Os03g0816000

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Revision as of 13:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0816000| Description = Conserved hypothetical protein| Version = NM_001058223.2 GI:297601891 GeneID:4334560| Length = 3014 bp| Definition ...")
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Gene Name

Os03g0816000

Description

Conserved hypothetical protein

Version

NM_001058223.2 GI:297601891 GeneID:4334560

Length

3014 bp

Definition

Oryza sativa Japonica Group Os03g0816000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35049609..35052622

Sequence Coding Region

35049748..35049877,35049959..35050029,35050105..35050200,35050298..35050380,35050856..35050913
,35051387..35051468,35051792..35052080,35052287..35052560

Expression

GEO Profiles:Os03g0816000

Genome Context

<gbrowseImage1> name=NC_008396:35049609..35052622 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35049609..35052622 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtctcctcctccgggagcccaccgcgcggcctcctcgagtggggcgctcgcgccggcggccttccccgccgcgtcccacttcgcctcacgcgccgccgccccgttcctccggcagcaaccccaccccggcggcggcggcgactccgacggcgacaacgccgtggaggaggtcgacgagggcgacgacgacgaagacgacgaggaggaggaggccgagctggcggacggagcgccctgcagctcgcagcagcggtgcgcctccactccaggaatcgggcgggcagggatgaacagggggaatggaatgaggcaaatcgaagaggagcagcaatggcagcacagccacatctacaactgtgggaacgagcagtatgggcatgcctcgtctagagaggatgaacccagcaccatccccagggagatgagggtggagaatggatatggagttattgggagaagagagggaggtcctgcatccagctactgggacctactcagagcacacctctccgatccgttgacgtgggtatctccgaatgattgttgttctcttggaaaaggtatactcatggatgatgcaatgattctatcgtgtgggcactcttatggaagtaatggaatgcagcatatctacagaatgaaagcttgtggcaaatgtggtcagccaattaccgaggactctattcgaccaaacttggctctccgccttgcagttcaggcatttaaacgcgaagaagagtcagctaaatctctaaaaagaagaagagagcgccttgagcaggacaaatgtggcaatgatgaaccaaatccaactgagatttctagaggtaaaggtgtccagtttccttttgctgtctttgaccgagtcataatcaagggcaacaaaaggaccccagaacgatttgtgggacgcgtagcagttgtgacagcacagtgtctaaatggatggtatgtggtgaagaccttagacaatgcagagagtgtgaagttgcaataccgttctctggctaagtttactgatggcggccagtcctctgctatggtcgcaaacaatgcccagaatgcaaactggttgtaa</cdnaseq>

Protein Sequence

<aaseq>MASPPPGAHRAASSSGALAPAAFPAASHFASRAAAPFLRQQPHP GGGGDSDGDNAVEEVDEGDDDEDDEEEEAELADGAPCSSQQRCASTPGIGRAGMNRGN GMRQIEEEQQWQHSHIYNCGNEQYGHASSREDEPSTIPREMRVENGYGVIGRREGGPA SSYWDLLRAHLSDPLTWVSPNDCCSLGKGILMDDAMILSCGHSYGSNGMQHIYRMKAC GKCGQPITEDSIRPNLALRLAVQAFKREEESAKSLKRRRERLEQDKCGNDEPNPTEIS RGKGVQFPFAVFDRVIIKGNKRTPERFVGRVAVVTAQCLNGWYVVKTLDNAESVKLQY RSLAKFTDGGQSSAMVANNAQNANWL</aaseq>

