaagatacatcagaaaagaaacagaagcagacccatttacctacatctgtacctgcagctgacaagttagaaaattctaaacgtgtggcacaggaggaaaacacccttcctgccacaaaattcaagaaacaagacgctgggctggataggacattattcataagcaaccttccttttgatctaagtaatgaggaggtaacagagcgcttctcagcatttgggaaggttgaatctttcttcccagttcttcacaaactcacaaagtatgtttcaccatctgttagaacatcatatttcctttatttcctgctgttgtatcaaccagaggtcgtttgcatgtacactcattaatgcatgtttttgtgctatctatacaggagacctagaggaactggttttctgaagttctctacaccagaggcagctgatgcagcagtttctgctgccaatgctgctcctggattgggaatttttataaagagcagggctcttaagataatgaaagcactggacaaggagtcagctcacaaaaaggaacttgagaaggcaaagaatgaggtggaggatcgacgtaacctatacttgactaaggtaacctttttactagagcctcccccctcccccctcccttcccccctctctcactctctcatcatctcttaaatcaattttcctatctcaaattcattgttgcggcaggaaggtgaaatacttgctgggacgccagctgcagaaggcgtatccgatgctgacatgaataaacgtagttggtaagagttgatcttttccttctttctgtgcaccattagatcaccctacagctagtaccaatatagccaatgtcttttgacaagaaatataggcaaagtgttggttctattatattggtaaatgtccactgtacatgtgtgttaatatttctctgggaataaacagctatgatagatgcaatttttataattcattggcagcatgtggtgtctcaaccttttctataataaaaaggtgtctctgtacggcagatgaaactattgaatcatagtctttttccattaattttattttgtcaagtatttttcaattgtttcttctataatatgtatttagtttttttattgaatgtccagtaatctttcttaagatggagttttattatgctctcaatcatgggctcatggccaaaggatcatgtgaacaatgctcacgaaatctttgattttgtcatgtaggttagctagaagaaaagcggaaatgctccagtctccaaaatttcatgtgtccaaaacaaggcttatcatctacaacctgccaaagactatgaccattaatgatgtaaagaagctttgtagagaagcagttatttctcgtgctcacaagcaaaatcccgtcatccgaaaggtttgttgggttttctttattcaacctctgttttattctatttctaggtatctttataatgcttatgcatgtgcatttgtcttgaacaggtaaatattctgaaaaatgaaaagaagagcagcagtactgcacagaaacattcccgtggtgtagccttcgtagattttcaagaacatgagcatgctcttgtggctctaagagtcctaaacaataaccctggtactcttttctataccaaatgcttctaagtattgttttgttgcagccatgctgtctaactgcctcatcgtctcacttactttctaatgtgcaatatgtctttctctgagaagaatgtgatgtgttaatcttgcctattgcataatgctgcatccttggattgcatggaatcactgtatcacttgttcatggcttcgcgctacctatctgtgctgtttcttgtccaatcatgagctttctgtgtctttgagctgctgttagctctagctgcagttttcacttttcctcagtatgcagatcatcagagacatactatacccttaatgtcttcccttcctttctagtagtaactagcatttgcttgtttgctgctgcatttttttttagtgttgtctgtttatctccagttacattgttgttttttgtcatttgcagaaacttttggtgcagaacgtcgtccaattgtggagtttgcacttgagaacgttgagaaagtgagactccagaaaatttggaaggaccgccgtgataagttgcgagaagctgcgcaagataaggcgaggcctctgggagatcagtctgcaactgatggccctgatgcaaataacagaagggctttcaacaaagggaacaagagaaaatcacacgatagatcatctaagttaccctacgctggtgaagggcctgcagaggatctttcggcagctggagatggtggcactgtggaaagtatggttgaagataaaagaaaggatcaaaggcctgcaaaaagagcacgaaagtcaaacaagggaaccaccgcgttggatggagatagacaagatgcaacaccaaccgctgataggaatgtaagtaatattggaccttttgtttttcggcaccacaaaattatcgatctcgatgaagcgaagtagtttaacatagtctccgttttgcagcgaactctgtcgagtaaacataatccggcagatgccctggcaaagaggaaaaacagaaatgatagtcattcggagcaaaagagaggaagggctcaaagaaagaccaagaaagagctggctggggaaggaagcgtggataaatcgctggtggagcaatatcgttccaaatttttgcaacatggtctgaacaaaaccaaaggataattgagtgtgatcatcgtggggagaacaacatggtgacccggaccagcttgtcaaaaggctaaaatgtttccagagaactttccacaaactttgcagccccaccattggtctgccaaaattttgcttgctacattttggttgttttgtcccactcttgtcgatcttgacccttgatgacagtggctgatggtcgttggagccatctattatgaccatttgaatgggaatgcttatgtct</dnaseqindica> 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| External Link(s) |
