Os03g0816500

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Revision as of 13:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0816500| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001058228.1 GI:115456184 GeneID:4334565| Length = 3961 ...")
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Gene Name

Os03g0816500

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001058228.1 GI:115456184 GeneID:4334565

Length

3961 bp

Definition

Oryza sativa Japonica Group Os03g0816500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35085179..35089139

Sequence Coding Region

35085395..35085742,35086117..35086284,35087177..35087581,35087926..35088270,35088535..35088810

Expression

GEO Profiles:Os03g0816500

Genome Context

<gbrowseImage1> name=NC_008396:35085179..35089139 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35085179..35089139 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacagcagcaagcagcagctcgccgtttggccggtgtccgccgccaagaagtacgccggcttcgacggcaaggcggcggcgagggagcggtcgggcctcgcgaacgcgtcgttccgggtgtactacagcctccgcgccggcgccgtgccgttcctgtgggagtcgtcgccgggaacgcccaaggcggccgccgtctcgtcgccggcgagggagtcatcatcggcggcgcgtggcgctctgccgcccatctcgccgccgccgtcgtaccagtcggtcgagatgaagaagggggggaggtgccggccgaggtcgtcgtggccggcggcggcggcggcgggcgacatcgcgccgctcaagggagaaagcgtaaagccgtttcccgctttagttctcgcatccgcgctaaccctcgcggcttcgtcgatggtcggcggcggcggcggcggcggccacggggtcaggacgccggcgaacttccccccgcggcagaaggctcgcctccctcgcggaccggttcatgagaagtcgttggaacagcaaaagaaggggccaagttcatcctctccttcagttagcagtaacaagtccccactccaattggctgcagcaattgttcaaccacagaaaccgctagagtcaccacagcacatggttacaccggttcgactgcaagaatctccaggcccaagaaccattccatgcagttctggatctgtaggatctggttcaggagctgccccatttgacatatgcataaaaagagatgataagtgctccatcaagttaagtcgttctttactggaaatcaacagagaaaaaagacgagaaagggagcaactttccaaggaggcagctccattgcaatatttgagacctgggatggttctgttgaaaaagttcttaaagcatgatgatcaggttgacattatcagacgctgccagaaacttggtattggctcaggaggattttatactcctggctacagagatggtggtaaattaagtttgcagatgatgtgcttagggaagaactgggatccaaattcacgttcatatggagatacacgtccatttgatggtgctcaaccaccaagtataccagaagtattcagtaagatagttaaagatgccatccaagcttccaatgaatttttgagacaaaaagccagacctgccaatgatgttgaagaacttcctccactgtcaccagatatctgccttgttaacttctataccagcagtggtaagttaggtcttcaccaggacaaagatgaaacgaaacccagccttcataagggattgcctgttgtttcattttcgctaggtgacactgcagaattcttgtatggtgacgtgaacgatgtggataaagcttcaaaggttgatctggaatctggtgatgttctcatatttggtggtaaatcaaggctcatattccatggggtttccagaatcaaaccaaaaacagcaccaaattggctgaccgatgaagcaaaacttcgacctgggcgtctgaacctcacattcaggcagcattag</cdnaseq>

Protein Sequence

<aaseq>MDSSKQQLAVWPVSAAKKYAGFDGKAAARERSGLANASFRVYYS LRAGAVPFLWESSPGTPKAAAVSSPARESSSAARGALPPISPPPSYQSVEMKKGGRCR PRSSWPAAAAAGDIAPLKGESVKPFPALVLASALTLAASSMVGGGGGGGHGVRTPANF PPRQKARLPRGPVHEKSLEQQKKGPSSSSPSVSSNKSPLQLAAAIVQPQKPLESPQHM VTPVRLQESPGPRTIPCSSGSVGSGSGAAPFDICIKRDDKCSIKLSRSLLEINREKRR EREQLSKEAAPLQYLRPGMVLLKKFLKHDDQVDIIRRCQKLGIGSGGFYTPGYRDGGK LSLQMMCLGKNWDPNSRSYGDTRPFDGAQPPSIPEVFSKIVKDAIQASNEFLRQKARP ANDVEELPPLSPDICLVNFYTSSGKLGLHQDKDETKPSLHKGLPVVSFSLGDTAEFLY GDVNDVDKASKVDLESGDVLIFGGKSRLIFHGVSRIKPKTAPNWLTDEAKLRPGRLNL TFRQH</aaseq>

