Os03g0811700

From RiceWiki
Revision as of 13:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0811700| Description = Similar to Pre-mRNA branch site protein p14 (SF3B 14 kDa subunit)| Version = NM_001058209.1 GI:115456146 GeneID:43345...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0811700

Description

Similar to Pre-mRNA branch site protein p14 (SF3B 14 kDa subunit)

Version

NM_001058209.1 GI:115456146 GeneID:4334543

Length

834 bp

Definition

Oryza sativa Japonica Group Os03g0811700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34849546..34850379

Sequence Coding Region

34849629..34850021

Expression

GEO Profiles:Os03g0811700

Genome Context

<gbrowseImage1> name=NC_008396:34849546..34850379 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34849546..34850379 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggtgagcttgaggaagagcaacgcgaggctgccgccggaggtgaacagggtgctgtacgtgcggaacctgccgttcaacatctcgagcgaggagatgtacgacatcttcggcaagtacggcgcgatccggcagatccggctggggaacgccaaggacaccaggggcacggccttcgtcgtctacgaggacatctacgacgccaagaacgccgtcgaccacctctccggcttcaacgtcgccaaccgctacctcatcgtgctctactaccagccggccaagatgtccaagaagtcggacgtcaagaagaaggaggaggagatcaccaggctgcaggagaagtatggcctcggctccaagacgccttcatccgcccccgacgcgtag</cdnaseq>

Protein Sequence

<aaseq>MAAVSLRKSNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGA IRQIRLGNAKDTRGTAFVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPAKMSKKSD VKKKEEEITRLQEKYGLGSKTPSSAPDA</aaseq>

Gene Sequence

<dnaseqindica>84..476#agacgcggcgaggagaaagaaaaaaaaaatccccaaatcgaaagccgcgagagacagaaaccctagcggagaggagggcggcgatggcggcggtgagcttgaggaagagcaacgcgaggctgccgccggaggtgaacagggtgctgtacgtgcggaacctgccgttcaacatctcgagcgaggagatgtacgacatcttcggcaagtacggcgcgatccggcagatccggctggggaacgccaaggacaccaggggcacggccttcgtcgtctacgaggacatctacgacgccaagaacgccgtcgaccacctctccggcttcaacgtcgccaaccgctacctcatcgtgctctactaccagccggccaagatgtccaagaagtcggacgtcaagaagaaggaggaggagatcaccaggctgcaggagaagtatggcctcggctccaagacgccttcatccgcccccgacgcgtaggattctcatcagaaatcagttcttcagctagtacatgtatttaagaatcgggaattgcttattcaatcttgcagtttgtgctcgtgtgttgtctgtgcaatagtttcctatcaatgaaaatcacacagcggtatgtactttgactgaaagaacaatatgcaatgtgtactttgactgggagatctgattggtagcatctagttgaattgtcctgtgtttttaggccccttgagttgatatgcaattatgtgctcagaattaagttgtggctttgcacctctaatatgtgttacttattggtgagcttataatctatggatggatgtagtcaaaatatgaaagcattttcattattggt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0811700, RefSeq:Os03g0811700