Gene Sequence

<dnaseqindica>2746..2875#2594..2664#2423..2518#2243..2325#1710..1767#1155..1236#543..831#63..336#aggaaacacagtggttgcagactcgcgctctctctctctctctctcgatctccctgaccgccatggcgtctcctcctccgggagcccaccgcgcggcctcctcgagtggggcgctcgcgccggcggccttccccgccgcgtcccacttcgcctcacgcgccgccgccccgttcctccggcagcaaccccaccccggcggcggcggcgactccgacggcgacaacgccgtggaggaggtcgacgagggcgacgacgacgaagacgacgaggaggaggaggccgagctggcggacggagcgccctgcagctcgcagcagcggtgcgcctccactccaggtgagcacagggttcgcgcgagcgcgagctgcttttgctcttgcaaggtcgtaaattaagcttgtagaattgcttcgatttgtgaaaaagaaataatatccaggattgagctgggttcatgtggcattcgagcaaacaaacatctcgttaatatttttctattatgtgaaattgatcaattgtttcttggctgattgacacgccaggaatcgggcgggcagggatgaacagggggaatggaatgaggcaaatcgaagaggagcagcaatggcagcacagccacatctacaactgtgggaacgagcagtatgggcatgcctcgtctagagaggatgaacccagcaccatccccagggagatgagggtggagaatggatatggagttattgggagaagagagggaggtcctgcatccagctactgggacctactcagagcacacctctccgatccgttgacgtgggtatctccgaatgattgttgttctcttggaaagtttagtgtttgaatgtttgattaacaaggattacctggctattgtttcaccttcttgattagtttgtagtagtacttgagcaatggagcgtaagattgaggctatgacatgctatctatattagttactctttaaattatattggaagagcttgcttctatgctagtcattgcctctatcctgattatgagtactagatatgcgtaacacttgagtttgtcacatcaaaatcatgccttggtctgataatatataaataaaaaattgggataaagtatttgaacatcttaattcatttactgtcttgcggcttaatttgtagaggtatactcatggatgatgcaatgattctatcgtgtgggcactcttatggaagtaatggaatgcagcatatctacagaatggtttgtcaaaggatccttaccgtgtgatagtgttttgtgtgttggcatctgcatcctgcttgttgctgcatatagtcgttgatagtgctgagactttcttaccccaattttgttttgttcatatttttgtagaggttgttcgtcttaaagtatagtgttttttattgtgctctgctcatatgtccataggtatggcttatgtccagtgagaagcatgacatatactctttgcttttctaaggtagtgacatcagatttaaaaaaaatgtatcaactgagggttccaagaacattatcttgtctgcactagcaatgcatcaactaatatttaatttcaaggcaaaacattactgaaataatcctggaaacgggaaaacctgatattacagtgctactgacagagggaggggaggggatgtgacattgcaagtgcatgtggaagtgacatggaatagtttctacttgccatgcagaaagcttgtggcaaatgtggtcagccaattaccgaggactctattcgaccaaacttgggtatgtacccttttttttttcattctgatttaattgccaaattgatgttgtgtgacattgtcatttcatctgcttagttataaggggacattctgatttaattgtcaaattgccaaattggtattgtgcgacactgtcatttcatctgcttagttgtaaggggaccagcagtttcctaccatctcctaatcttagtttgttctaggggatataagttgagatatttgcataattgttgcaacttaatcccataggctgaatactcttatttcttgtaaaactttggtaacaaacaatagttgatgccaagctgttcagatatctatgccattctactaacgtgtaccattcaacatcttccttttttttatccttgctagttaagtacacagacttttggttttttccatgcccatgatttttattttggcttctttctgtgctgttaacatcattttattttgcacattttcagctctccgccttgcagttcaggcatttaaacgcgaagaagagtcagctaaatctctaaaaagaagaagagagcgccttgagcaggtatcaaacttttctcatctattctattaatatttggatttgaacacttgttgtgtgttatttagtgttctaaactctgttctttctctgaaatgaggacaaatgtggcaatgatgaaccaaatccaactgagatttctagaggtaaaggtgtccagtttccttttgctgtctttgaccgagtcataatcaaggtattttatctgtgtagacactcgcttttgtttccgtttgccccatatttgttacaagcaaaatgaatttctcagggcaacaaaaggaccccagaacgatttgtgggacgcgtagcagttgtgacagcacagtgtctaaatggatggttagaaacatttttttcccaagttttaatatgatcatcgttgatatcaaacaccgtgcttacccggtacctgcacaccaggtatgtggtgaagaccttagacaatgcagagagtgtgaagttgcaataccgttctctggctaagtttactgatggcggccagtcctctgctatggtcgcaaacaatgcccagaatgcaaactggttgtaaggtaccaaagcagatcatcatacagtgcttgtagctgccaaggatctcctatggtgcttcagattacttttctttcttcccttttttccctatcaccaggagagggtgaatctgaggaagatttggctgtttacaaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0816000, RefSeq:Os03g0816000