Os03g0804400

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Revision as of 13:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0804400| Description = Conserved hypothetical protein| Version = NM_001058154.1 GI:115456036 GeneID:4334486| Length = 5640 bp| Definition ...")
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Gene Name

Os03g0804400

Description

Conserved hypothetical protein

Version

NM_001058154.1 GI:115456036 GeneID:4334486

Length

5640 bp

Definition

Oryza sativa Japonica Group Os03g0804400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34430188..34435827

Sequence Coding Region

34430374..34430556,34431480..34431577,34432019..34433054,34433151..34433759

Expression

GEO Profiles:Os03g0804400

Genome Context

<gbrowseImage1> name=NC_008396:34430188..34435827 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34430188..34435827 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtccgccaagtcgacgaggtcgcgcccagccgggcactccggcgtgctgccggtgaacgctacggccggaggcggcgacggcggggtgcctctcgccgacaagatgaagatcttcaagaccgacaacttcgaccccgacgcgtacgtgcagtccaagtgccacgccatgaacgagaaggaaataagacacctctgttcttatctgcaagacctaaagaaggcttcttctgaagagatgcgtagaagtgtttatgcgaattatgctgcattcataagaacatcaaaggagatatcagaccttgaaagggagctgctatctgtcagaaatctgctaagtacacagtcagctctaattcgtggtctatctgaaggggttcatattgattccttgactacagggtctgaaggctctgcagaagaggggacagatgaagaccaggagccctcagaaatacaaaactggtgcacagatttccctgagatgcttgatgttttgctagctgagagaagagtggatgaagcattggatgctttggatgaagcagaacgtgtcgttgctgatgaaaaacagaaacagacactcaccacagctgacattctggccgtgaagagggctatctctgataatcgtctgaaattggcaaatcagctagcagaagctgcttgccagtcttctactcgtggcgttgaacttcgtgcttcagcttctgctctcaagagactcggtgatggaccccgtgctcatagtttgttgcttagtgcacacaaccagaggcttcaatgcagcatgcaaactatacatccgtctagcacatcacacagtggggcatacactgcatctcttgcacggcaagttttttctgttatagcccaggctctcagtgactctttagaactgtttggtgatgaaccgtcttatttgtctgaactgattacatgggctacagaacaagcaatgttatttgcactacttgtaaagaggcatgctttagccgcttgtgtggctgctgggggcttgagagctgctgccgaatgtattcagatctcacttggtcattcttccttgctggaaactcgtggtttgtcactttcgtctgttctgatgaagcaattcaaaccctctgttgagcaagcactggagtccagtttgaggagaattgaagagagtactgctgctttagctgcagctgatgactgggtactcacctatcctccatctggtatacggacgtttgctagatcatctgctagtagtttgttgctccaacctaagctctcaaacagtggccatcgcttcagttcaatggttcaggatttctttgaggatgttggcccactgcatagcttgcagttaggtggttctgcaatggacgggcttctgaaaatattcaattcatatgtcaatctgctcataagtgctctgccacactcactggatgatgaagcgaatttggaaggtttaggaaataagattgttcgagtggcagagactgaggagcagcagctagcattgttcgctaatgcatccttactagctgaagagttgctacctagagcagctatgaagttgtcgtctgtaaaccatactggtgtgaatgatattcgtaaaaaaagtgtagacaggcaaaaccgtgtagcagagcagcgagaatggaaaaagaagctgcaacgtattgtggataaacttaaagatagtttctgcagacagcacgcccttgatcttatattcacggaagatgatgacacccgtctgagtgcagaaatgtacatcaatatggataatactgttgaagagccagaatgggttccatctctaatttttcaggtccgtataaattttttgcccttaacaactatctggataaacattactgcttatatttgtttgaagaatgaggttcattatgacattcatcattga</cdnaseq>

Protein Sequence

<aaseq>MSSAKSTRSRPAGHSGVLPVNATAGGGDGGVPLADKMKIFKTDN FDPDAYVQSKCHAMNEKEIRHLCSYLQDLKKASSEEMRRSVYANYAAFIRTSKEISDL ERELLSVRNLLSTQSALIRGLSEGVHIDSLTTGSEGSAEEGTDEDQEPSEIQNWCTDF PEMLDVLLAERRVDEALDALDEAERVVADEKQKQTLTTADILAVKRAISDNRLKLANQ LAEAACQSSTRGVELRASASALKRLGDGPRAHSLLLSAHNQRLQCSMQTIHPSSTSHS GAYTASLARQVFSVIAQALSDSLELFGDEPSYLSELITWATEQAMLFALLVKRHALAA CVAAGGLRAAAECIQISLGHSSLLETRGLSLSSVLMKQFKPSVEQALESSLRRIEEST AALAAADDWVLTYPPSGIRTFARSSASSLLLQPKLSNSGHRFSSMVQDFFEDVGPLHS LQLGGSAMDGLLKIFNSYVNLLISALPHSLDDEANLEGLGNKIVRVAETEEQQLALFA NASLLAEELLPRAAMKLSSVNHTGVNDIRKKSVDRQNRVAEQREWKKKLQRIVDKLKD SFCRQHALDLIFTEDDDTRLSAEMYINMDNTVEEPEWVPSLIFQVRINFLPLTTIWIN ITAYICLKNEVHYDIHH</aaseq>

