Os03g0807400

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Revision as of 13:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0807400| Description = Similar to Calreticulin 2 precursor| Version = NM_001058177.1 GI:115456082 GeneID:4334509| Length = 5444 bp| Defini...")
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Gene Name

Os03g0807400

Description

Similar to Calreticulin 2 precursor

Version

NM_001058177.1 GI:115456082 GeneID:4334509

Length

5444 bp

Definition

Oryza sativa Japonica Group Os03g0807400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34594743..34600186

Sequence Coding Region

34595445..34595469,34595663..34595779,34595868..34596060,34596149..34596256,34596509..34596704

Expression

GEO Profiles:Os03g0807400

Genome Context

<gbrowseImage1> name=NC_008396:34594743..34600186 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34594743..34600186 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctaagatcagagaagacagaggacgaaaagaatttaatagtaccactcactttgctcgattgcttccaacaatgttatgccgatgaggaggattatagtgacttgctcactttgagaattgaccattttgcccctgtacatttcctgtctggaactggtatagctatagttgagataaagtgtttagctaaagatggatgggaggatcggtgggtcaaatctgagtggaagaaggaggacaacacagtcggcgagtggaaccacacggccggcaagtggaacggcgacaccaacaacaagggtatccagacatcagaggactacagattctacgccatttcggccgagtaccctgagttcagcaacaaggacaagaccctcgtgctgcagttctcggtgaagcacgagcagaagctcgactgcggcggcggctacgtgaaattgcttggcggcgatgttgaccagaagaagtttggtggcgagacaccgtacagcatcatgtttggaccagatatctgcgggtatgccaccaagaaggttcacgctatccttactaagggtgtgtttgaggagaaggagatagagaagattgggaaggtacgcaaaacgagcctaagaacggcaataaccatctga</cdnaseq>

Protein Sequence

<aaseq>MLRSEKTEDEKNLIVPLTLLDCFQQCYADEEDYSDLLTLRIDHF APVHFLSGTGIAIVEIKCLAKDGWEDRWVKSEWKKEDNTVGEWNHTAGKWNGDTNNKG IQTSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFG GETPYSIMFGPDICGYATKKVHAILTKGVFEEKEIEKIGKVRKTSLRTAITI</aaseq>

