Os03g0807600

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Revision as of 13:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0807600| Description = Similar to Cycloartenol-C-24-methyltransferase (EC 2.1.1.41) (24-sterol C- methyltransferase 1) (Sterol C-methyltransf...")
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Gene Name

Os03g0807600

Description

Similar to Cycloartenol-C-24-methyltransferase (EC 2.1.1.41) (24-sterol C- methyltransferase 1) (Sterol C-methyltransferase 1) (STEROL METHYLTRANSFERASE 1) (CEPHALOPOD protein)

Version

NM_001186752.1 GI:297722634 GeneID:9269350

Length

4178 bp

Definition

Oryza sativa Japonica Group Os03g0807600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34607064..34611241

Sequence Coding Region

34607064..34607133,34607285..34607382,34607554..34607679,34608083..34608283,34608615..34608698
,34608771..34608818,34608980..34609034,34609118..34609173,34609291..34609375
,34609481..34609554,34609688..34609771,34610202..34610300,34610496..34610542
,34611190..34611241

Expression

GEO Profiles:Os03g0807600

Genome Context

<gbrowseImage1> name=NC_008396:34607064..34611241 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34607064..34611241 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatgctgatccattttataaactgatcgagtcgcttctgttttacacggacatgtgggaagaacggtgcggagaggaggatgactcctcttttattactgaactgaagtataatgtcgaagacgagtgccctggatcttgcttcaggattaggagggaagatcagaaaggagcaagtcaaatcggccgtggatcagtgttccatcgtgtcaggtatgagaattatcatgaaatttatggaggtgaagtggaatcaaggacatccaactacgctgatttggcaaacaagtattatgatcttgtcaccagtttctacgaatacggctggggagaatcattccatttcggcagcagatggcaaggagaaactttacgcgaaagccttaagcgtcatgagcattttctggccttgcaactcggcctcaagaagggcatgaaggtcctagacgtggggtgtggcattggaggacccttgagagagattgccagattcagctcagcatcggtgactggactgaacaacaatgcgtaccagatatcaaggggcaaggaactcaacttttctgtcggtttgagtgaaacctgcaactttgtcaaggctgacttcatgaacatgcctatccctgatgccaccttcgacgcagcctacgccatcgaggcgacatgccatgcccctgatgctgttggtgtctacagggagatctgccgagtgctgaaaccagggcagttgttcgcgttggacgagtggtgcatgaccgacaagtatgatccaggcaactcgaggcaccggagcatcaaggccgagatcgagctcggcaatggccttccagacatcagaaccaccaaacagtgcatccaggctctcaaagacgcgggctttgaggttgtatcggtgaaggatctggcagaggattcgccgttgccatggtacctgcctcttgattccagccagttctcactcaatggcttccgtctcacccgtgtcggccgcttcatcactcacatgctggtaaagacgctcgagtgcctccatgttgccccacagggcagcctgagggtctccagctttcttgagaccgcggccgaagggcttgtgaagggcgccaaggaagggatcttcacgcccattttcttcgtcttggctcggaaacctctggacaagcagccagagatctga</cdnaseq>

Protein Sequence

<aaseq>MNADPFYKLIESLLFYTDMWEERCGEEDDSSFITELKYNVEDEC PGSCFRIRREDQKGASQIGRGSVFHRVRYENYHEIYGGEVESRTSNYADLANKYYDLV TSFYEYGWGESFHFGSRWQGETLRESLKRHEHFLALQLGLKKGMKVLDVGCGIGGPLR EIARFSSASVTGLNNNAYQISRGKELNFSVGLSETCNFVKADFMNMPIPDATFDAAYA IEATCHAPDAVGVYREICRVLKPGQLFALDEWCMTDKYDPGNSRHRSIKAEIELGNGL PDIRTTKQCIQALKDAGFEVVSVKDLAEDSPLPWYLPLDSSQFSLNGFRLTRVGRFIT HMLVKTLECLHVAPQGSLRVSSFLETAAEGLVKGAKEGIFTPIFFVLARKPLDKQPEI </aaseq>

