Os03g0815200

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Revision as of 13:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0815200| Description = Similar to Methylenetetrahydrofolate reductase (EC 1.5.1.20)| Version = NM_001058218.1 GI:115456164 GeneID:4334554| ...")
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Gene Name

Os03g0815200

Description

Similar to Methylenetetrahydrofolate reductase (EC 1.5.1.20)

Version

NM_001058218.1 GI:115456164 GeneID:4334554

Length

5505 bp

Definition

Oryza sativa Japonica Group Os03g0815200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35018557..35024061

Sequence Coding Region

35018873..35018956,35019288..35019622,35020076..35020253,35020352..35020432,35020776..35020887
,35020978..35021078,35021148..35021321,35021460..35021633,35021830..35021912
,35021999..35022059,35022216..35022398,35023777..35023995

Expression

GEO Profiles:Os03g0815200

Genome Context

<gbrowseImage1> name=NC_008396:35018557..35024061 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35018557..35024061 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggtgatcgagaagatccaggaggcggcggcggatgggcggacggtgttctcgttcgagtacttcccgcccaagacggaggaggggctcgacaacctgttcgagcggatggatcgcatggtggcgcacggccccaacttctgcgacatcacctggggcgccgggggatccaccgccgacctcaccctcgagatcgccaaccggatgcagaacatggtgtgtgtggaaacaatgatgcacctgacatgcaccaatatgccagttgagaagattgatgatgccttaacaacaataaagtctaatgggattcaaaatgttctggctcttaggggtgatcctccacatggtcaggacaaatttgttcaagttgctggtggattcgcttgtgctcttgatttggtacaacacattagagccaagtatggtgattattttggtattactgttgctggttatccagaggcccacccggatgcaatacaaagtacggaaggggctacaccagaagcatacagcaatgatcttgcttatttgaagcaaaaggttgatgctggtgctgaccttatcattacacagcttttctatgacactgatatctttctcaagtttgtgaatgactgccgccaaattggcataacttgccccattgttcctggcataatgcctataaataactacaaaggtttcctgcgcatgacagggttctgcaaaactaagataccagctgagatcactgctgcactggaacctattaaagataacgaggaggcggtcaaagcatatggaatccaccttggtactgaaatgtgcaagaaaattttagctactggaatcaagaccttgcacctttacacgctaaacatggagaagtctgctctaggaatattgatgaaccttggattaattgaggagtccaagatctcaaggtcattgccttggaggcccccaacaaatgttttccgtgtcaaggaggatgtccgccctatattctgggctaacagaccaaagagctatatttcaaggacccttggttgggatcaatacccacatgggcggtggggtgattcccggaacccatcgtatggagcacttactgactaccagttcactcgaccacgtgggaggggtaagaagctccaagaggaatgggcggttccagtgaaatctgttgaagacattaacgagcgattcatgaacttctgtcaaggaaaacttacaagcagcccatggtctgagcttgatggccttcaacctgagacaaagataatagacgaccaattggtgaagattaaccagaagggcttccttaccattaacagccaacctgctgttaatggagagagatctgattcaacaagtgttggatggggtggtcctggaggctatgtttaccagaaggcctatcttgagttcttctgttcaaaagagaagctggatcagctaattgagaagagcaaggcattcccttctcttacatacattgccgtgaacaaggacggagagtcattctcaaacattcccacaaacgctgtgaatgcggtcacatggggtgttttccctggcaaggaaatagtccagccaactgtcgttgactcagccagctttatggtttggaaagacgaagctttcgaaatttggtcaaagggttgggcttgcctgttccctgagggcgactcatctagggagatactagacaaggtccagaagagctacttcttggttagtcttgtggacaacgactacatcaacggtgatctcttcgcggcgttcaaggagatttga</cdnaseq>

Protein Sequence

<aaseq>MKVIEKIQEAAADGRTVFSFEYFPPKTEEGLDNLFERMDRMVAH GPNFCDITWGAGGSTADLTLEIANRMQNMVCVETMMHLTCTNMPVEKIDDALTTIKSN GIQNVLALRGDPPHGQDKFVQVAGGFACALDLVQHIRAKYGDYFGITVAGYPEAHPDA IQSTEGATPEAYSNDLAYLKQKVDAGADLIITQLFYDTDIFLKFVNDCRQIGITCPIV PGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGTEMCKKILA TGIKTLHLYTLNMEKSALGILMNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWAN RPKSYISRTLGWDQYPHGRWGDSRNPSYGALTDYQFTRPRGRGKKLQEEWAVPVKSVE DINERFMNFCQGKLTSSPWSELDGLQPETKIIDDQLVKINQKGFLTINSQPAVNGERS DSTSVGWGGPGGYVYQKAYLEFFCSKEKLDQLIEKSKAFPSLTYIAVNKDGESFSNIP TNAVNAVTWGVFPGKEIVQPTVVDSASFMVWKDEAFEIWSKGWACLFPEGDSSREILD KVQKSYFLVSLVDNDYINGDLFAAFKEI</aaseq>

