Os10g0368800

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Revision as of 08:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0368800| Description = DEATH-like domain containing protein| Version = NM_001189187.1 GI:297727504 GeneID:9268954| Length = 5568 bp| Defin...")
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Gene Name

Os10g0368800

Description

DEATH-like domain containing protein

Version

NM_001189187.1 GI:297727504 GeneID:9268954

Length

5568 bp

Definition

Oryza sativa Japonica Group Os10g0368800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:11828066..11833633

Sequence Coding Region

11828066..11828354,11828427..11828710,11830032..11830159,11831283..11831367,11831678..11833633

Expression

GEO Profiles:Os10g0368800

Genome Context

<gbrowseImage1> name=NC_008403:11828066..11833633 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:11828066..11833633 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagcaccacccgcctcgcctcccgccgtccgccgccggcgccgcggcgacgtcgtggccggagctcctcacgccgttcgacctctcccgcctccgcgccacgctcgcctcccgcccgctcaccccgcgccgcctcggccgcctcctcgcgctcccgctctccccggccacctccctcctcctcctcacctggtacgcctcctcccacccggcactctcctccctcccgctccgccctctcctcgccggcggcgaccccgaccgcgccctctccctcctcgactccctcccgcccggcttcctcccactccgcgagtccctcctcctcccgctgctccgatctttgcctcccggtcgcgccctccacctgctcgaccaattgccccgccgcttcggtgttcagccgtcgttccgctcctacaacgtcgtcctgtcagtgctcgccagggcggactgccacgccgacgcgctcgcgctctaccgccggatggtccacagggaccgcgtcccgcccaccaccttcacgttcggcgtcgccgcgcgggcgctctgccgcctcggccgcgccgacgaggcgctcgcgctgctccgcgggatggcgcggcacgggtgcgtccccgacgccgtgctctaccagacggtgatccacgcgctgtgcgatcagggaggggtcaccgaggccgccacgctgctcaacgagatgctcctcatgggttgcgccgcggacgtgaacacgttcgacgatgtcgtgcgtgggatgtgcggcctcgggcgggtacgcgaggcggcgaggctggttgacaggatgatgacgaaaggctgcatgcccggcgtgatgacgtatggtttcctcctgcagggactgtgcagggtgaggcaggctgatgaggcacgggcaatgctcgggagggtgccggagctgaatgtcgtgttgtttaacacggtgattggcggctgtctcgcagaggggaagctagcagaggctacagagctgtatgagacaatgggtttgaagggctgccaaccagacgcgcacacctacagtatattgatgcatggtctttgcaagcttggaaggatcggttccgctgtgcgattgcttagagaaatggagaagaagggatttgctccgaacgtagtcacctacacgatcgtgctacattccttttgcaagaatggcatgtgggatgacacaagagcattgctggaggagatgtcagcaaagggcttgactttgaattcacaagggtacaatggaatgatatatgcactatgcaaggatggcaggatggacgaggcgatggggctcattcaagagatgagaagtcaagggtgtaaccctgatatttgctcatataatacaataatttatcacttgtgcaacaatgaacagatggaggaagcagaacatatgtttgaaaacttacttgaggagggtgttgttgcaaatggtataacttacaatacaatcattcatgcactgctgcgtgatggaaggtggcaggatgctgtgagacttgcgaaggaaatgatacttcatggttgctcacttgatgttgttagctacaacgggctgataaaagccatgtgcaaagatgggaatgttgatcggagccttgtgcttcttgaagaaatggcagaaaagggtattaagccaaataatgtttcatacaacattctgatcagtgagctttgtaaggagagaagggtacgtgatgctctagagctctcaaagcagatgttgaatcaagggcttgctcctgacattgtcacttacaatacactcataaatggattatgcaaaatgggatggatgcacgccgctctcaatctcctagagaagctacacaatgaaaatgtgcatcctgatattattacatacaatattctcattagttggcactgcaaagtcagattgcttgatgatgctgctatgcttctaaacagggcaatggcagctgtatgtccagtgggtgatcgtagaataatgcagattcttcctgacaagaatttcaagttgtacttacatacaaaaggagatgatttccaacactcactcggctgtgtgaagccatcatgtcctgctgggaaggatcgatgtgaaagaaagactgggcggtgctggcgtgctgctcgccgccggccaggacaggggggcgaacagcttgagaggatcatccgggctctagtgcgccgtactcgacacagcaggggccgtggtgcgggcattgccggccgtgccctcggtctcctccccctagcttcgctggacatggaggacaacaccacgatgatggcgccactgcccaaaggaacaccagagccggcaacaccgactccaacaccctcgcgactcgccgagggcctccgatggtgcccgtcatgtgcgctgcaccagaatgaattctggtggagtcaccgcatcactgcgagtcccatgggtggacacatcttcgccgcgccatcaccatcgccggactactcaccagagacgccgctgcacatacctacaccggttattccgctggagttcctcctcattggaaccctcgctgcacgtcgtggagccccgcccttctacatggcagcatggggctccggcgagagctccgcccctccaccgacccctctattccccgacccccgccgcatcatcaagaacgggcatgtcccggccaagacaagcggcagtggcaagcctagtcgtcctccatcctcgagtgagtgggaggtctga</cdnaseq>

