Os03g0801900

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Revision as of 13:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0801900| Description = Protein of unknown function DUF569 family protein| Version = NM_001058131.1 GI:115455990 GeneID:4334462| Length = 34...")
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Gene Name

Os03g0801900

Description

Protein of unknown function DUF569 family protein

Version

NM_001058131.1 GI:115455990 GeneID:4334462

Length

3451 bp

Definition

Oryza sativa Japonica Group Os03g0801900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34304100..34307550

Sequence Coding Region

34304220..34304969,34305357..34305645,34307251..34307285

Expression

GEO Profiles:Os03g0801900

Genome Context

<gbrowseImage1> name=NC_008396:34304100..34307550 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34304100..34307550 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctgttcgcgagggcgcaggtggtgaggctgaagagccaccacgacaagttcctctacgccgacgaggacgaggtgcacgtcacgcaggacaggaacggcgccgccacgaacgcgcggtggacggtggagcgggtgccgcactcacccggcgtcgtgcgcctccgcagccgatacggccgctacctctccgcctccaacgagcccttcctgctcgggatgacgggccgcaaggtgctgcaggcgccgccgcccggcggccgcgccaccgactcgtcgctggagtgggagcccgtcaaggacggcttccaggcgaagctcaagacgcggtacggccactacctccgcgccaacggcggcctcccgccgtggcggaactcggtcacgcacgacgtgccgcaccgcaccgccacgcaggactgggtgctctgggacgtcgagatcgtgcaggtgctcacccccggccacgaccgcgcccccacctccgccgcgccgccgtcgccggcccacgcgcccgagcttaagaagccgccgccgccgccggaggcgcaccaccggcccaccaagtcctacaccgggcacccgccgccgccgccgctggagaaagacgcgccgccgcagccgccgcgaccgcaggaggtccaccaccggcccaccaaatcgtacaccgggaacccgccgcagccgctggagaaagacgcgtcgccgcagcctccaccgccgaagcccgcgccctctagactcgagtcctccctttctttctctgcgccattgcacaaggtggagggccgtgcaatctactaccacattgcagatgataagggcgatgtggacgaagacgacgagacacgctcattcacattcaatggctccaacttggaggagctcacacacaagttgcaggaagagacgggcctccatgacataatcatctgcacacgcagccctatcactggcaaactcgctcctctccgcttgcagctgccaccaaacaatgcagcaatgcatattgtgcttgtccaggagtcctcaaaagtggcaaaaacatttccatggccatacggtccataa</cdnaseq>

Protein Sequence

<aaseq>MELFARAQVVRLKSHHDKFLYADEDEVHVTQDRNGAATNARWTV ERVPHSPGVVRLRSRYGRYLSASNEPFLLGMTGRKVLQAPPPGGRATDSSLEWEPVKD GFQAKLKTRYGHYLRANGGLPPWRNSVTHDVPHRTATQDWVLWDVEIVQVLTPGHDRA PTSAAPPSPAHAPELKKPPPPPEAHHRPTKSYTGHPPPPPLEKDAPPQPPRPQEVHHR PTKSYTGNPPQPLEKDASPQPPPPKPAPSRLESSLSFSAPLHKVEGRAIYYHIADDKG DVDEDDETRSFTFNGSNLEELTHKLQEETGLHDIIICTRSPITGKLAPLRLQLPPNNA AMHIVLVQESSKVAKTFPWPYGP</aaseq>

