Os03g0809900

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Revision as of 13:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0809900| Description = Similar to RNA-binding protein 8A (Tsunagi protein)| Version = NM_001058196.1 GI:115456120 GeneID:4334528| Length = ...")
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Gene Name

Os03g0809900

Description

Similar to RNA-binding protein 8A (Tsunagi protein)

Version

NM_001058196.1 GI:115456120 GeneID:4334528

Length

4813 bp

Definition

Oryza sativa Japonica Group Os03g0809900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34745542..34750354

Sequence Coding Region

34745598..34745853,34746947..34747083,34748433..34748575,34749970..34750027

Expression

GEO Profiles:Os03g0809900

Genome Context

<gbrowseImage1> name=NC_008396:34745542..34750354 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34745542..34750354 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggaggacgtggagttcgtcgactacgaccgcgacgaggaggaggaggaggacgccatggacgaggacgatcggggcggtggccgcggcgggcgcgcgctacccgtaccccacatcgtctcccagggcgtgatgcgctcgcgcggccgcctcctcggccgcagcacctccgtgctcgcctccaaccgcgaccgcttcgactccctcgccgatgccggcaaccccggccacggcccacagcgctctattgaaggatggatactactggtctctggagtcaaagaagacgcggaagaagatgatctgtacaacactttcagtgattttggtcatgttaaggacctacatttaaatctggaacgccgcactggatatgccaagggatatgcattagttgaatatgaaagttttgaggaagcacaaactgcaatcaaagcaatgaatgggactcagctgttaacaaggactgtctatgttgactgggcattcagcagaggtcctatacagaaactcaccagtacaaggccattacatcggcgatctcggactccacctcgcaggcttgctgccttgacatgttga</cdnaseq>

Protein Sequence

<aaseq>MAAAAEDVEFVDYDRDEEEEEDAMDEDDRGGGRGGRALPVPHIV SQGVMRSRGRLLGRSTSVLASNRDRFDSLADAGNPGHGPQRSIEGWILLVSGVKEDAE EDDLYNTFSDFGHVKDLHLNLERRTGYAKGYALVEYESFEEAQTAIKAMNGTQLLTRT VYVDWAFSRGPIQKLTSTRPLHRRSRTPPRRLAALTC</aaseq>