Gene Sequence

<dnaseqindica>187..369#1293..1390#1832..2867#2964..3572#attattccacgtacccaaagaaaaacatcccccacccaaaaaaaaaaaaaatccgcgcagctgcaaaggcgagcggagctctcaatcgagcagcggttccacttctagaagcttcttaatcacgcgggaggaaggagaggggaagccggcggcggcggcggcggtggggttcgcctgcgcgcggcgatgtcgtccgccaagtcgacgaggtcgcgcccagccgggcactccggcgtgctgccggtgaacgctacggccggaggcggcgacggcggggtgcctctcgccgacaagatgaagatcttcaagaccgacaacttcgaccccgacgcgtacgtgcagtccaagtgccacgccatgaacgagaaggtaaagggattggtccactcgtgaaacggggaggaaactggagtggtagaattttggtcggaagttcacacgcgcttttgctgttctgtgttcgagaggtgtgagggatacggtgtcgggagtttcccagtgcatttgaactagcgaaagtgtgaattgagcgttattaggattgtttcccttagagggaaaacggtggttgcatggaactagatatgtttattgtgtttgatttttttcatgttcagatactagttatgaaacaggttttttttactctgatgcggagaaatactgattctggccagtactgacaaatttctggttgcgctgcatgcttgcgtagttgaattgaggtcgaattaagtttgtcaataaccttgaatttgcatttgtctggagcttggagggagcactgaagtagagtgctgttagtttgttagttttatgttatcttctagagaagtgaccacatgtagatttacacatatttgcaaagaaccggagtttgtactatattatggcggctctggtgatgaaatgaatcgtacgcaaattttgtaagggttctttttttgttttagaaagttggcgtttattgtatatgagataaatggttgcctttaaattgcttttacctattgttttgtgcgggagaccacttgtgctcatggttgtcaaaggatttgggtagcaacgaatggatgatcctacacttctaccttttctgcatgagttatgctcacttaagacctattttgcagttgtgccgtatcatgcatgtgtgcattttctgaggcttcaaatgttgagtttcctttgcatgctccctgtgtgtgttttagagcttgaactattactttagtaaaaggcacatcatgcttggaaaatctaacaggattgatgctcaaaaactgtgacaggaaataagacacctctgttcttatctgcaagacctaaagaaggcttcttctgaagagatgcgtagaagtgtttatgcgaattatgctgcattcataaggtgtgaacacaattgttgaaattttaatctaacccaagggagtatatccctggactcagagtatcgtgtctgattattctccaatttttattctttttgtttctctaaaatgagtatgcctgctagctttgtttattgctaatctttggcatctcaaccgctgcgcactccatacaagttcataaaattttgaattagtattttgtaagaatcacaatccaaagaattattgaaaaaagaaaggtaggcagcggatttgtcgtttctgcaaaattatatgcagatgtcataaaacttgtgggatgcaaaatcataattgtatttttttttcacatctggtatttctctgtttttcttagttacttcctgggattgttctctgttttatccagttcataactttcggataaaatgttgataactcaatctcctggttttcagaacatcaaaggagatatcagaccttgaaagggagctgctatctgtcagaaatctgctaagtacacagtcagctctaattcgtggtctatctgaaggggttcatattgattccttgactacagggtctgaaggctctgcagaagaggggacagatgaagaccaggagccctcagaaatacaaaactggtgcacagatttccctgagatgcttgatgttttgctagctgagagaagagtggatgaagcattggatgctttggatgaagcagaacgtgtcgttgctgatgaaaaacagaaacagacactcaccacagctgacattctggccgtgaagagggctatctctgataatcgtctgaaattggcaaatcagctagcagaagctgcttgccagtcttctactcgtggcgttgaacttcgtgcttcagcttctgctctcaagagactcggtgatggaccccgtgctcatagtttgttgcttagtgcacacaaccagaggcttcaatgcagcatgcaaactatacatccgtctagcacatcacacagtggggcatacactgcatctcttgcacggcaagttttttctgttatagcccaggctctcagtgactctttagaactgtttggtgatgaaccgtcttatttgtctgaactgattacatgggctacagaacaagcaatgttatttgcactacttgtaaagaggcatgctttagccgcttgtgtggctgctgggggcttgagagctgctgccgaatgtattcagatctcacttggtcattcttccttgctggaaactcgtggtttgtcactttcgtctgttctgatgaagcaattcaaaccctctgttgagcaagcactggagtccagtttgaggagaattgaagagagtactgctgctttagctgcagctgatgactgggtactcacctatcctccatctggtatacggacgtttgctagatcatctgctagtagtttgttgctccaacctaagctctcaaacagtggccatcgcttcagttcaatggttcaggtaatgttctattgcttgacaaatgtttctagcctttgtaattgaggatttatacataaagttattcttttaatgttttactgtattattttgcaggatttctttgaggatgttggcccactgcatagcttgcagttaggtggttctgcaatggacgggcttctgaaaatattcaattcatatgtcaatctgctcataagtgctctgccacactcactggatgatgaagcgaatttggaaggtttaggaaataagattgttcgagtggcagagactgaggagcagcagctagcattgttcgctaatgcatccttactagctgaagagttgctacctagagcagctatgaagttgtcgtctgtaaaccatactggtgtgaatgatattcgtaaaaaaagtgtagacaggcaaaaccgtgtagcagagcagcgagaatggaaaaagaagctgcaacgtattgtggataaacttaaagatagtttctgcagacagcacgcccttgatcttatattcacggaagatgatgacacccgtctgagtgcagaaatgtacatcaatatggataatactgttgaagagccagaatgggttccatctctaatttttcaggtccgtataaattttttgcccttaacaactatctggataaacattactgcttatatttgtttgaagaatgaggttcattatgacattcatcattgaggtagttcttctatgatctataaaatatattgatttttagatgaattgttgtaaaataagtaaaccaaattgtttttctgaatctatgctctatagcacttcctttcttgtttatatacatagaagacatgaaaaaccgaggaatgatgcaagggttagatacatagaaggataaagtaaatatagcatgtttcatgcatgcccacttgacatgtacacattacgtcttaatcagcataaacttggtaaaattggccttgtcgtgtccttttggccttggttcgcacacactagacaagtctttgcactaaaacgagtgtttgccaagttcatccactagattgcacccaccaaacaagttcatgtaccaccaatgcaattcactcatatggtaaagaagttgcattcagcttgcaaataatttcctagttattgcttgtgctattatactggtatgtctagcccaacattaacaagatcaaccaaattgtagaaccaacagtacagaactctgtttggttcctgatgagttgtcaccaaaaatagattttggcagctggctggcttgcaattttgttcgaagaaatgctttatttagaaattgaaaccagaaaattttgcactttgagaaatataacaaaggtacaattttgaattagataatagacttcagtattttgtcaggcagaaattttgttaatgtaaagcttagatgacaactcatgaaacttgggcagtcatgctgcttgcaaatctacccaagaaactttagccttttgttgcagcatctcatatattgttgcaggaattatatgcaaagttaaacaggatggcgagcattgctgcagatttgtttgttggtagggaaaggtttgctacattcctactgatgcggcttacagaaacagtcatactgtggctatcagaggaccagagcttttgggaagagattgaagaggggccaagggctctgggtccccttggacttcagcaggtgagttctttttttcttgttttgatcttatgacaccaactattattcttattttcaccttccttttcagttctacctggatatgcaatttgtcatcctttccgggcgaggccgtttcttatctcggcacgtacatcaagtgatactgaaaatcattgatagagcaatggcagcattttctgctacagggatgaaccctgataggtatgttactatctatctgacttgcatctatccttttgcggttaataaatctatttcagtccgactgtatttagtaggaggtgctaatattaatatctatgcatgttatgctgtaatggcaatcggatgcatgcatgtattttgctccatgttacaattgtaatagattcctcacataccagaaactggctggaataggctagtgattatgcaattcctggtttattcattttttagataataattcctggtttattcatagctggaataggctagtgattatgcaattcctggtttattcataaaggttggtaactgaagatgatatacccgtttattctctgcagtgtccttccaagcgacgattggttcatcgacgttgctaatgacactatcagtaggatcagtggcaaccctcgaactgccaatggggatagggaggtgaacagcccgacagcctccgtttcagcgcaatctatatcgtcggtcagatcccatggcagctcctagtgtacatagtagccttagtaaccaggtcttgtataggagtgagtgtgaaatagtttctccatttccctgttgtattctctccttaggtcttgtataggagtgagtatctcctagctttgttccccatctggtgtacatgccagtatatagacctcgtttggatgggcctcaatcccagtccatccatgtgtataggccaggattctgaactaaaatcctggcccaaactcatggatggaatgggattctgcatattccaaaggcggccttaggaaaatatttgaattgaatcggttgttcagagatgtgtctttgtaaatttggtgagaaatgtatgacccagtgtagtttgtcttcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0804400, RefSeq:Os03g0804400