Os03g0810600

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Revision as of 13:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0810600| Description = Ras GTPase family protein| Version = NM_001058200.1 GI:115456128 GeneID:4334534| Length = 6233 bp| Definition = Ory...")
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Gene Name

Os03g0810600

Description

Ras GTPase family protein

Version

NM_001058200.1 GI:115456128 GeneID:4334534

Length

6233 bp

Definition

Oryza sativa Japonica Group Os03g0810600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34778345..34784577

Sequence Coding Region

34778710..34778783,34779113..34779299,34780090..34780240,34780667..34780779,34781169..34781232
,34781327..34781538,34781687..34781768,34781958..34782013,34782151..34782219
,34782671..34782919,34783020..34783196,34783703..34783849,34783941..34784073
,34784240..34784454

Expression

GEO Profiles:Os03g0810600

Genome Context

<gbrowseImage1> name=NC_008396:34778345..34784577 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34778345..34784577 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggctgcggcgacagcggcgaacctggccggcaagcagggcgtgcgggtcgtcgtcatcggcgaccctggcaccggcaagtccagcctcgtcgtctccgtcgccaccgaggccttcccggagaacgtcccccgcgtcatgccgcccacccgcctccccgccgactacttccccgaccgcgtcccaatcaccatcgtcgacacctcctccagcccggagcacagggcgaagctgatcgccgagtgccaggcggcggacgcggtggtgctcacgtacgcctgcgataggcccgccacgctggagcggctcagcacattctggctccccgagctccgccgcctccagttaaaggcacctgtgattgtcgtggggtgtaagctggaccttagggacgagcagcaggtcagccttgagcaggtgatggcgcccatcatgcagacattcagagagatcgagacctgcattgagtgctctgcgcttcgccagatccaggttcccgaggtcttctactatgcccagaaggcggtgcttcacccaacagcacctctatttgatcaagaggcgcaatctctaaagccacggtgtgtgagggctttgaagcggatttttattctatgtgaccatgacagggatggagcactcagtgatgtggagctcaatgactttcaggtcaaatgcttcaatgctcctctccagcctactgaaattgcaggcgtgaagagagtggttcaagagaagatgcctgaaggcgtgaatgacaatggccttaccttgactggattcctttttcttcatgctctttttattgagaaaggacgactagaaactacatggactgtcctaaggaagtttggttatgataatgaaatcaagcttagagatgaccttattccaacaattaaacgagcgcccgatcaaaccctggagttgacaggtcaagccattgatttcttgagaggaattttcaatatgtttgacacagataatgatgatgctttgctacctgctgagctggatgatcttttttccactgcacctgaaaacccatggtctaataatccatatgtggactgtgctgaaaggaatgtcttgggtgggttgtcccttgaaggatttctctccaagtgggctcttatgacacttctagatccagcaaatagttttgccaaccttatatatgttggctattcgggtgattttggctcagcatttaccactatgaggaaaagacgagttgatcgtaaaaagcagcaaacgcaacggaatgttttccagtgctatgtttttggtcccaggggtgctggaaagacagcattgctacaatcattccttggaaggcaaccttctgatgctctgcctatgaatggtgaacggtttgcagcaaatactgttgaactatctgggtccagaaagacacttgtatttcgagagattcctgaagatgatgtcagaccattactggctgatagggaatccttggcaccctgtgatgtagcagtattcgtttatgatagctgtgatgaattttcttggcaaagaacaagggatttgcttgtggaagtggctacacatggagaaaatactggctatgaagttccttgtctgattgttgctgctaaggatgatcttgaccaatctccattggctctgcaggaatcaacgagagtgagccaagacatgggaatcgaaatgccaattcctattagcgtgaggttgagagatttgaacaatattttctgtagaatagtccatgctgcgcagcagcctcatctgagcattccagagactgaagctgggaaaacacgcagacaataccgtcaacttctgaaccgttcccttatggttgtctcagttggagctgccgttgcagttgtgggaatagctgcttaccgagtctatgcagctaggaagaacacatcgtcttga</cdnaseq>