Gene Sequence

<dnaseqindica>121..870#1258..1546#3152..3186#gtcaccggccaactcaactcaactccacctcgtcgcctccgccgcttggagaagaagaagaagaagaagaaaatctctctcgcctcggagagaggaggaggaggaggagatccggcggcgatggagctgttcgcgagggcgcaggtggtgaggctgaagagccaccacgacaagttcctctacgccgacgaggacgaggtgcacgtcacgcaggacaggaacggcgccgccacgaacgcgcggtggacggtggagcgggtgccgcactcacccggcgtcgtgcgcctccgcagccgatacggccgctacctctccgcctccaacgagcccttcctgctcgggatgacgggccgcaaggtgctgcaggcgccgccgcccggcggccgcgccaccgactcgtcgctggagtgggagcccgtcaaggacggcttccaggcgaagctcaagacgcggtacggccactacctccgcgccaacggcggcctcccgccgtggcggaactcggtcacgcacgacgtgccgcaccgcaccgccacgcaggactgggtgctctgggacgtcgagatcgtgcaggtgctcacccccggccacgaccgcgcccccacctccgccgcgccgccgtcgccggcccacgcgcccgagcttaagaagccgccgccgccgccggaggcgcaccaccggcccaccaagtcctacaccgggcacccgccgccgccgccgctggagaaagacgcgccgccgcagccgccgcgaccgcaggaggtccaccaccggcccaccaaatcgtacaccgggaacccgccgcagccgctggagaaagacgcgtcgccgcagcctccaccgccgaagcccgcgccctctagactcgaggtttgtcatttgttcgaacatttcccttgctctccattgaattgaccagtgcatgttcgtcgaattggtctccatctcatcctgagatcattgacttcagatttggagcaaagaaagccatcattgacttcagatttggagcactctttaattgcgtaggctaatatgtcgtcctttggatgaactaaccaatcatttcataaagctgcttctagaatcaacaaatagagatgctcaaatgcaattagcaatcatttggaacttttaatcattatgtgtgccaagaaatttggaactattatagttgatttctccaatttcccaattacttctgaaacttttgcaatgattcagaaaattaacactgagacttccttgtgctgtcagtcctccctttctttctctgcgccattgcacaaggtggagggccgtgcaatctactaccacattgcagatgataagggcgatgtggacgaagacgacgagacacgctcattcacattcaatggctccaacttggaggagctcacacacaagttgcaggaagagacgggcctccatgacataatcatctgcacacgcagccctatcactggcaaactcgctcctctccgcttgcagctgccaccaaacaatgcagcaatgcatattgtgcttgtccaggagtcctcaaaaggtgaattttgtcattccttgttgttttcaccatcctaactactcctgcttctattggatgctattgtaaaagtaaaagaaactaaattttatttaggctaatgatatgccctgaatctgtctgattagtctaagattagatgatttgaggatggactagctcaatggcgcatttgacttaggtcttgcagagcataacgtgggtattaggtaaagttagttcagtgtgttgcttagttttatagctggaaagtagagccagaggatcaatggttgccattgttccctctcatgcttccagtcctagagtactttacctcttgttaactggagtactagagcctaatatatttttttatgagaacataatataatttgtttatgatatgatgataccagccaggcagccactaattttaagtttttcaaccagctgggaatcaaagaatggatatccacataaccaacttttacaatgctaaggcacccccttttcagcaagtttaggatagtaggatgtctttataatgaagttgtaggaaaggttcctttccgtactatgtcctcttcagattttggttcagagagtaagtagtagtaacttttttttaacgaaggttgccttatttcgtcgatagagaacataaaaaacacaaagccgagatttcagagagtaagcagtaaaaagaagatggatttagctgttaatgaggttgcactacacatccattacagctcaaccaaccgtttttgttatttagatccagttgaccttttacaatattgttgcaaattgtatgtgaagtccttgcatctaccaacggtttctgtcctagattatgtttcagactaaactttttatttagaagagtgaagaaatgtattagtgcatccttggattttgcagaacacgaatagcatgacaaggttcagtgttaccatgagctgttcatgttagatggtgcatacacaaaatctagtgccacatctcttctgatagagagctaccgtactgaagatggtggtatcattctgttagcagcaaacatagtacaattcaggtcgtgggttttccttaaacagtgaacataacttggtaatggttttgtggtctatatgacatgcgcatgcgcagcatcttttggtatttcaaccaaagaacccaattactaggaaaaagctacacttaccaaaaaaatgttacaaatttcttaccgacgctgatgtggcataccatgttttaatctagcttttctataacttccaattacttgaatcaaatgttgagagttttgttagtaagaattttgtaagagtttgttgccccatcttgctattacagtcagaatatggacaagtccatttgcatgtactcctttcgttctaaaataaacaaatctaggatgtgatgtgacgtaacagtgtatccagattcattgtataatgttacatcattctaggtttgtttattttggaacgaagggagtactctcctaacattatttttgttgagtgtactcagctgcttgctgagtgctctcaaccggatgatcttgatatttcttttcttcgtctaatgatcttccctttttgttgtgcatttcagtggcaaaaacatttccatggccatacggtccataatctatggagagaaggtagcgaattgggtggaatgattggttgtacatttactccattcatttttttccctgtaccagtggagtacttggtaggatctaattgtcgtgtgtatatagcctagcctaaattaaattagctgaggtattcgcatgcaaaaaaagaaaaagaaaagaagaggagatatttatagttcatagttgagttttgagacctcaaaccatctatacggctatacccttcatttattgatgatcttttttggggg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0801900, RefSeq:Os03g0801900