Os03g0816900

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Revision as of 13:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0816900| Description = Conserved hypothetical protein| Version = NM_001058232.1 GI:115456192 GeneID:4334569| Length = 5714 bp| Definition ...")
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Gene Name

Os03g0816900

Description

Conserved hypothetical protein

Version

NM_001058232.1 GI:115456192 GeneID:4334569

Length

5714 bp

Definition

Oryza sativa Japonica Group Os03g0816900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35108591..35114304

Sequence Coding Region

35108591..35108646,35109846..35110009,35110116..35110239,35110315..35110441,35110968..35111029
,35111119..35112170,35112314..35112703,35112814..35114304

Expression

GEO Profiles:Os03g0816900

Genome Context

<gbrowseImage1> name=NC_008396:35108591..35114304 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35108591..35114304 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggggtcgccatggcggggctcgtcggcgtgctccgccagctcggggatctcgcggagtttgcagctgaaatatttcacgacctgcatgaagatgtgatggccactgcttctagagggcatggtttaatgcttcggttgcgacagttagaggcagaatttcctgcagttgagaaggccattatatcccagtctgaccattcaaattacccacatgatgacggtgttgagtggcacacaaatcttcagattgatcaaaatatgattactcaaggagatatgccccgtttcattttggattcatatgaagaatgccgtggcccaccacgtttattcacattggataagtttgatgttgctggtgctggggcctccttgaaacgatactcagacccatctttcttcaagacagaacattcctcggacatgatagaaacggatgctgtgatagaaaagaagccccgcaaaattaagaaaaaagctttgcgttggaggaaaggagaaacactcgaatcattgcttatcgcaaactctgaatcccacactacctcaaaggatcgatcatctagaaaagttccaccaaggacaacaaagttgaaatacaggtatcctcgggagtctgatcataagaacattagcagaatatgcagagagcatctgcaagaaataatctcatcacaacaaaagatcttctccaactattcttcgaggtactaccatccaaagtttagattaactgagtcaagtgaaacggcatcctcatttggagaaatagataatttcagtgctcgtgctcaatcttctgctaaacttgaactgactaaggttgttccaataaacgagtttgataccaaggggatcgcacctacacacattaatggttcagattgcctggaggccctggaggcagatgataggcaattacaggctacacagcatgaacctgacaaagtggaagacgtctgtaagagatctcttgtggaacaaaatgccatgctctccaactctgataggatgcagtcagtgcaggaagagaatcttctatcagctatggtccctgctgatcaaaatgatgatcgctgcagacctgatgacactggtagtgatcaggagaacttcgtggacgctcttaataacatggaatcagagggtgaagcacatgctgagatgaaaataaaaaaggaccctggtgccaagatggaattggatgaattgaactttcaccgcgatgaaggtgaaaatgaacggcacacagagttttcagaactaggtcatgtaatagactcatcaccatggttgaatgattcatacaatggtggagaaccaaaccatgcaatatcttctaatacaaatttcagtggtgttgattgcaccaatgatgaagagccttctaatgatgttgacctaatggaaatggatgtcagctcatcatccagtgtattctctgacgacaatgatgtttttaggaccaatggtaatatgaatggttttcaacaataccaggaggcatctttgtccaatgatcatcatgctgtgattgcccatagttctgataaacagtcatcccagaaatctagtggcttggatggttcctctatcgaaagcaatgattttattgaaaaaccatttcactcattggaggatgataaaaactttgcaccagatggtacttctgtgatattgggcagacctaatgatgtatcacagtgtgaagaagaaattgaagttggaaatgctgatgattcattgctgcaacctaccatttccaatcaagaagtacataggtccaataaccaacttgaaggtgtggctatgcacgcaagcatttcatctggaaaagttgcatctttccctgatatggatcctggtatgtgcacaaaggacttggagttggacaatgttttagttcctaaagaaactgttgcaaatacacccccaacaggtttaggtactgatcatatccacgagcatgtggacgagcttgattcgggagttgcaccaatcaattcaagcattcagagtgattcgacatatgaatcagatgatgatgacatggctgaagatttgaactctctaccagaagatgatctatataagcatgacgtagaggacctatataagcatgttttagaggatgatggaataattgcgctaggaaaagggccttgttccactagggccaacatgcatcaagaggaccctatggaagtctctgatgtgcgtggggacttctctaatggtcaagagctcccagtactcactgaaactgcatctcctcaaggagaattagtaggaggaggagagctcccattactcactgaaactgcatctcctcaaggaggagaagaagatcttgcagatgaggtggttgtgatctcttctcgtgatctgaatgatgagaagaagccatcgttggctgaggtcccactagcttgcggtgatgcctctctgcttgacagtagtgcttcctgtttggaacatgacgagtctactgaaacaggagaaattgcaaaaagtgatgaagttctggtcaatgttgaggttgcagaagaatccatcactggcaggtttactgatgacatgacaccttttcaagaggatcttcctgatggtgccaaatatagtgaggatgcagaatttttggctaatcctagggtggacaactctaggcacgatgtgcaattacagtctagttccccttgcagggaagagttggaaacagtgaaagctccatgtgaaaatctttgtgcattagatgaatcaagagagcatatattcgagaaaagtgtgttgcagataaacaatcttccccagcatattgaaacaaaaaatacaggtgaagcatgtagtgacattgatgatattcaacatctttcagcattgcattgtccgaaaaatcctgtttgtcaagaggaattaccagacgagaccaatcttagtgctgacgttcagtatcattgtgatgtggagaagggtggtgcagtaatcttgaatagtaaaatggtggaagaacaaccagaaaatattgatttggtgagggagcctcgtgctcaagattcttttggtacaaacccattcatggatcctgggtacaaagcgaatcatgctctagctgatccgtgtcctagctatcaaccatgtttctctgaggaagaacaggattttatttcagaactattaatccctcatggtaatatgggaatcgaagacctgaatccggttccggttgctgattccctctgggaacctgcaactccacctgatgaggtgccattgccatcagaagttatgactgaggaggacttcagatcgttctgccatgagtaccacgagatggatctgacagcaacgcctgaaagtattgatgataaaccagcctcagattctaatgtcgtctcaagtagtttggtgaccagtgagtcggagttcctctattgtgtctctgcagtacggacaggagtggaccagg</cdnaseq>