Protein Sequence

<aaseq>MAAAATAANLAGKQGVRVVVIGDPGTGKSSLVVSVATEAFPENV PRVMPPTRLPADYFPDRVPITIVDTSSSPEHRAKLIAECQAADAVVLTYACDRPATLE RLSTFWLPELRRLQLKAPVIVVGCKLDLRDEQQVSLEQVMAPIMQTFREIETCIECSA LRQIQVPEVFYYAQKAVLHPTAPLFDQEAQSLKPRCVRALKRIFILCDHDRDGALSDV ELNDFQVKCFNAPLQPTEIAGVKRVVQEKMPEGVNDNGLTLTGFLFLHALFIEKGRLE TTWTVLRKFGYDNEIKLRDDLIPTIKRAPDQTLELTGQAIDFLRGIFNMFDTDNDDAL LPAELDDLFSTAPENPWSNNPYVDCAERNVLGGLSLEGFLSKWALMTLLDPANSFANL IYVGYSGDFGSAFTTMRKRRVDRKKQQTQRNVFQCYVFGPRGAGKTALLQSFLGRQPS DALPMNGERFAANTVELSGSRKTLVFREIPEDDVRPLLADRESLAPCDVAVFVYDSCD EFSWQRTRDLLVEVATHGENTGYEVPCLIVAAKDDLDQSPLALQESTRVSQDMGIEMP IPISVRLRDLNNIFCRIVHAAQQPHLSIPETEAGKTRRQYRQLLNRSLMVVSVGAAVA VVGIAAYRVYAARKNTSS</aaseq>