Gene Sequence

<dnaseqindica>5106..5189#4440..4774#3809..3986#3630..3710#3175..3286#2984..3084#2741..2914#2429..2602#2150..2232#2003..2063#1664..1846#67..285#gcccgcgcaagccgcagcagcagcatcaggggaagggtctagaagcttctagaagcttcttccgagatgaaggtgatcgagaagatccaggaggcggcggcggatgggcggacggtgttctcgttcgagtacttcccgcccaagacggaggaggggctcgacaacctgttcgagcggatggatcgcatggtggcgcacggccccaacttctgcgacatcacctggggcgccgggggatccaccgccgacctcaccctcgagatcgccaaccggatgcagaacatggtacgcttgtgcgtgtgtgtgtgtgtgtttgtgtggtgtcgccgcctctcgatcgctcattctctcgcgcggcgcggtccgatctgatctgtttttttttgggcgcgatttggttcggcgtggcggaacggatcgtaggaagtggctatgtttgtgttgggtgggatgcttttggatcatgggtttagacaattagattcgctggttttggttcggggctttggtgagaactgagaaggggatgtgttcgatgaaatgccattttcgcttactcggtggtgattagatttggttaattgcatcagtcgttcctcgtttgcttcggtctcgtaagattgtgctgagacgagcgcacgtttatatactgcaatagttctcattgatacttgggacgaaatttgtttgagaccgtgctgttgtgttgtcggatgatgaggttgtgaaatggtgatataagagccgtttggatgataatcggtcgggtgatattctgcgataacgctgatagattaagaaataacaatgcctactttgagctccagttcggtttgcaactgagttatgcagaatgaggttccgttcatgttcaagtgccacacggtttagtgcctgattagtgctttttttttaagataatggaacttttgagctgttgtggttgcaatttggttgaaaactgggtttgtaactcgtagagttgatccatcctgatatctggtctcccagctcctggtaatggtaatgttaggagtgatctttccgagagaaaatgttttggtggattgaaacgaatttgccttagaagttggttagtgatcagcggatgattggatgatgtcacactattgggactagtttcctcacatggtgaggatgctagacatggagtggtgactttgggtggattcatagagatgactttgacaaaattcttggtagcaatatgtgccttttgcagccgtgctgatcccatgcaagatattgcatatcttgctgacttgtagttctacaagtaaacctggatattttctcctggcgtagatgatgttgataggattggcgaatcagttatcatgttgttttgtagtggcctatcatttatgaatacatcagatgcttgcatttcatctgttctctggactgggactcgtgactactgatggtcacaacacaaacaatgatttgtttttctgtgaatgtttggagccatgcatgcattgtacataagatgagcacagaagttatgtcttcatgccaatatatttctcaatataaatttcataaaataaagtatcttttgcaatttcaatatttcatacatcgttttcactggttaaatatagtcaatgctttatattattttggtgttgttttgcaggtgtgtgtggaaacaatgatgcacctgacatgcaccaatatgccagttgagaagattgatgatgccttaacaacaataaagtctaatgggattcaaaatgttctggctcttaggggtgatcctccacatggtcaggacaaatttgttcaagttgctggtggattcgcttgtgctcttgatttggtaaatatctcttcgattagttatgatagaaaggccaggatatggtggcgagctgattggtgctgccaatatttaggattatgtatataaaaaccatttatttgctgagagaaatcaccactatattcaaacctgcgttctattctccaattgcaggtacaacacattagagccaagtatggtgattattttggtattactgttgctggttatccaggttagcaaaacgtttctgctttatacagtgatattaaaccttaaaaattagaagctttatttatttatttttgtttcaaacgtcagaggcccacccggatgcaatacaaagtacggaaggggctacaccagaagcatacagcaatgatcttgcttatttgaagcaaaaggttctctttgatcacatgataatgactttttccattcaaatgagaacatcttctgttgtattaattaatcacctggacattgtctagcataagatcttatttcggaattatgtaaaactgttagaaaacataggtgtttgtttagcgtacctttgttctttgtcagcttcttatcgaatgcacactttcactgcaggttgatgctggtgctgaccttatcattacacagcttttctatgacactgatatctttctcaagtttgtgaatgactgccgccaaattggcataacttgccccattgttcctggcataatgcctataaataactacaaaggtttcctgcgcatgacagggttctgcaaaactaaggtatagcctgtttctgtagctccatgattagtaattgcatggagatagttcaaatggacatggatttatgtataagcttcaatgtgctgtacattgtttcccacagaatgccactgaaaattttgaatttaataacagataccagctgagatcactgctgcactggaacctattaaagataacgaggaggcggtcaaagcatatggaatccaccttggtactgaaatgtgcaagaaaattttagctactggaatcaagaccttgcacctttacacgctaaacatggagaagtctgctctaggaatattgatggtaatttccacatcttacttgatgcagtattttggtctggtgcatttctaacaagtaaaatttatccagaaccttggattaattgaggagtccaagatctcaaggtcattgccttggaggcccccaacaaatgttttccgtgtcaaggaggatgtccgccctatattctggtagttgtttaaaaaaaatatttgtcaaggtaattgaatcttattgttataaacactcattcaatctggtgaatgatgataactgagcagggctaacagaccaaagagctatatttcaaggacccttggttgggatcaatacccacatgggcggtggggtgattcccggaacccatcgtatggagcacttactgactaccaggttacttccatgcccctctgttccaattacaaatttggtgttctcaaccattttttcccgatatgctgtctgcagtattttgaaacacactaaaagttacatttatctattataaactataaagtgaactcttacatatgatttagcaacgtcagtacctctgtgtactggtacttggtaattgtcgaatacttgaatgtgggattgtgcaacatcagttgtcgggcatgtctattatttgtctccatattacatagaattgttcttttgtgataacaagttaagaaattttcacaaagttgttgctgtgtgtagtaacgcgttccttcttattattttacagttcactcgaccacgtgggaggggtaagaagctccaagaggaatgggcggttccagtgaaatctgttgaagacattaacgaggtaactgctgggctgcttgatatattatatatctttattatgtatagataaatacgagtgtatcattttttttttgctaaccaatttctgtcacacagcgattcatgaacttctgtcaaggaaaacttacaagcagcccatggtctgagcttgatggccttcaacctgagacaaagataatagacgaccaattggtgaagattaaccagaagggcttccttaccattaacagccaacctgctgttaatggagagagatctgattcaacaagtgttggtatgttcaatctatttcttatgtttgttcttccttttgttactggaagcaggatctttaagcatgtgcatgtttctgccatggcgctcttatacagtggtagtacttaaaatgccagtagttcatgtgtcgattgtatctgaaattgagaattattatgatgtttcatgtttgtagtgggcatgaagattttaaaccttatttgtagctttactagtgacatttaattatgaaatgttcactggcatgtttaatcatatgcccctcccttattataataaacctgaaatcaacatcgccataatgtctgggttcactacaatcgacacattagctatttgctattccactgtttaaggtgcaaacttcaacttgttcattaatgtctggttttatgtataatgctatatgggcgtgccttgccaacctgcttactggtatcctactgtgcaggatggggtggtcctggaggctatgtttaccagaaggcctatcttgagttcttctgttcaaaagagaagctggatcagctaattgagaagagcaaggcattcccttctcttacatacattgccgtgaacaaggacggagagtcattctcaaacattcccacaaacgctgtgaatgcggtcacatggggtgttttccctggcaaggaaatagtccagccaactgtcgttgactcagccagctttatggtttggaaagacgaagctttcgaaatttggtcaaagggttgggcttgcctgttccctgagggcgactcatctagggagatactagacaaggtaattcgacacaaaccttagcgttgaacctaatattttgtcgtagataaaattgaacagaacttgttgcactgatctgaatgccaccttttctcctatcctcccaatttctcataagacttgcatgttaaatagagtgttttagaaggcattcgtctaaattctaaaataccatttggcatgttttccccttatcccatgccacttgaaccactgtatcagccgtgatagggttgtggcattgtgctacatttcattgtatactccctgtatactgaatgcatcacctgacctcacaagcttacacatttcgctgctcttcgcttctcaggtccagaagagctacttcttggttagtcttgtggacaacgactacatcaacggtgatctcttcgcggcgttcaaggagatttgatgacatcttatagtctgcaacctctcgtgtctgaattcctatctttatcaagtgttattgcttccacgactataggacagctttcgtcgaaagcttttgctcatgtgatctcgaaggattcatctagtctgatttttcgtgacttgtatcggttttattggattcatccaacatatatcaataaaaaatgagttgtgtttcctttcttcctagttcagttaaaattatttccctcctgcgcttgtgctgtaattgtctgtgtacctgttgtttgtgactgtgttagttcccttggatatgatttcgtatttgatat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0815200, RefSeq:Os03g0815200