Os03g0804800

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Revision as of 13:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0804800| Description = Similar to Cct8-prov protein| Version = NM_001058158.1 GI:115456044 GeneID:4334490| Length = 5287 bp| Definition = ...")
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Gene Name

Os03g0804800

Description

Similar to Cct8-prov protein

Version

NM_001058158.1 GI:115456044 GeneID:4334490

Length

5287 bp

Definition

Oryza sativa Japonica Group Os03g0804800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34443481..34448767

Sequence Coding Region

34443580..34443733,34444270..34444532,34444633..34444779,34444862..34445023,34445790..34445867
,34446438..34446571,34446811..34446883,34446961..34447038,34447111..34447233
,34447332..34447426,34447832..34448041,34448224..34448281,34448377..34448442

Expression

GEO Profiles:Os03g0804800

Genome Context

<gbrowseImage1> name=NC_008396:34443481..34448767 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34443481..34448767 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggggctgggcgcgatgccggggtacgggatccagtccatgctcaaggaggggcacaagcacctctccggcctcgatgaggccgtcctcaagaacatcgacgcctgccgcgagctctccgccatcacccgcacctccctcggccccaacggaatgaataagatggtcattaaccatctcgacaagctctttgtcacgaacgatgctgcaacaattgtgaatgagctcgaggtccagcaccctgctgctaagatcctggtactagctggcagggctcagcaggaggaaatcggtgatggagctaacctcaccatatcttttgctggtgaactgcttgagaaggccgaggagcttatcaggatggggttgcatccaagtgagatcatcattggctacaccaaggccattaataagactgttgagatcttggaagatcttgtggagaaaggttcagagaacatggatgtgaggaacaaggaggaggttgtgttgctgatgagatctgcagttgcgagcaagcaattcggtcaggaggatatattgtgccctcttgtggctgatgcctgtatgcaagtctgcccgaaaaatcctgctaacttcaacgttgacaatgttagagttgcgaaactacttggaggtggtttgcacaactcttctgtagtccgggggatggttctgaaaaatgacgctgttgggagcatcaaaagggtggagaaggcaaagattgcagtatttgctggcggtgttgatacttctgcaactgaaaccaagggaactgttttgatacattctgctgagcagctagaaaactatgctaagactgaggaagctaaggtggaggagcttatcaaagctgttgctgactcgggtgcaaaggttattgtcagtggagcagcagttggcgacatggcactgcatttctgtgagcgttacaagctaatggttcttagaatcagttcaaaatttgaactgagaagattttgccgtactacagggtccattgcacttttgaaactcagccgaccaaatgcggatgaattaggatatgcagactctgtttcggtggaagagatcggtggtgcccgagtaactgttgtcaagaatgaagaaggtggaaactcagtggctacggttgtcttaagaggcagcaccgatagtatattggatgatcttgaaagagctgttgatgatggtgtgaatacttacaagtcaatgtgcagggatagtcggattattcctggagctgctgcaacagaaatagaattggcaaggagattgaaggaattttctctgaaggaaacagggttggaccagtatgccattgcaaaatttgctgaaagttttgaaatggttccaagaaccctggctgaaaatgctgggcttagtgctatggagataatatcttccctttatgctgaacatgctggtgggaatacgaaagttggtattgacttggaagaaggtggttgcaaggatgtctcaatcatgaaaatatgggacctttatgttacaaagttattcgctctaaaatactctgcggatgctgcatgtactgtactgcgggttgaccagatcatcatggcaaagccagcaggagggccaaggagagatgctcagcctggaatggacgaagattag</cdnaseq>

Protein Sequence

<aaseq>MVGLGAMPGYGIQSMLKEGHKHLSGLDEAVLKNIDACRELSAIT RTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKILVLAGRAQQEEIGDGA NLTISFAGELLEKAEELIRMGLHPSEIIIGYTKAINKTVEILEDLVEKGSENMDVRNK EEVVLLMRSAVASKQFGQEDILCPLVADACMQVCPKNPANFNVDNVRVAKLLGGGLHN SSVVRGMVLKNDAVGSIKRVEKAKIAVFAGGVDTSATETKGTVLIHSAEQLENYAKTE EAKVEELIKAVADSGAKVIVSGAAVGDMALHFCERYKLMVLRISSKFELRRFCRTTGS IALLKLSRPNADELGYADSVSVEEIGGARVTVVKNEEGGNSVATVVLRGSTDSILDDL ERAVDDGVNTYKSMCRDSRIIPGAAATEIELARRLKEFSLKETGLDQYAIAKFAESFE MVPRTLAENAGLSAMEIISSLYAEHAGGNTKVGIDLEEGGCKDVSIMKIWDLYVTKLF ALKYSADAACTVLRVDQIIMAKPAGGPRRDAQPGMDED</aaseq>

