Os03g0808600

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Revision as of 13:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0808600| Description = Similar to Calcium-dependent protein kinase| Version = NM_001058187.1 GI:115456102 GeneID:4334519| Length = 4233 bp|...")
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Gene Name

Os03g0808600

Description

Similar to Calcium-dependent protein kinase

Version

NM_001058187.1 GI:115456102 GeneID:4334519

Length

4233 bp

Definition

Oryza sativa Japonica Group Os03g0808600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34656580..34660812

Sequence Coding Region

34656927..34657457,34658037..34658160,34658380..34658523,34658610..34658762,34659120..34659235
,34659400..34659567,34659661..34659891,34660376..34660525

Expression

GEO Profiles:Os03g0808600

Genome Context

<gbrowseImage1> name=NC_008396:34656580..34660812 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34656580..34660812 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaactgctgcggcacgccggcgacggcggaggagggcgggaagaggaggaggagggggaagcagaagaaggcgaaccccttcaccgtcgcgtacaaccgcgcgccgtcgtcggcgggggcggcggcggggaggcccgggctgatggtgctgcgggacccgacggggcgggacctcggcgcgcggtacgagctcggcggcgagctggggcgcggcgagttcgggatcacgtacctgtgcacggaggcggagacgggggacaggtacgcgtgcaagtcgatatcgaagcggaagctgcggacgccggtggacgtggaggacgtgcggcgcgaggtggagatcatgcgccacatgccgtcgcatccgaacatcgtcagcctccgcgccgcctacgaggacgaggacaacgtgcacctcgtcatggagctctgcgagggcggcgagctcttcgacaggatcgtcgcgcggggccactacaccgagcgcgccgccgccgccgtcacgcgcaccatcgtcgaggtggttcagatgtgccacaggcatggtgtcatgcaccgcgaccttaaaccagaaaacttcctatatgctaacaagaaggatagttctcctctgaaggcaattgattttgggctatctgtgttcttcaggcctggtgagcggttcactgaaattgtaggcagtccatattacatggctccagaggttttaaagcgacactatggccctgaagttgatgtctggagtgcaggagtgatactttacatacttctttgcggtgtaccaccattttgggcagaaaccgagcagggagtagcgcaggcaattatacgctctgtggtagatttcaaaagagaaccatggcccagggtatctgagccagctaaagatcttgttaagcggatgttggacccaaatcccatgacaaggcttactgcagaacaagtacttgaacatccatggttacatgattctaaaaagatgcctgacattcctcttggtgatgctgtccgagctagactgcagcaatttgctgcgatgaacaagttaaagaagaaagcccttaaggtcattgctgagcatttgtctgcagaggaagcagctgacataaaggacatgtttgataaaatggatgtgagcaagaatggccagctgacctttgaggatttcaaggctggcatacgtaaacttgggaatcagatgcctgattcagatcttaagatattgatggatgctgctgatattgacaaaaatgggatcctggactatcaagaatttgttgctgtgtctatccatgtgaggaaaataggcaatgatgaacatatccagaaggctttctcatattttgaccaaaataagagtggttacatagaaattgaagagcttagagaggccttggttgatgaaatagatggcaatgatgaagacattattaatagcatcatccgtgatgtagatacagacaaggatgggaaaataagctacgacgagtttgccgtcatgatgaaggccggcactgactggaggaaggcatctaggcagtactcaagacaaaggttcagtaacctcagtctgaagcttcaaaaggacggatccatcagtgacgacacgcaatag</cdnaseq>

Protein Sequence

<aaseq>MGNCCGTPATAEEGGKRRRRGKQKKANPFTVAYNRAPSSAGAAA GRPGLMVLRDPTGRDLGARYELGGELGRGEFGITYLCTEAETGDRYACKSISKRKLRT PVDVEDVRREVEIMRHMPSHPNIVSLRAAYEDEDNVHLVMELCEGGELFDRIVARGHY TERAAAAVTRTIVEVVQMCHRHGVMHRDLKPENFLYANKKDSSPLKAIDFGLSVFFRP GERFTEIVGSPYYMAPEVLKRHYGPEVDVWSAGVILYILLCGVPPFWAETEQGVAQAI IRSVVDFKREPWPRVSEPAKDLVKRMLDPNPMTRLTAEQVLEHPWLHDSKKMPDIPLG DAVRARLQQFAAMNKLKKKALKVIAEHLSAEEAADIKDMFDKMDVSKNGQLTFEDFKA GIRKLGNQMPDSDLKILMDAADIDKNGILDYQEFVAVSIHVRKIGNDEHIQKAFSYFD QNKSGYIEIEELREALVDEIDGNDEDIINSIIRDVDTDKDGKISYDEFAVMMKAGTDW RKASRQYSRQRFSNLSLKLQKDGSISDDTQ</aaseq>