Gene Sequence

<dnaseqindica>217..564#939..1106#1999..2403#2748..3092#3357..3632#aaggtttgctcactttgtcgcagcatttcaagctctcctaacctcagataaatgatagccattagaaccctagaaggatcattatcattatcctgaaataattccggtgaaattcctgtgttcccaaatagcagagcaagatttaatttcttgttaattattttttagaaggaaaggagcattgcgagtttttggcgccaagaagcaagaaaggtcatggacagcagcaagcagcagctcgccgtttggccggtgtccgccgccaagaagtacgccggcttcgacggcaaggcggcggcgagggagcggtcgggcctcgcgaacgcgtcgttccgggtgtactacagcctccgcgccggcgccgtgccgttcctgtgggagtcgtcgccgggaacgcccaaggcggccgccgtctcgtcgccggcgagggagtcatcatcggcggcgcgtggcgctctgccgcccatctcgccgccgccgtcgtaccagtcggtcgagatgaagaagggggggaggtgccggccgaggtcgtcgtggccggcggcggcggcggcgggcgacatcgtgagggcgctgctcggcatgctcgggctcgggaagtggcgccgccgccgccaccaccaccaccggtcgtcgtcgacgcgacggcgctccgcctcggtctccgagctgccgccgttcgcatcgctcccgtattgacacgtgtacaatcagattaattaattaattacaactttattatggacggatgattaatcacggatgttgcatgtaaattacggaggcggatgccactttgctctgtgattatctcctaatctctcgggttttcgcgtcgttaattagcagagtctgagtcggtttagcgcacggttataaaacgagtgggcacatcgatttgaaacgagtcgcgtcgccgctgcgtttccgaagagaaggcgccgctcaagggagaaagcgtaaagccgtttcccgctttagttctcgcatccgcgctaaccctcgcggcttcgtcgatggtcggcggcggcggcggcggcggccacggggtcaggacgccggcgaacttccccccgcggcagaaggctcgcctccctcgcggaccggtacgcgccaccgtgccctagtgtttttttttttgaaacctccgggattttcttctttccgatggattccgattgcaactggtcgcgccgccaccttgtttccgcctctactagagtactagacttgggttgccatgacgccggtgccgtgctttaaatttcctgaaatcacatatgtaatgctgtattgctattgtttgcggcgatggttagggttcgacattggatcagtcgtcagttaatgtttaattattcttttggtttggtgtgtgtgaagtaggaaacctataatcgtctctttggcaactgggcaatggggaagtagtagatccatgtgattgcaaatgatactgcattcctttctctgtttctcagtacatgattcctaatcgggtttggtgtaatgatctcgataggttgaggaactgaaccttataatgtatatacttttacatgacgagcagcagtccgaaaatgttcttcaggattcttgttactctacagcagcttgcctatgcatattcttattattgcaatacaatttgtattgctttcttgtatgacctgtgtagaactgcaggcttcaccattatttatttttgctgcctcgtttcgattagtacatctactgttagagataaaaggagatgcacttgatagtgcagtggcaaggggtgtgtggttttaaccccgatgtcccgtgttcaatcctcaacgtgctcataatttcttctttaaaatatttggagtgacgtctctccctaatctcctttttttttcctgttagagataaaagcttacacaaacttgttccatgttaggtatattttagcttgtaccttgtgaggccttttgtttgtactctgcttctgacacactctgtgtttttcaggttcatgagaagtcgttggaacagcaaaagaaggggccaagttcatcctctccttcagttagcagtaacaagtccccactccaattggctgcagcaattgttcaaccacagaaaccgctagagtcaccacagcacatggttacaccggttcgactgcaagaatctccaggcccaagaaccattccatgcagttctggatctgtaggatctggttcaggagctgccccatttgacatatgcataaaaagagatgataagtgctccatcaagttaagtcgttctttactggaaatcaacagagaaaaaagacgagaaagggagcaactttccaaggaggcagctccattgcaatatttgagacctgggatggttctgttgaaaaagttcttaaagcatgatgatcaggtatctcaatatcaaacatgttgctcaattttactacagtttctgccagcatcaacatttgtttcaaaagtactatcaatagttgttttccattcattttgctctttttgtgttggaatctggaatcatgtgcactcatgattttgaagttctatgtcactactgtgactctctcattggcacagtttgctacaactttcgtagaattttcagaattcctcacattaatatgcactttctcaatttatttgattattgtgattttatttaggttgtattataaattcccaatgtttatttaattttgaaagtatatatctaatctcttttatcgcacatatcaggttgacattatcagacgctgccagaaacttggtattggctcaggaggattttatactcctggctacagagatggtggtaaattaagtttgcagatgatgtgcttagggaagaactgggatccaaattcacgttcatatggagatacacgtccatttgatggtgctcaaccaccaagtataccagaagtattcagtaagatagttaaagatgccatccaagcttccaatgaatttttgagacaaaaagccagacctgccaatgatgttgaagaacttcctccactgtcaccagatatctgccttgttaacttctataccagcagtggtaagttaggtcttcaccaggtacgaaagatccacaatcttcaacgttatacaattatatttcaaagattagtattacaagtcttcctcaataaattactccaacaaaatcctcacctaggtcaaagcagcttttcctatggttattttcttcagagtttcttgtacttgcatttgtatagtataatgccttcaattcctctgcttttcaattgaaatgtttatattgctgtgatcctctttggtgattactaactggactgtgtgaatgtatcatttttacaggacaaagatgaaacgaaacccagccttcataagggattgcctgttgtttcattttcgctaggtgacactgcagaattcttgtatggtgacgtgaacgatgtggataaagcttcaaaggttgatctggaatctggtgatgttctcatatttggtggtaaatcaaggctcatattccatggggtttccagaatcaaaccaaaaacagcaccaaattggctgaccgatgaagcaaaacttcgacctgggcgtctgaacctcacattcaggcagcattagcttgccccgtattagatgtagagggaaccttgttctgttctgttgtagtagctcagtacccaccctattagcatgagttagctggtagtacattcgatctaactactggaaaactcgagaaggagtcagatcaaactatggaacatatatatatttagtgcaattgattttcctgtgattattatttttagatataatggaaatcaatccagatttgtgttgtagtttgaagaggtggcattgccagatttgtgttctaatgtaaattcctatcgtgaccactctttcaaaattaaaagacaatatataccaagccaatttaccaaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0816500, RefSeq:Os03g0816500