Gene Sequence

<dnaseqindica>57..312#1406..1542#2892..3034#4429..4486#ggcgcaaacagtacacgctctcctcctcctcctcgctgtctcccactcccatcccaatggcggcggcggcggaggacgtggagttcgtcgactacgaccgcgacgaggaggaggaggaggacgccatggacgaggacgatcggggcggtggccgcggcgggcgcgcgctacccgtaccccacatcgtctcccagggcgtgatgcgctcgcgcggccgcctcctcggccgcagcacctccgtgctcgcctccaaccgcgaccgcttcgactccctcgccgatgccggcaaccccggccacggcccacagcgctgtgagatctccctttgtacttctattttttttttgggcgtgagctcgagtttgaacttctcggtagggttttgtgcgctatttttggtcggtttgcgtgtgatttaccagttagtgtcgcgcataatccgcgagggatttggtgagctaggatttgtttggtgatatttggctagggtttagggtttttggtacggctgcgcttgcggcttgccgattgccactcgattgcgtgcgcactcctgtttgtggtgcaggcttttgattttattcaggggaattggagccatgtgatgcttaagctaacgatccaaactaaatcgctgccggtggacagttatatgctgatatggttgtgggaaaaaaaaacaaatgtataattgcaattgatactgattttgtggtcctgaatgctgagaaccacatcaggttctacgctgattgagtgagtttccatgctgacaagtgacaactactaccatcagtagaatgattgtataattttgcacgctgtgatctttcgttcttctgtaggtttcgtagttgtgtgcctttggcaggcatgccttttctccccaatgtccttgatggcgttggaggaaattagaccattgtattgaaagttacttgggacaaaaaaaattcattgcagcgaatgcatgacatcaattagtttgagcagcaccatgagatgcagttaaaaggtagtataaaaactgcgggatgattcgcaatgactgatgcaaattcataataacttggttctgtcttctgtactgcgtgttcagtgatatggtagcccaggtagctacttgcatgataaggttccatcgtggtatactagaaacaccaaatgtacttaacgagatgacttttgagagagaacaatgaaatgttgcaattgagctgtgatgctgagggttatcataagaatatgtttggtatctgtctcaataaaacacactgtcacatgccagtactggttctgcattcttattcgctttcattcttaaagctacttgtttttcattggcagcgataatcattaatcaattgtcacgcttgttttaatggagagttttgctgaattgtagctattgaaggatggatactactggtctctggagtcaaagaagacgcggaagaagatgatctgtacaacactttcagtgattttggtcatgttaaggacctacatttaaatctggaacgccgcactggatatgccaaggtaaaattgatatttattccaacaggcagcaattcaatacaaactgctaatgcgcagcaaccactgtggttatacataacattataggagtatttactactggcctatataggcttcttaaggtctgtttgggacctatgtgcattgtagtttcttttccatgcagcttctggcagtgagggcttcccatattcagttaattaatctgaagggcatggtgtgtttgatatgctgaatgtaattccttgaataataaagcttctgtgttaattcaacttagcacaaccaccttaaatttactttcaaccatattctctttcgctaacgactctgtcagtattccttggagtttgggtgactatttatatcctgtctctgcatcatcattttccttttttatttgcaggaatatttcttgagggactgctatgagaatagttgaaaatttgatttatgctgtttagaaaccttcttaatcgaaatcatatcaaatgatgttctctgagtttcataaatggccactcactttcttcaaccacattgcttagcttgtttggattgattattcatcttgtttctcctattttttatgtgatataattctcaactttgatttagcatggtaaaagttggattacacattttgtaattgaccaacatgagtgtattgctcaagtcattttacttgattacatcaagaagatattagtttattctgataaaactgcacccatactaatctaaggtctctggatgacttatataagagaatctaataatgggggcaatcttggagcacatggtgttagaagtcatgtacctgatgtgaaattagattttccttctactgtgataatttagagaaatgtctattttcatattaagtcaagaatatgcactagtttggttctgccagaatgctatattctggtacaatatggctagtttaccccagagtacacatcatttaacattcttacagaaaataaatggtttatgcaccacggtgtgtttacatggtaagggttaagaggggtgttgggacttccaattatttcgtattgtttactgtttgaaatgatttgatggctttcatgatgccctgatactagtttcatttcccaaatactttgcatccaactggtgtccatctcctgatacacgatccaacttatcaacgtttttatctccaaaatttcgtggatccaagactatttagtgtatgcctagcacatttatagatctaagtgaaaaacactgtttttggattagttgtatatggaaatatctatgtttctttctcacagagctatctgatttctgttcacatctgttcttctgtctaacagggatatgcattagttgaatatgaaagttttgaggaagcacaaactgcaatcaaagcaatgaatgggactcagctgttaacaaggactgtctatgttgactgggcattcagcagaggtcctatacagaaactcaccagtacaaggtgtgttattaaccatgcttttatcttttgcatttgctgggataggtgatttgttgtgttacactggcatagggtttcatttactccacaatctcatcaccaaacaatgtcttgttcttttttctgtttgttcggaatctaaaattctaaatctaaatttcctggcaattgccctttcgtgaaatcttgcatgcaagatctgtaactgtaacatattgtttcatattcagtggctattttttccctatcctagtggcctgtttatttggtttggtttgatctgggatttgcataagcagttcatccagacttgtggaattttgacataattagactcgtgtaaacctgttaacctggaagacattacctatgtttcatactccctccgtcctaaattagatgtcgttttgactttttgcttgcaacgtttgaccattcgttttattttaaaaattattgtaaatataaaaaaggataagtcatatttaaagtacttttgataataaagcaagtcaaaaacaaaataaataataatttcataatcttttgaataagacgaatggtcaaaagttacaagcaaaaactcaaaatgacaactattttgggacggaggtagtaagtttttttctgcagaaggtccagtgtttgtgaactcagactatcacatctgatctaggttgagtgttaactttattcgatctttggtgtgcaacttcaaccactatttttctattataatataatgataatatctaataaaattataatattgtaaaagtacttataaagtagtaaagtatacctatatgttttctacgctttcaaactatatatttttagagatgatggtcaaagtttcaaaagtttgaccgaataaagtcaacaatatcatatatttaaatacggagggagtactaaatagtccatcacctctagctctattgctgtatttccaaattccaactacttcgataaattgatggtggaaacaagtagtttatatttgtgggagcagaagtgtttttgttctcttagttccgtgattatgagtaaaccgcaaatgataattcactgtttcaataaccagtctgaggtaatgatatctgagaagaaacaaagtgagtccaaactctgacctatttcttgtgaactcctactacgtacagtattagacagtagcgttgaggaagcgttatctgagcctgatctaaactgcagctagtgcaatgccccattctctagacgtggaacttctgtcttaataatcctctggattaattgagtgcagatttgtattgtgtaacaggaattcagatatggtgctgaccacttctggctagaaattttatactcttactctgtttaacctgctgactagtttgtctccctgacaggccattacatcggcgatctcggactccacctcgcaggcttgctgccttgacatgttgactgggagctactatgtccgcaatcctgaatgttctcggtctgtgttttttgatagatggtacgaacgtagtcttaaccgatgtatggtgtgatatatcttccagatccagcccccctgagtcttgattctgctatccttatatatctgcactaagtttgatcaactttgtttgttgaactatgttctcggttgctggcctgtggtagaggctgttgtactgactgagtacgctagctagaaggtatattgtgtagtgatgacgttgagatggaagtgtctgccgacttaaaagcctactactacattttaaggaaaacaactttcgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0809900, RefSeq:Os03g0809900