Os03g0815800

From RiceWiki
Revision as of 13:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0815800| Description = Similar to Ethylene-responsive transcription factor 5 (Ethylene-responsive element binding factor 5) (EREBP-5) (AtERF5...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0815800

Description

Similar to Ethylene-responsive transcription factor 5 (Ethylene-responsive element binding factor 5) (EREBP-5) (AtERF5)

Version

NM_001058221.1 GI:115456170 GeneID:4334558

Length

1217 bp

Definition

Oryza sativa Japonica Group Os03g0815800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35043164..35044380

Sequence Coding Region

35043466..35044191

Expression

GEO Profiles:Os03g0815800

Genome Context

<gbrowseImage1> name=NC_008396:35043164..35044380 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35043164..35044380 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtacaaaccctagcctgcacgagctggcggcgggggcggcgccgcggggacgcgtggtgcgtatcctcgtgcgcgacgccgacgccaccgactcgtcctccagcgaggacgaggcggttgcggtggcgcagcctcggccgcggcggaggggtaaggtgggtggtggtggtggtggtggtgggggcgtgaagcgccgcgtgatggaggcgggggcgggggaggcgaggccgaccgcgcggttccgcggcgtgcggcagcggccgtgggggaggttcgcggcggagatccgcgaccctcacctccgccgccgcctgtggctcggcaccttcgacaccgccgaggaggccgccgccgcatacgacgccgccagcgtccgcctccgcggttccagcgccgccaccaacttcgcctccgtccgctgctactcgctgccgccggagctacccaagccaactatttcaccgcctgaagcagctgtgaggccaatcaccttgccaattgggacagctaagccgacccttcttccacgggtgaaggaggaaggtgagagctgtggcggtcgggtcaaggaggaggccagtagctgtgaggtccaggtgcttgctccggagccaatgtggacgatgatttcaggcaagcgtaagaagcgatcgggctgtggaacccgtgtccgtgccttccatgctgtgtccgcctgtgtggaagaagttggcggggcctga</cdnaseq>

Protein Sequence

<aaseq>MGTNPSLHELAAGAAPRGRVVRILVRDADATDSSSSEDEAVAVA QPRPRRRGKVGGGGGGGGGVKRRVMEAGAGEARPTARFRGVRQRPWGRFAAEIRDPHL RRRLWLGTFDTAEEAAAAYDAASVRLRGSSAATNFASVRCYSLPPELPKPTISPPEAA VRPITLPIGTAKPTLLPRVKEEGESCGGRVKEEASSCEVQVLAPEPMWTMISGKRKKR SGCGTRVRAFHAVSACVEEVGGA</aaseq>

Gene Sequence

<dnaseqindica>190..915#gtcttcccgcttccattgcaaccccaccccgccgcacgccgccgcatcgatcggaaccaaaccctaaccctaaaccctagcccccccacctcgccttccaccccccacgctcccatggcggggcgcggaggctacgcgtagccacatcgatcgaacaccctgtatggattgaggtgggtttcccgaggcatgggtacaaaccctagcctgcacgagctggcggcgggggcggcgccgcggggacgcgtggtgcgtatcctcgtgcgcgacgccgacgccaccgactcgtcctccagcgaggacgaggcggttgcggtggcgcagcctcggccgcggcggaggggtaaggtgggtggtggtggtggtggtggtgggggcgtgaagcgccgcgtgatggaggcgggggcgggggaggcgaggccgaccgcgcggttccgcggcgtgcggcagcggccgtgggggaggttcgcggcggagatccgcgaccctcacctccgccgccgcctgtggctcggcaccttcgacaccgccgaggaggccgccgccgcatacgacgccgccagcgtccgcctccgcggttccagcgccgccaccaacttcgcctccgtccgctgctactcgctgccgccggagctacccaagccaactatttcaccgcctgaagcagctgtgaggccaatcaccttgccaattgggacagctaagccgacccttcttccacgggtgaaggaggaaggtgagagctgtggcggtcgggtcaaggaggaggccagtagctgtgaggtccaggtgcttgctccggagccaatgtggacgatgatttcaggcaagcgtaagaagcgatcgggctgtggaacccgtgtccgtgccttccatgctgtgtccgcctgtgtggaagaagttggcggggcctgagggtccaattatccgtaattactatcgttagcagctttattgttatgcatagcatcattggaaacttggtattgtgtaattttggttagtattgaacttatgatgtgaagatgactctgcatgtgacctgatttggtaaggttatgatgtgtatatacggtatggttgctgatatatgtgatgcagtatggtaggcttcgataaggtgttgtggaattagtatgttgcatctaaataagacctttgatgtgagatatagacatgttcttcgattagaataaaatatagtagaaaattattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0815800, RefSeq:Os03g0815800