Os03g0803800

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Revision as of 13:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0803800| Description = Conserved hypothetical protein| Version = NM_001058148.1 GI:115456024 GeneID:4334480| Length = 5485 bp| Definition ...")
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Gene Name

Os03g0803800

Description

Conserved hypothetical protein

Version

NM_001058148.1 GI:115456024 GeneID:4334480

Length

5485 bp

Definition

Oryza sativa Japonica Group Os03g0803800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34389801..34395285

Sequence Coding Region

34389801..34389929,34392058..34392162,34392458..34393094,34393253..34393587,34394503..34395222

Expression

GEO Profiles:Os03g0803800

Genome Context

<gbrowseImage1> name=NC_008396:34389801..34395285 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34389801..34395285 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcggccgcgacaaccaccaatggccgccgccgcaccgaggctacgacccccgggaccccgccgccgcgtggcagggcgacgcctcgacctccgccgccgccgcggcggcggccgcgggggtaaacccctacatctacgtccccaacccccagtacgcccccaaccctctcaatctcgtcctcaatcatgtgctccacaaccccgccgccctcgccgcctaccatcaccagcagcagcaacagtaccaccaccaccagcaactcctccattcatctgcgtaccaccaaaaccctacccataatctccagcaccgcgctgccgtccctgcaccagcagcaccggcggccgcccctagcatccagcaccgccctgtcgcccccgcgacagccgcggccgcgccggggcagcctcagccgaagaagaagaagaaacagaaggagccggctccgcaggcgcatcccccgccacccctgcccccaccgcagcagcagcagcagcagcagccaaagccgcagcagcagccgggggctcttgagagggcgcaggcggcggcgaggaaggtgcgggacgagatcattaaggctggtgagggcgttacagggtggaagatagcgcaggcggtgctggtggcgctcaaagtggattcctggggctctcttggtgtccagctccatgaagtacccctcctgcgcgacctcttcctcgtcgagggcaaggtgaatacattcatccattgctatgttgcagcaaggaaaattgtttcagtttatgatttagagtctgagatatgcaaaaatgagagcattggacagtttgaagagttggggttggggccttttcttcagcatccacttgttgcacattatttttcagtacctgccgatttgtccttggtacctaagcttagtagtgacgagattataaattggcttcagaagtttatggacaactctaaaaagaaaattacagtggaaaacttcttggattatcttgcggagcaaaagtcagtctctggaaaggaaaaccttggtgtacgaatacaaagcttgaggttgcatatttcctttctccggcaggccaggagaactgaagtgtctgctgttaaagttcaaggcaacaccagtggctcaggtgatggtagttgtgagaaggatttggtgaaaaatagaaaatttcatttgagcaaacaggcattggatgagaggttcagtgctataactagtcgtataaagaaattaccaggtatcaataagcacatccattttgattcaaccgatgatgaaactgatggtgattctagttctgagggtgatgcagttgataacagtgagagtaaaactggttctgctgctattgataacaaggatgttgataagcgtgttagtagctgtccatatccttcaaaaacagaagaaatggagcgtcttggcttaaagtctgaaacgagtaaaaaaccacctttggatagtagcaaggtaaaagagagtagtaaaaagggttatacgagagaaaaaaggaaatctgaagagaatgggagccccacctcttcatgcaaacggcccaagaagaagcaaaaggttcaaatgcaaaagcatgagttatcacctaattgtttcttgagtataggtaagttggagaaattcataacgacctggaaggaagcatgccgtgaacatccagttcaacaggttttagagttgctagcaaattactatgcggaaacaccaaaggagaagaagaaaataataaagtttttctccgagtaccctggcattggcttcctaaatgttgccgttagagcgatgggatgtggtctgctggatagtctttatgatgcgatcaatgtctttaatgagaataaatcatcatcaaatattcctgataccaccactgagcttatggaagtggagccaccaccaagt</cdnaseq>

Protein Sequence

<aaseq>MSGRDNHQWPPPHRGYDPRDPAAAWQGDASTSAAAAAAAAGVNP YIYVPNPQYAPNPLNLVLNHVLHNPAALAAYHHQQQQQYHHHQQLLHSSAYHQNPTHN LQHRAAVPAPAAPAAAPSIQHRPVAPATAAAAPGQPQPKKKKKQKEPAPQAHPPPPLP PPQQQQQQQPKPQQQPGALERAQAAARKVRDEIIKAGEGVTGWKIAQAVLVALKVDSW GSLGVQLHEVPLLRDLFLVEGKVNTFIHCYVAARKIVSVYDLESEICKNESIGQFEEL GLGPFLQHPLVAHYFSVPADLSLVPKLSSDEIINWLQKFMDNSKKKITVENFLDYLAE QKSVSGKENLGVRIQSLRLHISFLRQARRTEVSAVKVQGNTSGSGDGSCEKDLVKNRK FHLSKQALDERFSAITSRIKKLPGINKHIHFDSTDDETDGDSSSEGDAVDNSESKTGS AAIDNKDVDKRVSSCPYPSKTEEMERLGLKSETSKKPPLDSSKVKESSKKGYTREKRK SEENGSPTSSCKRPKKKQKVQMQKHELSPNCFLSIGKLEKFITTWKEACREHPVQQVL ELLANYYAETPKEKKKIIKFFSEYPGIGFLNVAVRAMGCGLLDSLYDAINVFNENKSS SNIPDTTTELMEVEPPPS</aaseq>