Gene Sequence

<dnaseqindica>4109..4178#3860..3957#3563..3688#2959..3159#2544..2627#2424..2471#2208..2262#2069..2124#1867..1951#1688..1761#1471..1554#942..1040#700..746#1..52#atgaatgctgatccattttataaactgatcgagtcgcttctgttttacacgggtacgccgtgtaaaacaaatactccctccttccctaaatgtttgacaccattgatttttttaaacatgtttgaccgttcgtcttattcaaaaacttttgtaatatgtgtaaaactatatgtatacataaaaatatatttaacaataaatcaaatgatagaaaaagaattaacaattacttaaattttttgaataagacgaacggtcaaatatttttaaaaaagtcaacgacgtcaaacattttgggatggaggtagtactattttagatgctcatgggaaccacgcatctatatatacccgtacatacgctcctgaaaatgctcaaagggcaaccatatataataccttcatcttcaattcctcctgttccaggtattgttctcacctctcttagtcttatgtataacatatatactacgtgtgatgtttagaaactctatgcttttcttacatactagcaaattactcatgccatgtcatgggaaacgaattaagaccgctttgccgtgtttttttaggcaccgttttggttttgtttcctaattttttgtttttttttctaattggctagttttttgagaaaccgttcgttcttttctggaggggacgagggtaggatctgtttctaccactgaattttttgcagacatgtgggaagaacggtgcggagaggaggatgactcctcttttattgtagtagagatattagaaaaaggaatcagtaaatcagctttgattaagttaagacaacttgagttgatatgtatgcttagctttgattagtgtttagcatgcgatatcttgtgcagatcaacacacccacacacatctcaattttctctcagaaggtgtatatatatttgcagctgttgtctaatcgatctgcagactgaactgaagtataatgtcgaagacgagtgccctggatcttgcttcaggattaggagggaagatcagaaaggagcaagtcaaatcggccgtggatcagtactgcacatactttatttacccttctaatacgttaattaattatgcttgaattttatagtgatatagtaacaattaataaatttgagttaagtgcacttacggggcctacaggagattagggggggagagaagaaaatatgttttttttttaattttattatttttatatgaatgacatgtaggctccattaacacgtatgcgtcaacatggcatgtcatatcagtgcacgtagcaggttagactgttagaactcgtttgaatctggatacacctatgataaatttaggaacctatataacatatccatttaagtttagacagaccactggtgtacttcactctaacaggttttgaccaactcgccagtcgtttctcgcttcgtttatgctgcccctttgttcaacaatcacacactaaaatgttcaggtgttccatcgtgtcaggtatgagaattatcatgaaatttatggaggtgaagtggaatcaaggacatccaactacgctgatttggtacctttttagctggagtagttgtttttcataataatttgcatatagctcatgtgaaatcgatcaattgaattagcaacgagaattttggaggttataaccaaactaattagtgccaaatttaatgcatcaggcaaacaagtattatgatcttgtcaccagtttctacgaatacggctggggagaatcattccatttcggcagcaggtcatgccataattttgccacgccataattttgccactaattaagtttgtttggatgggctttaggttattctgattttgtttttcttcgctgattatctttcagatggcaaggagaaactttacgcgaaagccttaagcgtcatgagcattttctggccttgcaactcggcctcaagaagggcatgaaggtcaatgttatactactattaattacagttcaagaaaagagaataatctattaactataaatgtgattgtttctaatcttcatagtggagtcatttttccctgtgcatatattgcaggtcctagacgtggggtgtggcattggaggacccttgagagagattgccagattcaggtgacaatttcctgttgccaatttcacaaattcagagataaaaatcaagcgaactataattattccaatgctactaattatagctcagcatcggtgactggactgaacaacaatgcgtaccagatatcaaggggcaaggtaacgagttctgcattttatttaaccatgtgcatttcttttacagagttagatgtgaattatttgaaatatgttatgcatatattatcaagatgaagacatggatttttcaccatgagctagatcaacacttaaaagttaatttgatcttcattgtgcaggaactcaacttttctgtcggtttgagtgaaacctgcaactttgtcaaggtagagacatatatacatgccctccaatcaccaattcagttttaggtgacaaaagcaagaattgtcatgcaggctgacttcatgaacatgcctatccctgatgccaccttcgacgcagcctacgccatcgaggcgacatgccatgcccctgatgctgtatgcttagctcatttattttcctgtatcatatcactactcatttcgttccaaaaaaaaataaatctaaaaagggatacgatccctcatagtacaagtaacatggacagaattttgtttaagttcgttatacggatcacatctcccgcctaagtttagtattttttaggatagagaaagtatataggtaagtactattacttccgttctaaaatataactatctagataagtctaaaatatacgatattaggttgctatattttggaactgaggtactaggttggtaacatgaaaacttattatcttggtgaattaacttgtacatgtaggttggtgtctacagggagatctgccgagtgctgaaaccagggcagttgttcgcgttggacgagtggtgcatgaccgacaagtatgatccaggcaactcgaggcaccggagcatcaaggccgagatcgagctcggcaatggccttccagacatcagaaccaccaaacagtgcatccaggctctcaaagacgcgggctttgaggtgagctctactccaaatactacacatcacaacattaaaaataggagaaactcttttaatttcttgagggaagagatatctccttgtttgttcgaacaacattcaaataatcataaaaaaaatctaaaaaaatggactaacatttgtacaacatgtaactgtgatcgtttagggctagatcttaaatgagacctgaaaagagacgtccctccaaacatttatcttaaatgagatctgaagagagacgtccctccaaacatttattagtgtgagcgtattgaggattgaacacggaaccttagggttgacaccacacatccgttgtcactgcactatcaagtgcatctctttatagctagatcatcaaagatcaagatttatctttgtgatgatgtgtttgaaggttgtatcggtgaaggatctggcagaggattcgccgttgccatggtacctgcctcttgattccagccagttctcactcaatggcttccgtctcacccgtgtcggccgcttcatcactcacatgctggttcgtaacattttactgatataccatgtactccaatctagatttgtagtattatttgtgtcgaattcagttataagttactactacattttaagacggagcgagtacggaagtaaatgaattgttggtagagtgcaattgacgtcttaatttaccttcaaaaatcttcaggtaaagacgctcgagtgcctccatgttgccccacagggcagcctgagggtctccagctttcttgagaccgcggccgaagggcttgtgaagggcgccaagtaagttgatcggcctcgagcaaatctgaagcaagaaaattttgaatttgtgccgaatttatatcaatctccgaaacagtaatgctgctgaatgaatgctgcatctttttttaaacaacgctgcttaatgaagtgtgattttcatttccagggaagggatcttcacgcccattttcttcgtcttggctcggaaacctctggacaagcagccagagatctga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0807600, RefSeq:Os03g0807600