Protein Sequence

<aaseq>GVAMAGLVGVLRQLGDLAEFAAEIFHDLHEDVMATASRGHGLML RLRQLEAEFPAVEKAIISQSDHSNYPHDDGVEWHTNLQIDQNMITQGDMPRFILDSYE ECRGPPRLFTLDKFDVAGAGASLKRYSDPSFFKTEHSSDMIETDAVIEKKPRKIKKKA LRWRKGETLESLLIANSESHTTSKDRSSRKVPPRTTKLKYRYPRESDHKNISRICREH LQEIISSQQKIFSNYSSRYYHPKFRLTESSETASSFGEIDNFSARAQSSAKLELTKVV PINEFDTKGIAPTHINGSDCLEALEADDRQLQATQHEPDKVEDVCKRSLVEQNAMLSN SDRMQSVQEENLLSAMVPADQNDDRCRPDDTGSDQENFVDALNNMESEGEAHAEMKIK KDPGAKMELDELNFHRDEGENERHTEFSELGHVIDSSPWLNDSYNGGEPNHAISSNTN FSGVDCTNDEEPSNDVDLMEMDVSSSSSVFSDDNDVFRTNGNMNGFQQYQEASLSNDH HAVIAHSSDKQSSQKSSGLDGSSIESNDFIEKPFHSLEDDKNFAPDGTSVILGRPNDV SQCEEEIEVGNADDSLLQPTISNQEVHRSNNQLEGVAMHASISSGKVASFPDMDPGMC TKDLELDNVLVPKETVANTPPTGLGTDHIHEHVDELDSGVAPINSSIQSDSTYESDDD DMAEDLNSLPEDDLYKHDVEDLYKHVLEDDGIIALGKGPCSTRANMHQEDPMEVSDVR GDFSNGQELPVLTETASPQGELVGGGELPLLTETASPQGGEEDLADEVVVISSRDLND EKKPSLAEVPLACGDASLLDSSASCLEHDESTETGEIAKSDEVLVNVEVAEESITGRF TDDMTPFQEDLPDGAKYSEDAEFLANPRVDNSRHDVQLQSSSPCREELETVKAPCENL CALDESREHIFEKSVLQINNLPQHIETKNTGEACSDIDDIQHLSALHCPKNPVCQEEL PDETNLSADVQYHCDVEKGGAVILNSKMVEEQPENIDLVREPRAQDSFGTNPFMDPGY KANHALADPCPSYQPCFSEEEQDFISELLIPHGNMGIEDLNPVPVADSLWEPATPPDE VPLPSEVMTEEDFRSFCHEYHEMDLTATPESIDDKPASDSNVVSSSLVTSESEFLYCV SAVRTGVDQ</aaseq>