Gene Sequence

<dnaseqindica>5795..5868#5279..5465#4338..4488#3799..3911#3346..3409#3040..3251#2810..2891#2565..2620#2359..2427#1659..1907#1382..1558#729..875#505..637#124..338#gcctcctccccaccccccacccccgcgcgacgccacgccacgccaccactcgccgcagcgccgcgcccaaatcccccaaaaccctagcgcggcgagcggagggagagagagaggaggcgcgccatggcggctgcggcgacagcggcgaacctggccggcaagcagggcgtgcgggtcgtcgtcatcggcgaccctggcaccggcaagtccagcctcgtcgtctccgtcgccaccgaggccttcccggagaacgtcccccgcgtcatgccgcccacccgcctccccgccgactacttccccgaccgcgtcccaatcaccatcgtcgacacctcctccaggtccgctcacctccctcgcgctagatcgcgccgcggcccgcgatgaatcgggggtgttcccttagtcggtagatttgtggatggactccgttgcgattttggccttgttcgtctcggtgattgattccatttctgtgtggttgattccatttctgtgtggatgcagcccggagcacagggcgaagctgatcgccgagtgccaggcggcggacgcggtggtgctcacgtacgcctgcgataggcccgccacgctggagcggctcagcacattctggctccccgagctccgccgcctccaggttcgtggcgtaggatttggatcggtcgtaatgggtggtttcatgggcggtccgatgtgatctcgtgttgcttgctgtttgcctatcacagttaaaggcacctgtgattgtcgtggggtgtaagctggaccttagggacgagcagcaggtcagccttgagcaggtgatggcgcccatcatgcagacattcagagagatcgagacctgcattgagtgctctgcgcttcgccagatccaggttaaatgcgtgcactcaatagttctttgttgattacaacttgttggtcaatctgaattgggcatgctcaaaatactagcccaattgccatccttttgttgattacaacttgttggtcaatctgaattgggcatgctcaaaatactagcccaattgccatccttttatggttgactacatagtccataaccagatccttatgttgttttattctgaaaataaatttagggcatgtttatatgatgggttatgagatatgagattgggaaatggaaatgagtggatggttaagatgaaatgtggtggcaaaaactgatggctaagattgaaaattatcctttgaatggtgggatacaatttcccaaacccataaaaaatgcccttagttgatcatgcatctattgtactatgcacttgataatcttaattggtgccctactaagatagaattccagatattgtgctaggtttgggttaactagaatataatttatgaatgctttcaggttcccgaggtcttctactatgcccagaaggcggtgcttcacccaacagcacctctatttgatcaagaggcgcaatctctaaagccacggtgtgtgagggctttgaagcggatttttattctatgtgaccatgacagggatggagcactcagtgatgtggagctcaatgactttcaggtttgtattcacttagtctaccttgctttctgctctagtgctttttattgccattctgttatttatggtgttgattagaacctcttctggtgctttataggtcaaatgcttcaatgctcctctccagcctactgaaattgcaggcgtgaagagagtggttcaagagaagatgcctgaaggcgtgaatgacaatggccttaccttgactggattcctttttcttcatgctctttttattgagaaaggacgactagaaactacatggactgtcctaaggaagtttggttatgataatgaaatcaagcttagagatgaccttattccaacaattaaacgagcgcccgatcaagtaatgtgttgctcagtgcttttactattcaaattttatttcatgttgaagctagttatttttatatgtgcttttttgttatgtatgctgtttagtacccatgatatgcgagttgctgttccttcatatattaaaactgcctgtcagatgtttcttcaaccatagtgttctctatagcattactattccagcaagtgcagaaattgctcttttggtgttctgtttgttcttttgtttcttgcaatgtttgatatcttcattgctaacattactaggttactactgtagtagaatagctctactcttaggaaccactaaggcagtttcttgaattgttgattccaatagtatgttggttgttgtttaacatcagcaagcatttatctgcggtatttatcatacttactttttatataaaatttagtgtcaatatcaacttttctccttacagaccctggagttgacaggtcaagccattgatttcttgagaggaattttcaatatgtttgacacagataatgtaagtttaacgcattggtgcacagttattttactgtaatgtgaatgctagtcaacttcttttttctggtagttttattttactgaaaatcatggtttttattgatcaattgaaaatgctttttgcatcatgtctaggatgatgctttgctacctgctgagctggatgatcttttttccactgcacctgaaaagtaagttgatggaaggttcctgtcctgttttgggttgacgctgtaattgtaaagtaaatggttatcattatagaatatcgataataaaaaatgtcatgtaaccctgtattcatatttcctagagaatttaatggaatgcattttatatgcttgcattttcttactgatactcttttcttgatatttcagcccatggtctaataatccatatgtggactgtgctgaaaggaatgtcttgggtgggttgtcccttgaaggatttctctccaaggtagtctctcaaactaagcatgctgctatgctgataacactgtgtcaattgcagcgatagcactatctagaactaagcatgctgcattggtgttagattttcttattatactatcttcctttgttgatgaactattctgcaattgcagtgggctcttatgacacttctagatccagcaaatagttttgccaaccttatatatgttggctattcgggtgattttggctcagcatttaccactatgaggaaaagacgagttgatcgtaaaaagcagcaaacgcaacggaatgttttccagtgctatgtttttggtcccaggggtgctggaaagacagcattgctacaatcattccttggaaggtgctctatgcatttcttagtatcttacactatgtgctttatatctttattaccatgtttatttcttaccatttgcttgcggtccctgttccaggcaaccttctgatgctctgcctatgaatggtgaacggtttgcagcaaatactgttgaactatctgtaagtggttatgagttcttccaacatattgaaacattctgataaattctcttataagagtgcaaaatttgcttgcttgcaaatttaaaaatgttctatgatatattcacttcgttctttatgaaacatagtactggccaacataccatgtgaaaaaaaatattgcattttgatggcaacagacaggaatcttaatggcctatcagaaattactttcaacgatagttttttgacagaaaaaatgttagcagtactagtacatcagtcgcaaacattgtcatttccaatattagcatatttaaatattcgcagtttggctatttattgtttgctatttatgggttatttttaaacatttggtctgattaaataattttatttttctgaaggggtccagaaagacacttgtatttcgagagattcctgaagatgatgtcagaccattactggctgatagggaatccttggcaccctgtgatgtagcagtattcgtttatgataggtatgaattctgccaaattgttctatttatttatgaccaagaaatcctcagtgcattgtctgaagtaactggattctttacctattagctgtagcaactcaacttttttatagacatgggttgaattagtctggacaatgaactatttctacacacatcatggttttggagagttgtaaggaccgatgtttgttagctctattagctttgctccagacagttgacaattcaggatgatttttttaaataatattaaaaaggtgatagaaaatataatatgacaggcaatctattatattttctggaatgaagcaatctcaaaagctacacacaacagcaatgttgctcttgtttccggatatatctttttatgcaaattgtatataattttctgtacactaaatgttatgcctgtttaaatggcagctgtgatgaattttcttggcaaagaacaagggatttgcttgtggaagtggctacacatggagaaaatactggctatgaagttccttgtctgattgttgctgctaaggatgatcttgaccaatctccattggctctgcaggaatcaacgagagtaagcttactacatgttcgttattgatttgtcatttttactctgaaaatcatttgccactgttctgtgtcatagttggcactaaaatatttgatttttcttgcccagacatttgaattggataacaggtagttttggaagctgtttccctttacattttgatcactattttatgaatgccggagatatagtattacttaccgctatgcttctactatttttttcatacactgtagttctatattcaagcaacaatgcatgtttgattctgctgccatgcagcatactccctccatctcaaaaagcaaacctagtacagtagtacgggatgtgacacatcctagaacgctgtccagattcgtcgtgttaggatgtgtcacatcctatactaggtttatttgttttgcgatggagggagtaactcccaataacagtggtgttgttccaagtcaaggaacaacagtttggagaagagctaggaaatcttctaggatagaagtttttagccttactgcaattatttcttatgcaaatcaattgcaatatgatcttatagattcctattgtgcaaatatctagtcctgctgcaagaactttaaatgggtgtttcttcagaaatatttattgttactggctttgttttttaatttattgttactggcttttttttttgtgatgtatatgcaagtgattctctcaactttgcttagctcactgttctctgtgcaactatggattacttttagtcgtctttctatggttaattaacaacaaaattatgtactttcaggtgagccaagacatgggaatcgaaatgccaattcctattagcgtgaggttgagagatttgaacaatattttctgtagaatagtccatgctgcgcagcagcctcatctgagcattccagagactgaagctgggaaaacacgcagacaataccgtcaacttctgaaccgttcccttatggttgtctcaggtaaagccagttccacactcgacagtcctgttgtgtttactctcgtcgcatttacgctcttatactgcattgtattgtacaaatatattctataaatctataatagcaagaagtctggtattagtatagcaatagatatacctgttcaacaaggctactagaaagttcatgacaatatgaaagaagaggtttacgtaaaggtttattgttgtcagtctagcaacatgtgcacagtcgatcatgattttataagttatttccaaaactataaaatagtgtaaatttccttcgagttctaactcaactgatactgtactaataatttgcagttggagctgccgttgcagttgtgggaatagctgcttaccgagtctatgcagctaggaagaacacatcgtcttgaagctctcctggacagtgctgaaataaagtgctttcctcctttcactgcccatcaaccggatcttttcagataattttttacttctgagcttcataacgtgaaactttgtccagagaacccttttatgtacagatgtgttttcagcaatcaatcgttctgcgtattggatttcgcattttgcggctataattatgtagctgataaactgctatgactaaactagctctggcaaaacattagtactgccgtacaattttgttcttttagcaaatgtgctgttactatatcatgtctcggttctttttttaattaatggccctggattcttttggcattgagaatgatatgtcagattgtctttttac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0810600, RefSeq:Os03g0810600