Gene Sequence

<dnaseqindica>348..878#1458..1581#1801..1944#2031..2183#2541..2656#2821..2988#3082..3312#3797..3946#atctatctgtaccggattatcctaatcgcgtttactaaactccgctaaaatctcttgtattcccacaaaatttccccaaaattttttactaaaacttttttctcaagatagaaaaaactatatatccttttggtttgcaaaggttttactaggttatttgcccccctcttctagaacgcatccagaattcgtggactctgcgacccaactcacacggcgaagcacacagaattttttttcccaaatccatttattttcctctcttctctctctcgaatcgaatcgaatcgcctcgcctcctttgttgaattgaatccaagctcgattcgccgccgccgcacgccgccatgggcaactgctgcggcacgccggcgacggcggaggagggcgggaagaggaggaggagggggaagcagaagaaggcgaaccccttcaccgtcgcgtacaaccgcgcgccgtcgtcggcgggggcggcggcggggaggcccgggctgatggtgctgcgggacccgacggggcgggacctcggcgcgcggtacgagctcggcggcgagctggggcgcggcgagttcgggatcacgtacctgtgcacggaggcggagacgggggacaggtacgcgtgcaagtcgatatcgaagcggaagctgcggacgccggtggacgtggaggacgtgcggcgcgaggtggagatcatgcgccacatgccgtcgcatccgaacatcgtcagcctccgcgccgcctacgaggacgaggacaacgtgcacctcgtcatggagctctgcgagggcggcgagctcttcgacaggatcgtcgcgcggggccactacaccgagcgcgccgccgccgccgtcacgcgcaccatcgtcgaggtggttcaggtgaacgcgtgtctccgtgtggactgtggactggacagagtcctgttctatttttttttaccttgttatttgcttaattaatttctagcatctgttgttatgttcgtaaataaatttggttcagatgagagaaattggtggttatgcctcaaataggataattgctactactagctgttatgttcatgaattggccatgatctggtcttttatgtagtgaggaattagaaatcatggtagcatccaactgggtatctggtaagattctgagcaaaatttaattgttgaatttgctagggttcaacagtctgttaaaccttggtgcttgttagagtcacccatcattgtttagccagagtgataatgtattgacaaaggagtccatgtactagtgaagcgcattttgtactgcgagtatggtatattttggcagcagttctatttgtaaacgtataatcacgctgattctagaatgtatgctagcagttcttcatcatgtgcttttcatattaagttcttgctatattggacttgcttttgtgacatctgacatgtattgttgtcctctctactgaacagatgtgccacaggcatggtgtcatgcaccgcgaccttaaaccagaaaacttcctatatgctaacaagaaggatagttctcctctgaaggcaattgattttgggctatctgtgttcttcaggcctggtatgctctgcagactgatgctcaagtacataactttagaataaatggaactgaatctattgtacttggacaaaacaagtagaagaagagcaaatgggattgccccattgtactttgcttcaattcactgcaaatggagcttacttcataggcacatgcagcattcttttcagcaaaactgaatgcttgttgatttctaatgatggattcaatatgcaggtgagcggttcactgaaattgtaggcagtccatattacatggctccagaggttttaaagcgacactatggccctgaagttgatgtctggagtgcaggagtgatactttacatacttctttgcggtgtaccaccattttgggcaggtgtgttctttctcttgactagactgcatgtgttgcggggaagttatagaacaccattcttatcatattattgtggtgccatgcagaaaccgagcagggagtagcgcaggcaattatacgctctgtggtagatttcaaaagagaaccatggcccagggtatctgagccagctaaagatcttgttaagcggatgttggacccaaatcccatgacaaggcttactgcagaacaagtacttggtaagcatcgccaatcacctgtcctaacgcgtagcagcatacataatgctatctcactcctactttagtggaatatatgaaggatatgtctgtactatatattatctatgatgtgattgatgagtaatgaactcacattattataagaagatataaaattagcccagggctatttattattcagggaccatcatgcagggctaatctcagaaaagttctccgaaaaatggctagctgtacccttttttttactgtgtttttatccagaatgttttttaatggcaccatgattaacatttttcatggctcagacatttttttctcattgtttttctctgattttcgttgcatgtacagaacatccatggttacatgattctaaaaagatgcctgacattcctcttggtgatgctgtccgagctagactgcagcaatttgctgcgatgaacaagttaaagaagaaagcccttaaggtagcatttataatatgttagcaccaaaatagattattattcttattgaataaaaacttctacatagagatcacatataatttgcttcctaaattctaaacacgagatgtgcataaggatttttctccttttcttgtagttagcttatttgtgcttaattgcaggtcattgctgagcatttgtctgcagaggaagcagctgacataaaggacatgtttgataaaatggatgtgagcaagaatggccagctgacctttgaggatttcaaggctggcatacgtaaacttgggaatcagatgcctgattcagatcttaagatattgatggatgctgtgagttatcattaaaaatggtctaaactagaataaaaaggactggttctggttcttggcgatacatattgatgttcgctcattgctttgcaggctgatattgacaaaaatgggatcctggactatcaagaatttgttgctgtgtctatccatgtgaggaaaataggcaatgatgaacatatccagaaggctttctcatattttgaccaaaataagagtggttacatagaaattgaagagcttagagaggccttggttgatgaaatagatggcaatgatgaagacattattaatagcatcatccgtgatgtagatacagacaaggtcagcttaatctttccttagcaggccattatattgcatgacattgttcttggtatctatgcaatgacttcaattatataaaagttataagcccacagctagtgaaatctatgaatatcatttgctagaagctgaatagtgccacatacttgattacctggtagccagggttcaaatgtttctacctttggctgcaaggcagggtttatttaattaaagggttggtgaatgttatcattgacctatactatcatataataagttgtaaccggatggacaaggatagtctaattagacgacataaaacaaatgacataacaaacaaacaactggggtaggcttactggagatgattctagtgcaattgttagttgaaagtaacattagcaaagtatgacctgttcaaattccgtgtgattgaacttgtcgatatggtcatcctaacaacaatgcaatgttttcttttcatttattcttttctcaggatgggaaaataagctacgacgagtttgccgtcatgatgaaggccggcactgactggaggaaggcatctaggcagtactcaagacaaaggttcagtaacctcagtctgaagcttcaaaaggacggatccatcagtgacgacacgcaatagactggacagagaaaaaaactacgcttacgttttttctttgctgtgtgctggctgttacattattttttcacacagtaacttagtggctttgtatagatagcatttgtggttttgtgcttaccagcagcgattatatttgtcagtcaggcggcagatatgtatgtacccaaaagagggcgggatggggaagcagatggtgtgcttacagtttactagaccagaattattggtacaattgtttgtagttttgtacgtaccataatacaagcggcgtgaaattctcaact</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0808600, RefSeq:Os03g0808600