Gene Sequence

<dnaseqindica>1..56#1256..1419#1526..1649#1725..1851#2378..2439#2529..3580#3724..4113#4224..5714#ggggtcgccatggcggggctcgtcggcgtgctccgccagctcggggatctcgcggagtgagtaccactggctttgttctttgttctttttcctgtgtggagagatgctagggttcgtgttagcgaatgagcgagtgagtgagtggcctcgctgtggagtttgcaagtttctggatgtgttttggacttatggtacggtcgattgagatgcggtgtgtcggtgtttgaatttctttttgtgtgtgttcatctgcttttgggatgtttctatgtactagataactcgatggttttggaaacactttaattcaactttgttgcgctcatttactcaatttcatggcatcagttggtcttagaatttgcttcacctgttgaatttgttacaaattttggggagaccacgagggatgtattctgagtccagtttgagcatgtaattggatttccaaatttgggttgagtcatgacgttttttttccttcgcaaatgggggttgtgagttacatttgcatccctttcgggctagcaagatgggccactgcagatattgctttttttagtcttcattgcacgctttgcggatttcaggatagttccttctttttcgtagtgcaattgatagctgttttagtgagtgaagagattagacattagactagagggtacattgttgtatttgggaatagaagagaaaattaacactgcagctaatttctgtaatttgggaagggtattcaaccttgttaattttgtctattgcggagtgttggaaatgctgcatagtttggattttgttagatgagggacaaagacatttcattgtgaacttcataatagagacgaaagttctagagagtcagatgagagcgcctttcatatatattttcttttgaaggaatagttgtagtgttttcaactcaattcggtcagtatctaagttcaacacttcgtaaaatttaaagcattttgttttttttgaaaagtttctattatataccgtgtcatcatttggaactggtgattgcaaaacttttgctggcttttgacaggctctttgttggtgaggtttgtcttataagctttgttgtatgacattttagttgtactgtctgcaacaaagatatgcctgttgttgattattgatgttttcttacagatgtagtaatattcctgttgaaacatcttgtcatacagaccatgccactattcctcttttacttaagaacttatgtatttccctcttggaaacaaaggtttgcagctgaaatatttcacgacctgcatgaagatgtgatggccactgcttctagagggcatggtttaatgcttcggttgcgacagttagaggcagaatttcctgcagttgagaaggccattatatcccagtctgaccattcaaattacccacatgatgacggttagttgaaatttgaaaaaaaacagagactatatgcctgccctgcttgttgttttctttatggtatggttcttacttgaaaaattcttggtacattctcttgtaggtgttgagtggcacacaaatcttcagattgatcaaaatatgattactcaaggagatatgccccgtttcattttggattcatatgaagaatgccgtggcccaccacgtttattcacattggataagtatggaaatgctgttttttcatgaggattaaccaaatacgttgttggtatttacacgctagggttgttcttcaggtttgatgttgctggtgctggggcctccttgaaacgatactcagacccatctttcttcaagacagaacattcctcggacatgatagaaacggatgctgtgatagaaaagaagccccgcaaaattaaggtaataattaatcctctattcttgcctgattatttttcacttcgcctgggagccttcaggaagtacacctaatagtttcgtgtgcatgaaatgaacgcgatgctagctgatgttgttttgtattaaatgtaatatttttggtagtcagcagtaataaatatctttgcctgacagtattggtttttgcaatggtaggacttactaaaacgttctttttgcatgtcaaataaaaatcgggtcagttaaattgcacatgaaaaaatacagcagatggaaaagaaaaaggcatgctgaccttattatttgaaatgtaaatccagacctgataaattttggaaggttgtccaagttaaaatgcccatttgtttagttgctaatatgttattaccacaacttgcgtgaaatataagcctgtcctgggaacaccccttgaccatttgtgttcattgttgtttctgaatatatatggatctttgtggttttagttttcttggatttacgaacttattgatacctttcatttcagaaaaaagctttgcgttggaggaaaggagaaacactcgaatcattgcttatcgcaaactctgagtaagtctagtgcattttgattggtcatgtacataataatcacaaaaatcatgtagtgatacaatatcattttgtgtaaaaatcggcagatcccacactacctcaaaggatcgatcatctagaaaagttccaccaaggacaacaaagttgaaatacaggtatcctcgggagtctgatcataagaacattagcagaatatgcagagagcatctgcaagaaataatctcatcacaacaaaagatcttctccaactattcttcgaggtactaccatccaaagtttagattaactgagtcaagtgaaacggcatcctcatttggagaaatagataatttcagtgctcgtgctcaatcttctgctaaacttgaactgactaaggttgttccaataaacgagtttgataccaaggggatcgcacctacacacattaatggttcagattgcctggaggccctggaggcagatgataggcaattacaggctacacagcatgaacctgacaaagtggaagacgtctgtaagagatctcttgtggaacaaaatgccatgctctccaactctgataggatgcagtcagtgcaggaagagaatcttctatcagctatggtccctgctgatcaaaatgatgatcgctgcagacctgatgacactggtagtgatcaggagaacttcgtggacgctcttaataacatggaatcagagggtgaagcacatgctgagatgaaaataaaaaaggaccctggtgccaagatggaattggatgaattgaactttcaccgcgatgaaggtgaaaatgaacggcacacagagttttcagaactaggtcatgtaatagactcatcaccatggttgaatgattcatacaatggtggagaaccaaaccatgcaatatcttctaatacaaatttcagtggtgttgattgcaccaatgatgaagagccttctaatgatgttgacctaatggaaatggatgtcagctcatcatccagtgtattctctgacgacaatgatgtttttaggaccaatggtaatatgaatggttttcaacaataccaggaggcatctttgtccaatgatcatcatgctgtgattgcccatagttctgataaacagtcatcccagaaatctagtggcttggatggtaattcttacattctaagtatctagttttttatacaaaaatatgatccctctgttggaggatgataaaaacatcattagttttttttatttattgttcttatatttatttttacctacatagttattgtcatgtgatgtcaggttcctctatcgaaagcaatgattttattgaaaaaccatttcactcattggaggatgataaaaactttgcaccagatggtacttctgtgatattgggcagacctaatgatgtatcacagtgtgaagaagaaattgaagttggaaatgctgatgattcattgctgcaacctaccatttccaatcaagaagtacataggtccaataaccaacttgaaggtgtggctatgcacgcaagcatttcatctggaaaagttgcatctttccctgatatggatcctggtatgtgcacaaaggacttggagttggacaatgttttagttcctaaagaaactgttgcaaatacacccccaacaggtttaggtactgatcatatccacgagcatgtggacggtaagccatttgtttgtttatctgtcttcaacatcttgcattttattatatttaaatgctttatttagttgggatatttcatttcattaaatgaaaccttattattgcagagcttgattcgggagttgcaccaatcaattcaagcattcagagtgattcgacatatgaatcagatgatgatgacatggctgaagatttgaactctctaccagaagatgatctatataagcatgacgtagaggacctatataagcatgttttagaggatgatggaataattgcgctaggaaaagggccttgttccactagggccaacatgcatcaagaggaccctatggaagtctctgatgtgcgtggggacttctctaatggtcaagagctcccagtactcactgaaactgcatctcctcaaggagaattagtaggaggaggagagctcccattactcactgaaactgcatctcctcaaggaggagaagaagatcttgcagatgaggtggttgtgatctcttctcgtgatctgaatgatgagaagaagccatcgttggctgaggtcccactagcttgcggtgatgcctctctgcttgacagtagtgcttcctgtttggaacatgacgagtctactgaaacaggagaaattgcaaaaagtgatgaagttctggtcaatgttgaggttgcagaagaatccatcactggcaggtttactgatgacatgacaccttttcaagaggatcttcctgatggtgccaaatatagtgaggatgcagaatttttggctaatcctagggtggacaactctaggcacgatgtgcaattacagtctagttccccttgcagggaagagttggaaacagtgaaagctccatgtgaaaatctttgtgcattagatgaatcaagagagcatatattcgagaaaagtgtgttgcagataaacaatcttccccagcatattgaaacaaaaaatacaggtgaagcatgtagtgacattgatgatattcaacatctttcagcattgcattgtccgaaaaatcctgtttgtcaagaggaattaccagacgagaccaatcttagtgctgacgttcagtatcattgtgatgtggagaagggtggtgcagtaatcttgaatagtaaaatggtggaagaacaaccagaaaatattgatttggtgagggagcctcgtgctcaagattcttttggtacaaacccattcatggatcctgggtacaaagcgaatcatgctctagctgatccgtgtcctagctatcaaccatgtttctctgaggaagaacaggattttatttcagaactattaatccctcatggtaatatgggaatcgaagacctgaatccggttccggttgctgattccctctgggaacctgcaactccacctgatgaggtgccattgccatcagaagttatgactgaggaggacttcagatcgttctgccatgagtaccacgagatggatctgacagcaacgcctgaaagtattgatgataaaccagcctcagattctaatgtcgtctcaagtagtttggtgaccagtgagtcggagttcctctattgtgtctctgcagtacggacaggagtggaccagg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0816900, RefSeq:Os03g0816900