Gene Sequence

<dnaseqindica>5357..5485#3124..3228#2192..2828#1699..2033#64..783#aagcgagttgctggctccttcttccgccgcacgctacccctcctccccgaccccgccgccccgatgagcggccgcgacaaccaccaatggccgccgccgcaccgaggctacgacccccgggaccccgccgccgcgtggcagggcgacgcctcgacctccgccgccgccgcggcggcggccgcgggggtaaacccctacatctacgtccccaacccccagtacgcccccaaccctctcaatctcgtcctcaatcatgtgctccacaaccccgccgccctcgccgcctaccatcaccagcagcagcaacagtaccaccaccaccagcaactcctccattcatctgcgtaccaccaaaaccctacccataatctccagcaccgcgctgccgtccctgcaccagcagcaccggcggccgcccctagcatccagcaccgccctgtcgcccccgcgacagccgcggccgcgccggggcagcctcagccgaagaagaagaagaaacagaaggagccggctccgcaggcgcatcccccgccacccctgcccccaccgcagcagcagcagcagcagcagccaaagccgcagcagcagccgggggctcttgagagggcgcaggcggcggcgaggaaggtgcgggacgagatcattaaggctggtgagggcgttacagggtggaagatagcgcaggcggtgctggtggcgctcaaagtggattcctggggctctcttggtgtccagctccatgaagtacccctcctgcgcgacctcttcctcgtcgagggcaaggtcagttttgcttgattagctgcagggacaacaatagtttgcaattaattgttgctactatgtatccctgcaaaatttgtatatgttctgttcagtcttaatttgcgtgcaattgctaaattctaaagctgaagtttcatgagaaaattgtagcataggtatgaaattctgcactgtgctgggtgcgttgctgtcgacatatgcaaatttcacgtttctcctttagtattaacttgccatctttgtttatttctttacattgtttcttttgttatataattgtatcacttgctgaatttccatttcttttatgtttttgctataatgttgtccctttacgttggaatggaacgagactacaagtggtacaagttctattcttcttctgaaacagaagaaaggaaaacaaatatcaaacggttgaaactttcttagcctgaaattacaaattgtttcagctcttggtgaaagaattaagcagttaaataaattaccaaagtcaatgttgcatagcatgccttggcagaagatagataatcagttacttatatatagtactgcgattaggtgacgccgtgataggtatttgatgcaaaggacccaaaaaggtggaatgatgtatgatatgggagataacataattctaaaagtagcaaactacttctgatataaaacaagctgaatattaagaacctttccatgcaaacatcattattgtgaaactgtgatattgaattagtttgatgtcgcttatttacaatatgtatcgaatttatttgcttttcctttgcacttttgagtgagcataaagctgctgaacttttgttgttaatatcaaatcatcagtatttggttcaattttacttcgtgatgctgcttatttatttcacatgggcatggccttttttttgtcaggtgaatacattcatccattgctatgttgcagcaaggaaaattgtttcagtttatgatttagagtctgagatatgcaaaaatgagagcattggacagtttgaagagttggggttggggccttttcttcagcatccacttgttgcacattatttttcagtacctgccgatttgtccttggtacctaagcttagtagtgacgagattataaattggcttcagaagtttatggacaactctaaaaagaaaattacagtggaaaacttcttggattatcttgcggagcaaaagtcagtctctggaaaggaaaaccttggtgtacgaatacaaagcttgaggtatgaatgttagaattgagcacgtacttatttattgacttcccccatgcgtccaacatttttagtggtgcatacttcaaggttgaaatagaaataactagtttcctttggtctttcttcagaattttcttctttttctaatttgggagattttgtaggttgcatatttcctttctccggcaggccaggagaactgaagtgtctgctgttaaagttcaaggcaacaccagtggctcaggtgatggtagttgtgagaaggatttggtgaaaaatagaaaatttcatttgagcaaacaggcattggatgagaggttcagtgctataactagtcgtataaagaaattaccaggtatcaataagcacatccattttgattcaaccgatgatgaaactgatggtgattctagttctgagggtgatgcagttgataacagtgagagtaaaactggttctgctgctattgataacaaggatgttgataagcgtgttagtagctgtccatatccttcaaaaacagaagaaatggagcgtcttggcttaaagtctgaaacgagtaaaaaaccacctttggatagtagcaaggtaaaagagagtagtaaaaagggttatacgagagaaaaaaggaaatctgaagagaatgggagccccacctcttcatgcaaacggcccaagaagaagcaaaaggttcaaatgcaaaagcatgagttatcacctaattgtttcttgagtataggtaagttggagaaattcataacgacctggaaggaagcatgccgtgaacatccagttcaacaggtatgctaattcatgatcatatttgttttctttctgtaattgttaacctgaatgatgccaatatttgtttgaaacaaacaggcaccataattatgtagctctatgtactgatatacaagtttctttcgatttatttgtgatatttgtcatacttgtttgatggtttggtcgtacaatgtacttcatttcattacttatttgaaaacacatcattgattgtttagaaagaggtaagtgtgtttagtctagacatttccaatttctaaactaaattgtcttgcatttcaccatgaaggttttagagttgctagcaaattactatgcggaaacaccaaaggagaagaagaaaataataaagtttttctccgagtaccctggcattggcttcctaaatgttgccgtgagttgatttcttctcctttactcatcccccttattcgttttacttgtatctattatctactatccatactatccaaatatgttgcacaaaatggctttaaccttttagttgctacctaattcattttaagacagcgggttaatgaactcataggatttatagatgcgacttgcaagttatatcctctgttgagtgggccattctatgtctgcgtgtgttcgagactgtcattatttgtgtttgacaagcagatttgtttgtctttgatcaatcctatgtgtgtgctcatctgtactattttatctcctgtcctcccatatttgtccatttcatcctggagaaaattcaaattcggcttttggaatgcagtattccagtacctgcccatttcaatttagcgtttggggttgtaactccgttttcaaataactaataacctagactcttgatttgaactttgaccactaattactcttaaatgattgggctaaagtgcagaaaaagtttcatgcttgtattgaggacataatacactttaataacatggcaacctttttaatgtttttagatattttgcaaaaaaggactagtggtcaaaggttaaaaaagattagttcccattatcagttatttgaaaacggagtaataaataaaatttaggagtatatatgatactacctccgtctcatattacttgtcgctttaagtttctgtttgtaatgtttgatcattcgtcttattcaaaaaattttggaattattatttattttgtttgtgacttgttttattatcaaaagtactttaagcttgacttattattttttatatttgcactaatttttaaataaaacgaatggtcaaacgtttcaagaaaaaagtcaaagcgacaagtaatatgggacggaggcaatacttatgatagttatgtgtttaattcttgtcattttagcttgattatttcatttgggcttggaatggagaaaacattattcagattttggctggtatttgaatgagtggaaaggctgattctgcccggaacaggatggaataaccagcatagtagctgctagtacacagcctcctctgctggtttgggtggtggtactgcacattccagccagttccagattccagaatggaattgataagatctcttctttgccacttctgaataatggaataagaagaattcttccattctttttctcgagggagaaaaaccaaactaaagcagaattcctagtaaaaataaatccaggattcttccacttagatgaaacagcttagatgaaatagtaagtaatagtcccgctcgcatccatggtaaatgttaaaggaattatacttgcagggatacggaaatacgctagtcactcagtttctgaagactcaagctgttgatttcagctttcgtaggggtcatttggggattgtttaagcatagggatgggcgaggtatggttcaattgacaggtggttgttatgtgaattgaattttcattttacaatcaagtgactgttaaaaaaatacaataaagtggctgaaaataggttgtggtagaaacaaggtacctggtgactatgtccctttttttagcataggccttagagatagtttaccacagcacacaagagcatcacttcatcagttcgtggacctctaccaacgatgtccataacaaatgaggtgttgattttttttattttcttgtagttatctgtctagtattcatatggtagtgcactaaataaataaattccaatatatattgtcctgaagcatccatgactagccagattttgcatgcagttacacatgttttctccctggagatatttgctttacctttcttggtggaggtattatttctatggagagccaataaaggattgaattgtgttttaacagcttgcattatttaagtaaatagacttttttttaaaggactaacagtgtccaaccagcaaaatctggcccagccataaactatggttgggacacattgaacaggacaaaccgactttacttgcctaagagcatttcttccctttctccatttgctataatagtttggtaccattttggggtgtttgttttatgtactgcaacatggatatgcaggttagagcgatgggatgtggtctgctggatagtctttatgatgcgatcaatgtctttaatgagaataaatcatcatcaaatattcctgataccaccactgagcttatggaagtggagccaccaccaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0803800, RefSeq:Os03g0803800