Gene Sequence

<dnaseqindica>4718..4742#4408..4524#4127..4319#3931..4038#3483..3678#gagttgaacctaacggcatgtcaattgcatgtgctatctcagcttgtgccagtttgaagttactaaaccaggcaaaggagctccatagccatgctattaaggttggcagtgttaacaacgtgctctcagggaactccttggttgacatgtatgcaaaatgtggagaaatagttgcagcttggagaatatttagtgggatacctgacaaggatatattctcctggaattcaatgatttcagggtatgcacaagcaggttattgtggcaaagcatacgagctcttctgtaagatggaaaactatggtgttcggcgcaatgtgataacctggaatacaatgatctcagggtacatacggaatggggatgatgagagagcttttgagctattccagatgatggaaagtcatggagtaaaaagggatacagcaacctggaacatactcattgctggatcagtgcataatggttattatgatagagccataagaatattccggcagatgcaggcacttctgaggaggcctgactacattaccatccttagcattattccagcattcacaaatctagttgcgtcctggaaagtacgggagatccatgcctgtatttttcaccacaatttagaactggatggcaaaattgcaaatgcacttatcaatgcatattcaaaatctggtaatcttgctagtgcgtgtgctgtgtttgatatgcattcatcaaggaacattatttcttggaactgtatcattctcgctcatgtgctgcatggttctccaaatgaagccttggatcttttctgtcaaatgaagcaagaaggtgttgtgccagatcatacaactttggtcactgttatcaaggcctatggtctcacgggaaaggtatctgaagggtctcagacatttttcaacatggccaatgattacaatataactccagaattagaccattatgcagcaatggtggatcttcttggtcggtcagggagactaaaagaagcatatgagcttattgacgagatgcctttgatacccaattcaacagtctgggacacatttcttactgcagctgtaatgcatggaaatgtaagactggctcacctggcagctagagaactgtctgcgattgatcctggagatcccagagtccaaaggttaggttctagtctgcaagatctaactggaaaaactgttgatgtgccagaggagatgacacccaacaaaggaagaaatttagatgaggtcgagagctgttcaatagaaatcaggaataaggtgtatgtgttctcaaatggtgataatgttggcttggaggatacagtagcagaattaaagtcgatgatgtttaagatgggacattctatgcttgacattggcattggaactctagatgttgaagaagaaaaggaagaagttgttggagtccattgtgagaagctagctattgcatttgggctttctaattccccacagttcaaaaacataaggataatcaaaactgcaaggatgtgtaaccattgccacacctttgccaaactagtttcagagaaatatggacgccatatactgatcaaggatccaaagtgtttgcataagtttgaggatggaaaatgctcttgtgaagattattggtgaatgatgaatacaactagtttatgtctactgggtaaaatatcttgccaagtgtccttttgcaggattacacgctgctaacctcttgaacaggtaatatccattttgtcagattcactccaggagtttccttggggttgaattttgtctgtcacatacatagtcttgttgacaggattacttatccttgtagaattcaaacacttggaggatagcctatccatcaattcaacccccagacaaaaatatccagtactatgtggtatcagaaaaggagactgttctgatgctattccagcttcagtttaggtttattttgaacggcttgggagacagtactggtggttactccattccatcattcaagaaacagtttggtaccaatcacacatcttttaccttttgttaattgttccaaatagttagcaacttagtatctcacaaatttatgcttacaatttgatcatttctattgactataaaaagaatttcacttgccattaaactgattcatcaagttgatctgcgtgttggttcacatcgggaatattaccacattgaggatggccagacaaccttgtcaaaagggacagaggtattagaaggtggatacgaaaattgactgggatggaagaactagagggataattatagactaggatggaaaaactagaggcattgagaggcagtgttaaaggattgaatatttcttcttgattgatctcgtctgatgctgatgctctgtattttctctagatttgtccctaacatagtatatcattatacatagactcttgatttctaaccaaaaaaaaagctgacattacttgtacaatttagactctaataattaaaaactatatttacactcaaaaaaatattcaagactatattctaaacttgcagactcaatttctaatttaataggaccttaatgtggcagccactgcttcttgcagctgaaatgctcctgagttttcacaaatactccctccgtcccaaaaataagtgcagttttgcactattcacgttcaacgtttaaccgttcgtcttatttgaatttttttttatgattagcatttttattgctattagatgataaaatatgaatagtcctttatgtgtgattaaatattttcaattttttcacaaatttttcaaataagatagacggtcaaacgttgggcacggatatccacgactgcacttattttgggacggaggtagtatcacttagatttattccatgtgttatgatggtttaattttttccttcatcacatgcatacatgttttctttaaaatattacataatgctacatagaaacaatcttttaataatatagtttcagcattttaacagtgtcacacagcagcatgtacttattgaaatgggatggcagctattgtagtttcttaaattttgccggcatagtttgtgtctctatctgttttgttttccttttcagggtgaaatactaataccaatttcttttgcaggttcagaagcatgaacatggcaatgtaactttgagagttatagacttgaatggaaaaaatgaaattcttcaagtggttcctatttatacactgctggagcaaataagaattatcttagtagattttaatagcaccataaacattagggatagtgaggctagaaaatctattgtccacattcattaggtccaatctaatacggaaccatcatattacattacgcttcatttgcctcccgttcgatgacacaatttgttggatttgtttgcccctctgaccaaaggaaaccacgtggaaagcgtggttatcagctaatcatgtggaaggaggggatgaacagaggagaacgaagagatgctaagatcagagaagacagaggacgaaaagaatttaatagtaccactcactttgctcgattgcttccaacaatgttatgccgatgaggaggattatagtgacttgctcactttgagaattgaccattttgcccctgtacatttcctgtctggaactggtatagctatagttgagataaagtgtttagctaaaggtacgagaactctggtacttgtttggagatctctttctttttgtggaagcaagcaattgcaaatttgtgtgtatgtgcgttctttgttaatcgaatccgatcctcttttttttttttttttgagaacttcgatcctgttgttggtaccggcattccttttcagctttgtctgaaatgtgatgtacacatatatggttttcagagaaactagaattggttggtttctgaattctgaattgtgtgtgaaaacagatggatgggaggatcggtgggtcaaatctgagtggaagaaggaggacaacacagtcggcgagtggaaccacacggccggcaagtggaacggcgacaccaacaacaagggtgaggatcgatgcacacaccacgctgctgatttcgttttttcttttctgttccggcatgtgcgaagttactctgcttctctgtgcaggtatccagacatcagaggactacagattctacgccatttcggccgagtaccctgagttcagcaacaaggacaagaccctcgtgctgcagttctcggtgaagcacgagcagaagctcgactgcggcggcggctacgtgaaattgcttggcggcgatgttgaccagaagaagtttggtggcgagacaccgtacaggtgatggtttgatcaccttgcattcccttctgtgtgctcatttcagagcgcaacatctttgattgatcggtttcttttgaaattgcagcatcatgtttggaccagatatctgcgggtatgccaccaagaaggttcacgctatccttactaagggtgtgtttgaggagaaggagatagagaagattgggaaggtacgcaaaacgaggtaagtcattagcgcatgattaattgagtattaactattttaaactttaaaaatggattaatatgattttttaaagcaactttcctatagaatttttttttttttgcaaaaaacacaccatttagtagtttgggaagcgtgcgcgcggaaaacagaaacaaactcactccctttgttctccaaacgaacgcagcctaagaacggcaataaccatctgatcaagaaggacgtgccatgcgagaccgatcaactgacacacgtctacaccttgatcatccgtcctgacgccaaatacagcattctgattgataacactgagaagcgaactggaagcatctatggtgattgtgataatcttcctccaaagaagaagaaggatcctgaagccaagaaggtaatttagagataattcactggctgttctgaataggcagtctgtgctgttctatttttacagaggtcataactaatacggtaaaatgttactgtttgcagccagaagacgggctgtgtttagttcagcacaaagtttgtattttggttgaaattggagataatgtgactgaaaagttgtgtgtgtataacaggttgatgtgatgggaaaggactgaagtttagatccaaactttggatctaaacacagcctgggacgacaaggaatcattcctgatcctgagtacgagaagcctgaggttgctttcctttgtttgcgcaactttagatgatatttctgtctgaagattaattgagtttttactaataccactctactgagtttctaaatgaaaatgggtggcagttttgtactgtatgttgtgagcttgctgctcctcagatagcaatagagtacattgtgttacaaaagcatcatgaggccatatttgatctcatcaaaggctcatcaaagagcaacaatggca</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0807400, RefSeq:Os03g0807400