Os03g0812400

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Revision as of 13:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0812400| Description = EF-Hand type domain containing protein| Version = NM_001058214.1 GI:115456156 GeneID:4334549| Length = 847 bp| Defi...")
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Gene Name

Os03g0812400

Description

EF-Hand type domain containing protein

Version

NM_001058214.1 GI:115456156 GeneID:4334549

Length

847 bp

Definition

Oryza sativa Japonica Group Os03g0812400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34886979..34887825

Sequence Coding Region

34887051..34887692

Expression

GEO Profiles:Os03g0812400

Genome Context

<gbrowseImage1> name=NC_008396:34886979..34887825 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:34886979..34887825 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgcagtttgtggcgacgttcgagtactgcagcctggccgtgtcggtgtcgtctctcctgatcaggttcgtcctccacccgctcgtcagggacgccatcatcctcgtcatgtccagagctggcgcgagctccctctcctgcgccctcctcggcctcctcgcgcacgacgacagcgccctcttcgccgccgacgatcgctgcgccggcgccgtagccgtcgtcgagccaccgcctccgctgaggcgggaatgcgagctgtgcgctcgtaggggcggcgccgggctgtcgcgccacgacgtcgcggcggtcgtggcgagcctcggcatggtcgccgccggcgaagatgacgacgacgacgacgaggcgtgcggcgtgtgcgaggcggtggcggcggtggaggagatggcggaggggaaggtggccggggagggcgagctgcgggaggcgttctacgtgttcgatcgcgacgaggacgggtacgtgagcgcggcggagctgtggaacgtgatgcggaggctgggcattgaggagggcgcgcggtacggcgactgcgtcaggatgatcgcggcgtacgacggcgacggcgatggccggatcagcttccaggagttcagagccatgatggagaacgcggtttag</cdnaseq>

Protein Sequence

<aaseq>MSQFVATFEYCSLAVSVSSLLIRFVLHPLVRDAIILVMSRAGAS SLSCALLGLLAHDDSALFAADDRCAGAVAVVEPPPPLRRECELCARRGGAGLSRHDVA AVVASLGMVAAGEDDDDDDEACGVCEAVAAVEEMAEGKVAGEGELREAFYVFDRDEDG YVSAAELWNVMRRLGIEEGARYGDCVRMIAAYDGDGDGRISFQEFRAMMENAV</aaseq>

Gene Sequence

<dnaseqindica>73..714#aacttcaattcaaagctagaacacaacacaaacacatcgcaaaagtaaacaaaaaaaaattactactcaaacatgtcgcagtttgtggcgacgttcgagtactgcagcctggccgtgtcggtgtcgtctctcctgatcaggttcgtcctccacccgctcgtcagggacgccatcatcctcgtcatgtccagagctggcgcgagctccctctcctgcgccctcctcggcctcctcgcgcacgacgacagcgccctcttcgccgccgacgatcgctgcgccggcgccgtagccgtcgtcgagccaccgcctccgctgaggcgggaatgcgagctgtgcgctcgtaggggcggcgccgggctgtcgcgccacgacgtcgcggcggtcgtggcgagcctcggcatggtcgccgccggcgaagatgacgacgacgacgacgaggcgtgcggcgtgtgcgaggcggtggcggcggtggaggagatggcggaggggaaggtggccggggagggcgagctgcgggaggcgttctacgtgttcgatcgcgacgaggacgggtacgtgagcgcggcggagctgtggaacgtgatgcggaggctgggcattgaggagggcgcgcggtacggcgactgcgtcaggatgatcgcggcgtacgacggcgacggcgatggccggatcagcttccaggagttcagagccatgatggagaacgcggtttagacgtacttgacggtccggagttcatacctcctactactacattgtatttagagatttaacggatactatttcagcgttccagatggtaaaatgtttaattacgacaagttttgttgaattaagctcggatatg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0812400, RefSeq:Os03g0812400