Protein Sequence

<aaseq>MAEHHPPRLPPSAAGAAATSWPELLTPFDLSRLRATLASRPLTP RRLGRLLALPLSPATSLLLLTWYASSHPALSSLPLRPLLAGGDPDRALSLLDSLPPGF LPLRESLLLPLLRSLPPGRALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALA LYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIH ALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC MPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELY ETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFC KNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPD ICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL CKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHP DIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPDKNFKLYLHTKGD DFQHSLGCVKPSCPAGKDRCERKTGRCWRAARRRPGQGGEQLERIIRALVRRTRHSRG RGAGIAGRALGLLPLASLDMEDNTTMMAPLPKGTPEPATPTPTPSRLAEGLRWCPSCA LHQNEFWWSHRITASPMGGHIFAAPSPSPDYSPETPLHIPTPVIPLEFLLIGTLAARR GAPPFYMAAWGSGESSAPPPTPLFPDPRRIIKNGHVPAKTSGSGKPSRPPSSSEWEV</aaseq>

Gene Sequence

<dnaseqindica>5280..5568#4924..5207#3475..3602#2267..2351#1..1956#atggcggagcaccacccgcctcgcctcccgccgtccgccgccggcgccgcggcgacgtcgtggccggagctcctcacgccgttcgacctctcccgcctccgcgccacgctcgcctcccgcccgctcaccccgcgccgcctcggccgcctcctcgcgctcccgctctccccggccacctccctcctcctcctcacctggtacgcctcctcccacccggcactctcctccctcccgctccgccctctcctcgccggcggcgaccccgaccgcgccctctccctcctcgactccctcccgcccggcttcctcccactccgcgagtccctcctcctcccgctgctccgatctttgcctcccggtcgcgccctccacctgctcgaccaattgccccgccgcttcggtgttcagccgtcgttccgctcctacaacgtcgtcctgtcagtgctcgccagggcggactgccacgccgacgcgctcgcgctctaccgccggatggtccacagggaccgcgtcccgcccaccaccttcacgttcggcgtcgccgcgcgggcgctctgccgcctcggccgcgccgacgaggcgctcgcgctgctccgcgggatggcgcggcacgggtgcgtccccgacgccgtgctctaccagacggtgatccacgcgctgtgcgatcagggaggggtcaccgaggccgccacgctgctcaacgagatgctcctcatgggttgcgccgcggacgtgaacacgttcgacgatgtcgtgcgtgggatgtgcggcctcgggcgggtacgcgaggcggcgaggctggttgacaggatgatgacgaaaggctgcatgcccggcgtgatgacgtatggtttcctcctgcagggactgtgcagggtgaggcaggctgatgaggcacgggcaatgctcgggagggtgccggagctgaatgtcgtgttgtttaacacggtgattggcggctgtctcgcagaggggaagctagcagaggctacagagctgtatgagacaatgggtttgaagggctgccaaccagacgcgcacacctacagtatattgatgcatggtctttgcaagcttggaaggatcggttccgctgtgcgattgcttagagaaatggagaagaagggatttgctccgaacgtagtcacctacacgatcgtgctacattccttttgcaagaatggcatgtgggatgacacaagagcattgctggaggagatgtcagcaaagggcttgactttgaattcacaagggtacaatggaatgatatatgcactatgcaaggatggcaggatggacgaggcgatggggctcattcaagagatgagaagtcaagggtgtaaccctgatatttgctcatataatacaataatttatcacttgtgcaacaatgaacagatggaggaagcagaacatatgtttgaaaacttacttgaggagggtgttgttgcaaatggtataacttacaatacaatcattcatgcactgctgcgtgatggaaggtggcaggatgctgtgagacttgcgaaggaaatgatacttcatggttgctcacttgatgttgttagctacaacgggctgataaaagccatgtgcaaagatgggaatgttgatcggagccttgtgcttcttgaagaaatggcagaaaagggtattaagccaaataatgtttcatacaacattctgatcagtgagctttgtaaggagagaagggtacgtgatgctctagagctctcaaagcagatgttgaatcaagggcttgctcctgacattgtcacttacaatacactcataaatggattatgcaaaatgggatggatgcacgccgctctcaatctcctagagaagctacacaatgaaaatgtgcatcctgatattattacatacaatattctcattagttggcactgcaaagtcagattgcttgatgatgctgctatgcttctaaacagggcagtaagtggtggaatagtacctaatgagcgcacatggggaattatggtacaaaactttgtcaggaagccacttaccattttggctgaccaggttgaagtgtattagaaacatgtgcttctctatgttatatttgatggttgttgcggcttttgaagttaccgtagcatccgttgttcaatcaaaatgaaatggtcatatcatggtgttcatcgctgatttcatcatgctcggtgacctggtatgtatttcccctcttgttgaaagtgtgtactttccatctgttaacccttttgttgacattgttctacagatggcagctgtatgtccagtgggtgatcgtagaataatgcagattcttcctgacaagaatttcaagttgtacttacatacaaaaggtaataacccttaaatttcaactcgtgtaaaattagaacaatagtgctgactgttgagatcttggcccaccatccatacctttgatttttgtaaagaagaaagagaaaataggtccagatcaatttgttcctaagatggcagatgcttacttttcatgtatctttcagctcatctcagattcctatctgtattgcggtagggccaatgaatgcaaagctaacattttattagaacagtctaccagtttcattgattctgctcctaaggttggaggtgtttccttatccattgatcctggtcctgccgtgggttcaacatccattctatgcttcagttctgggtaagtgggtgttgtgtaccgcaggcgcaagcgcgcgccagcctcatcgggagctgttgggctgccagcagatgtgcaggaacagatgccagaaaggacgcacagcgagtgaaggcgtaatcgggtgcttggatcacagtgctttgcttcgtttagattgcatttcttatccctttgaaatagcatctggtttccttttgtttagcattcggtttagccatgtaagccatataaatggcaccattttagatgaatagagcaagcaagatcaatctcagttcttcatccccttgttctcagttttctcatctcctgctgctgtgcttttgccgtgatcaccatgggctgttcattgtctaagccgccaaagccacgccctactacctcgcattcctgtcccatctgatcattaccggatactcataacatggttgctcttctctgctatctgctgtttcttcttcttttaggattacatgtggttctaggctattgcttgactaacgttcgttgattagttatgggtggagatgctaccagtggcacatttgctactatcttttgttgattagttatgagtggagatgctaccagtgacaaaaaacgaagatgatgtatttgcagcaaaagtagtgatggttgaaatattatgcatcattactgaatacaatttgttgctgtagcaactagtaactagtgtttttgaactgtctattattatgatcagcgttttgagttctaactatatttatctatacatggtatgtgcgtatgcacggcaggagatgatttccaacactcactcggctgtgtgaagccatcatgtcctgctgggaaggatcgatgtgaaagaaagactgggcggtgctggcgtgctgctcgccgccggccaggacaggggggcgaacaggtaacttgctttcttgcagttattttctgggtttctgttctatctgttgccattttagattgtattttttttcttgctaaaatagcatggaatggtgtcatgggaactagaatgtctttgggtattgcgttgggcctgttcctgcttggttgctccacggctgcaatttttcagaaatttaatggaaactcaccttgacgatctagggaaatgtgggaacactagaagatgaaaatgcctctcatcagaattagtcttagcagagaattgtattgtattgtattggttgcacgctaccaattcatcagggccaaagattgtgataacctcatgacagcatacacatgtggttgcgagctttcaaataaatgtgcatatccatagcctaatttatttattctgctatcataatgtttgtaacttagtgatgctatagctaaatgaggaagcttgctttgttgcaaactatataagagagataagaacccagcattttttttttaatttctagtatctgatcttttcgtaagagtaattttcgctctcttttttttttgcggggaagaataaatttcacttatctacaacctttagttacaagaatagcaatgaacttcactgccaaaaattctgactaccctttactacggccgtacggcgtagtatagtacaatatgatccatttgatcaagagcaattgacagcccatattcatcctagggcagctaccattaaaaaaaaaaatcccctttcacatgcgtaaccttgcagctagttgtatttcctactgttttaagtatgatattgacaatagtagccactgagaggatggacaaaattgtccaaaaataacctcaagaaagcaaatttggtcatctgtgctgcttctctgtcactcttggcttgcaattgttacaaaagccatcattaggccatatttgatctcatcaaagcgcaacaatgacagcaatcaaatgaatcatcaatcttgtaacagccatattaaggagaatttgtgtcatataacaaccacatttagaggcttaaaacctccttaaatcctaggagaatcctaggcatgtaatacataaatcatccctataaaaggggacatttgagatcaatgaaaagagagggaattcacactttcactgttcattcattttgtactctaatacgttatcagcaacgctctactgagaaagaacggtgaaactcacctgcacgtggagggtaagatggcacatcctgttctctcgatgccggttcttcccttcctcgcaacatccgtgctcgccatctccgtcaactcatgcatcagcttgagaggatcatccgggctctagtgcgccgtactcgacacagcaggggccgtggtgcgggcattgccggccgtgccctcggtctcctccccctagcttcgctggacatggaggacaacaccacgatgatggcgccactgcccaaaggaacaccagagccggcaacaccgactccaacaccctcgcgactcgccgagggcctccgatggtgcccgtcatgtgcgctgcaccagaatgaattctggtggagtcaccgcatcactgcgagtcccatgggtggacagtgagggtgcggccgcagcaggagatgcccgacgtggtgacggccttctgtcctcatcacggctggacaaagcatcttcgccgcgccatcaccatcgccggactactcaccagagacgccgctgcacatacctacaccggttattccgctggagttcctcctcattggaaccctcgctgcacgtcgtggagccccgcccttctacatggcagcatggggctccggcgagagctccgcccctccaccgacccctctattccccgacccccgccgcatcatcaagaacgggcatgtcccggccaagacaagcggcagtggcaagcctagtcgtcctccatcctcgagtgagtgggaggtctga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0368800, RefSeq:Os10g0368800