Os03g0810800

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Revision as of 13:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0810800| Description = Similar to Short-chain alcohol dehydrogenase| Version = NM_001058201.1 GI:115456130 GeneID:4334535| Length = 2326 bp...")
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Gene Name

Os03g0810800

Description

Similar to Short-chain alcohol dehydrogenase

Version

NM_001058201.1 GI:115456130 GeneID:4334535

Length

2326 bp

Definition

Oryza sativa Japonica Group Os03g0810800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34789731..34792056

Sequence Coding Region

34789851..34789894,34791052..34791853

Expression

GEO Profiles:Os03g0810800

Genome Context

<gbrowseImage1> name=NC_008396:34789731..34792056 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34789731..34792056 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccgccgccgccgccgccgccgcatcctcccccgctccccggttggaaagcaaggttgcgctggttaccggtggtgcttcaggtattggtgaagcaattgttcgcctctttagagagcatggtgcaaaggtatgtattgcagatatccaagatgaagcaggtcagaagctccgggactcccttggaggtgaccaagatgtcttatttgtccactgcgatgtttcggtggaagaggatgtagcccgagcggtcgatgcaacagctgaaaagtttggtactcttgacatcatggtcaacaatgctggctttacaggccagaaaatcacagatatccgaaacatcgacttttctgaagtcaggaaggtaatcgacatcaatttagttggtgtattccacgggatgaaacacgcagcgcgcatcatgatccccaataagaaggggtccatcatctcattgggaagtgtttctagtgtcattggagggttgggacctcattcatacacagcaaccaagcatgctgtggtgggtctaaccaagaatgtagctggggaattggggaagcatgggatacgcgtgaactgcgtatctccctatgcagtgcccacggctctctccatgccgtatctgccccagggcgagcgcaaggatgatgccctgaaagactttttcgcctttgttggtggtgaagcaaacctgaaaggtgtggatctgctacctaaggatgttgctcaagcagtgctctacttggcaagcgatgaagcgaggtacatcagcgcgctcaacctcatggtggatggtggctttacctctgtgaatcacaatttgagagcatttgaagattaa</cdnaseq>

Protein Sequence

<aaseq>MSAAAAAAASSPAPRLESKVALVTGGASGIGEAIVRLFREHGAK VCIADIQDEAGQKLRDSLGGDQDVLFVHCDVSVEEDVARAVDATAEKFGTLDIMVNNA GFTGQKITDIRNIDFSEVRKVIDINLVGVFHGMKHAARIMIPNKKGSIISLGSVSSVI GGLGPHSYTATKHAVVGLTKNVAGELGKHGIRVNCVSPYAVPTALSMPYLPQGERKDD ALKDFFAFVGGEANLKGVDLLPKDVAQAVLYLASDEARYISALNLMVDGGFTSVNHNL RAFED</aaseq>

Gene Sequence

<dnaseqindica>121..164#1322..2123#acacacacactagtgcaagcagctcgagcttgagctccacctcgccatcgccggcgacttctcctgtcctgaccggccggagctccgatcttggcggtgaccaagagacctgacgagacgatgtccgccgccgccgccgccgccgcatcctcccccgctccccggtacgtacctggttctggtcgccgtaatccgatctcctctttttttttttcgcacggtcttcaccggcggcgctgtatgttagtttactcgatctcgaatccccgatgcgtcgccgccggtgaaggtcccgggctttcgccgtttgccatggcgaaatcgagggatctgactgactgactgactgtccctatccccttcccagtaagagtgggctgctcaactgataggttttggtgtgagagtgtttggggcttcttcagattgcccagaggaaaccccatatgttcttgaactgaaaagatgaatggggaatctcaatgttagtcaaagggggaattagtttctaattttcccttcaataacatgttagctggtgtgtcaagtcctgtaatttgtgaattgtgagagttcaggctagcaagattaagcttgtattttgttagaaataatgtggttaaaaatcatgtttgggtggttttatgagaaaaaaactgaaaacattgttcgcgaacaagcaagtaaacaactttgcaatggtgcttgcctggtctttcctcaactaggataatgttcttttcaagttaattagctgtcgcaactcactagtagaagtgcctatagaatttaatcaaaacggcggctcacttatccttcctctgccccttcgcaactgcattctggaatcagcttgaaatcccgcagactatcaccagcgcgagcgacctccatgctctgcgcccaaatggccgcctcccaacaaaacacttcaaggttttcttcttgctttgtctctggggattatggaatcatcgttatgatgttgtcttccgtggagaatccccctctctgcatagactagtttctagatgtattgaggatgcaaccttgtgggcagagagactagtttgtgctgacaggatcgttgtaatcctggaaacaaattctttcctccccccttcgcactatgtaatccaaagtcgtgtactcctatctttcaatgaaaattcaggtggggaagctctcccccccggtgaccagtctaaaaaaaataatttaatcaatggttcatgaaacactggtaattctgatactaaatacaatttgcatatttatcagttctttaaatttgatttgggttctttcctctggagaaaaggttggaaagcaaggttgcgctggttaccggtggtgcttcaggtattggtgaagcaattgttcgcctctttagagagcatggtgcaaaggtatgtattgcagatatccaagatgaagcaggtcagaagctccgggactcccttggaggtgaccaagatgtcttatttgtccactgcgatgtttcggtggaagaggatgtagcccgagcggtcgatgcaacagctgaaaagtttggtactcttgacatcatggtcaacaatgctggctttacaggccagaaaatcacagatatccgaaacatcgacttttctgaagtcaggaaggtaatcgacatcaatttagttggtgtattccacgggatgaaacacgcagcgcgcatcatgatccccaataagaaggggtccatcatctcattgggaagtgtttctagtgtcattggagggttgggacctcattcatacacagcaaccaagcatgctgtggtgggtctaaccaagaatgtagctggggaattggggaagcatgggatacgcgtgaactgcgtatctccctatgcagtgcccacggctctctccatgccgtatctgccccagggcgagcgcaaggatgatgccctgaaagactttttcgcctttgttggtggtgaagcaaacctgaaaggtgtggatctgctacctaaggatgttgctcaagcagtgctctacttggcaagcgatgaagcgaggtacatcagcgcgctcaacctcatggtggatggtggctttacctctgtgaatcacaatttgagagcatttgaagattaacagaagttgttaggcacaattggtactctagtttcagatgctatgtaccattctgattttagaactttgatcaattacctaaagtaagaatgtcaataaggaatgcaatcttgtatctgtggtattgtatagtactatgattgtattgccggtgcttaaggacaatcattgattattatcagcactattatgttacagttctg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0810800, RefSeq:Os03g0810800