Gene Sequence

<dnaseqindica>100..253#790..1052#1153..1299#1382..1543#2310..2387#2958..3091#3331..3403#3481..3558#3631..3753#3852..3946#4352..4561#4744..4801#4897..4962#gcccacactagggtttttgatccgcttcgccgccgccgccgccgccgcctccttctcctcctcctccgcggccgtcaccgatctcatccgccgccgacgatggtggggctgggcgcgatgccggggtacgggatccagtccatgctcaaggaggggcacaagcacctctccggcctcgatgaggccgtcctcaagaacatcgacgcctgccgcgagctctccgccatcacccgcacctccctcggccccaacggtgaggcccccttccctctccttccccgctctgtgctccggcgtcttcgttgcccgcgttttgatccgagaagtttgggatctagcgatgtgccacggcggactcgatcgatatatcaaatctggggagtgtcgcgcgcgtgatgtggtggtacggtagaaatggttaggctatggcccttgttgctgcatccacagtgtgttaattatttagctgcagaaaagatgagcttttgtttgttcaacccttaggtaatgaggttgaagacagtattgtgatgaagtcgttagtagtgtttcacatttagctaatttaatggtgcagagaaaagttgtggatcttttggacactaaaaaattgtggtgcctgtcttgcggttttaggttgagttcagttaatttttcagcgatttattgttagaggccagcagtaaacatgctcctgcgctacatttttctgtgatgtataatatctgacagattcatgttagtatcagaagctagtttcttaacagcatcgctgttttgttttggtaggaatgaataagatggtcattaaccatctcgacaagctctttgtcacgaacgatgctgcaacaattgtgaatgagctcgaggtccagcaccctgctgctaagatcctggtactagctggcagggctcagcaggaggaaatcggtgatggagctaacctcaccatatcttttgctggtgaactgcttgagaaggccgaggagcttatcaggatggggttgcatccaagtgagatcatcattggctacaccaaggccattaataaggttacttaccctcccgattgagctggccttatattgattaaaaaaacctgttgcctgatggcaggctagttattcatgcatttgcatctgcaatgcgcagactgttgagatcttggaagatcttgtggagaaaggttcagagaacatggatgtgaggaacaaggaggaggttgtgttgctgatgagatctgcagttgcgagcaagcaattcggtcaggaggatatattgtgccctcttgtggctgatgtaagacaattcttaccatcttatgtgagagggagctcatttcttaacaactaatagctggttttttaccatggattttcaggcctgtatgcaagtctgcccgaaaaatcctgctaacttcaacgttgacaatgttagagttgcgaaactacttggaggtggtttgcacaactcttctgtagtccgggggatggttctgaaaaatgacgctgttgggagcatcaaaagggtggagaaggcaaaggtgacaactaaatgttacacttaattggtggtgtgtcttttggcagtctgttgatacattatctattttcgattgatgatactgtcatgcttttatagtgagggctgtttccacactgtatactatcatacattaggtggtgttaacatatattttcctttctcatccctttcatggatgaagcatatcatcacttgggatcaaatatttgttattctattctttgtagcttcccaccataaaatcgatagtaataactaaataattcatctttttgaaattttgatttgagatatgatacttatttttctttgtcatttcacactgatgatgtaaaggattttctcaaggcttgcttggtggttacatttaatggaatatatcttgctaacaagctttgaaggtagcagggttctaaaatttggtagtcagtcttcaattggtctccacctagttatgatcatatggcttaattaggaattgcatgataacattcttctttccttgtatatggcatagtagtagcaaaccttctttagaatacctgtggcatttttacagtttttttgttgatgtgctcaataatcttacatatggtacatggtcaattagaagctgtacacctacattacaataaactgcaaccttgtagacctattcatgtattcatgcactgtatgcacattgtagtcttagccaatccaagttacatgatcttctctatacaatgccggtcaatatctgctctaatttctaaatcaatcagattgcagtatttgctggcggtgttgatacttctgcaactgaaaccaagggaactgttttgatacattctgctgagcaggtatgttcttaataaagaaacatcgttttttggcctaattatcacgaacgttttactgcagttagtatagttcgagtttcaactttcaagttatgtgttctattatattacccattctcatttatagactaatccattacagtgttatcttctaattattattttgctttcttttgtttattttttgaacttctttccgtgtgtgtgcctttacacctttaaaaaaatacaaattaccccttgaacttcttaatattgataaaacatcaaatctaaatggatagccacatataagtgaatattcccaatagcagaaaggtgttaacacatttcatgaaaaaaatattttattttattttatccgtagcaaagcatgggcattaagctagtttccacttataatctattttgtaggttgtaaaataccaatgagccctagttgcaattataactcaatatcctagtatgttctgaccagcacagggttcttgcttctgtagtttatcaaaagcactgtcttccacaaatatcttctgcagagtaggcactcatacttgtactgttgtgcagctagaaaactatgctaagactgaggaagctaaggtggaggagcttatcaaagctgttgctgactcgggtgcaaaggttattgtcagtggagcagcagttggcgacatggcactgcatttctgtgagcgttacaagtcagttctttgcatcttatgtgaatgggcttgatatgttatataattctctcttcttcttttttgcaacttcttatttacatctcaaaactgaaaatattataaatactctactcaactgaaatcctcagatggaagttctaatgttgatgttgaaaggtgtctcaaagttgggtcactgtaatgattatgattaggttctgttttacagtagtacttaccattctatttatttgcaggctaatggttcttagaatcagttcaaaatttgaactgagaagattttgccgtactacagggtccattgcacttgtaagttctgatctcaagcttttgttcaattgcacagtagtatgtatatgctgatgcatgtgctctttcaaaaacagttgaaactcagccgaccaaatgcggatgaattaggatatgcagactctgtttcggtggaagagatcggtggtgcccgagtatgtttcatgcctctgttcctttccaatagacatgacttcattcttcttaccacgtttaattctttataggtaactgttgtcaagaatgaagaaggtggaaactcagtggctacggttgtcttaagaggcagcaccgatagtatattggatgatcttgaaagagctgttgatgatggtgtgaatacttacaaggtatgactgtaaatcaacttcctgtcattgttttggaacatacatgctactcttatttaattagctaacaggttacctgactgttggtgtttatacagtcaatgtgcagggatagtcggattattcctggagctgctgcaacagaaatagaattggcaaggagattgaaggaattttctctgaaggaaacagggtaagtatatttgttagacaaaattttcatgtgtggaacatgatgataaaaatatgttccattttttactacttttggtctgacaaacttttgttgtttccagtcgactgtcaataaatataataagccctattgctaatgttctcctgtaatatttgaattaaactatctgaagtccaggtgcagcttacttatatattgaggtgtccatactgcctaacccatctggattttttttaaaaaaaatgaattcgcttgtagttttctagagttttatacgtcagtatgcctgatacatttgattcatgagcatctgtttatgtaccttggtttatgatgttcattgtccttagtatatacattgttgctttttgcttcctatattgatagttaacaattatgcaggttggaccagtatgccattgcaaaatttgctgaaagttttgaaatggttccaagaaccctggctgaaaatgctgggcttagtgctatggagataatatcttccctttatgctgaacatgctggtgggaatacgaaagttggtattgacttggaagaaggtggttgcaaggatgtctcaatcatgaaaatatgggacctttatgttacaaagtaagtcatatgccataaccttccagtatggcataataggtgcacgtactgtatgggaagcacgctgttttttacttttcgtgatacccatgtattcattttttttattatttgcatgtttactggcgagacttaagcaagttggccaacctcatatcatgtgtgttcttttctctcatcaggttattcgctctaaaatactctgcggatgctgcatgtactgtactgcgggttgaccaggtaagagcaatcttgtactgttggctgtgttaaaaatgaagtgaaatcgtttcatcattcccatatgctaatgcttgtgcacatgaattatgcagatcatcatggcaaagccagcaggagggccaaggagagatgctcagcctggaatggacgaagattagtttgctaccgtgctatattttccatgtttaccgtgttctgaggtttctccgaagtagacctcttttttatcttatttataagtttggttcagtaggaagattttggtgcctggacagcacgtttgggtgggggctgcatggttgagctgattttctgcggggtatgtgtttgtgagtttgtctcggtgtattattatcatgccaatgtatcaaaatggttagctctaaaaaggatttgttctttcagatttgtatgccgaagtatcttttttctttgttgcgctgaactcttttttgttctacggtatgatgaatcacttacgct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0804800, RefSeq:Os03g0804800