Os10g0369000

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Revision as of 08:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0369000| Description = Similar to Glutamyl-tRNA synthetase| Version = NM_001070986.1 GI:115481715 GeneID:4348464| Length = 3971 bp| Defini...")
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Gene Name

Os10g0369000

Description

Similar to Glutamyl-tRNA synthetase

Version

NM_001070986.1 GI:115481715 GeneID:4348464

Length

3971 bp

Definition

Oryza sativa Japonica Group Os10g0369000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:11838374..11842344

Sequence Coding Region

11838794..11839012,11839309..11839773,11839863..11840938,11841030..11841183,11841272..11841362
,11841777..11841913

Expression

GEO Profiles:Os10g0369000

Genome Context

<gbrowseImage1> name=NC_008403:11838374..11842344 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:11838374..11842344 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgaagttatcgttttctcaggacagcccgccaatttccataatttctgctgctaaggttgccggtgtctccctgtccatagatcctagtcttgctgcgggctcagcacccgttctatgcttcagttctggagaatcactccgtggtatcaaccctattctcgagtacattgcccaatcctctccaagcctccatggccgagatgctattgagtctggacatgttgttgaatggcttgaatacgcccccaccttccttttaggatcagaatttgaggttgcctgctcatttgttgatggatacttgatgtctcggacctttctggttggtcatgttttaacgattgctgatatcactgtatggtcaaatctggctgggattggtcaacgatgggagagtctacggaaatcaaagaaataccaaaatcttgtccgttggttcaatggcatagattcagactacaaagacacattgaatgaggttatagctgcttatgttgggaaacgaggaattgggaaatcccctgcaccaaaccttaaggaaaaggttaatgactcaaaggatccttcagctccagaagttgatctccctggtgcaaaatttggagaggtgtgtgttcgctttgccccagagcccagtggttacctccatataggtcatgcaaaggctgcactcttgaacaagtactttgcagaaagatatcaaggtcgattaattgttcgatttgatgacactaacccttcaaaagaaagcaatgagtttgttgaaaacctcctaaaagatattgagaccctgggaatcaaatatgatgctgtcacatacacatctgattattttccaaagctaatggaaatggctgaaaaactgattaagcagggaaaagcatatgttgatgacacaccaaaggagcaaatgagaagtgagagaatggatggtgtggagtcaaagtgcagaaataatactgtggaggaaaatctgtctctatggaaagagatgataaatggttctgaaaggggtatgcaatgctgtgtgaggggtaaacttgacatgcaggatcctaacaagtcccttcgggatccagtttactaccgttgcaacactgatcctcaccatcgtattggttcaaagtacaaggtctatccaacttatgactttgcttgtccattcgttgatgcgctggagggagtgacccatgctcttcgttccagtgaatatcatgacaggaatgcacaatactatcgaattcttcaagatatggggatgaggagagtagaaatatatgagttcagcagattgaatatggtttatactcttcttagcaagcggaagctgctttggtttgtgcagaacaagaaggttgaagattggacagaccctcgtttccccactgttcaaggcatagtacgccgtggcttgaaagttgaggctttgatacaatttatactccaacagggtgcttcgaaaaatttgaatcttatggagtgggataaactctggacaatcaacaagaaaataattgacccagtttgtgcaaggcatactgctgtgttgaaagatcagcgtgtgatcttcaggcttactaatggtccagagaaatcatttgttcaaattttgccaaggcacaagaaatttgatggtgcaggaaagaaggcaacaaccttcacaaacagaatttggctagattatgctgatgcatctgcaattagcaagggtgaggaagttactctgatggactggggaaatgccatcattaaagaaatcaagatggagaatggagtaattactgaactgattggagaactacatcttgagggatctgtgaagacaacaaaattgaaggttacatggcttccggacatagatgatctggttcctctctcattggtggaatttgattacctgattagcaagaagaagcttgaggaggatgagaacttccttgacaacctgaacccatgcactcggaaagaaaccctggccctaggagacgcaaatatgaggaacctcctgcgtggggaggtcatacagcttgagaggaaaggctattacaggtgcgatgccccttttgtcagatcctcgaagccggtggttttgttcgctatccctgatggtcgacagcaggccagtttgaactag</cdnaseq>

Protein Sequence

<aaseq>MEAKLSFSQDSPPISIISAAKVAGVSLSIDPSLAAGSAPVLCFS SGESLRGINPILEYIAQSSPSLHGRDAIESGHVVEWLEYAPTFLLGSEFEVACSFVDG YLMSRTFLVGHVLTIADITVWSNLAGIGQRWESLRKSKKYQNLVRWFNGIDSDYKDTL NEVIAAYVGKRGIGKSPAPNLKEKVNDSKDPSAPEVDLPGAKFGEVCVRFAPEPSGYL HIGHAKAALLNKYFAERYQGRLIVRFDDTNPSKESNEFVENLLKDIETLGIKYDAVTY TSDYFPKLMEMAEKLIKQGKAYVDDTPKEQMRSERMDGVESKCRNNTVEENLSLWKEM INGSERGMQCCVRGKLDMQDPNKSLRDPVYYRCNTDPHHRIGSKYKVYPTYDFACPFV DALEGVTHALRSSEYHDRNAQYYRILQDMGMRRVEIYEFSRLNMVYTLLSKRKLLWFV QNKKVEDWTDPRFPTVQGIVRRGLKVEALIQFILQQGASKNLNLMEWDKLWTINKKII DPVCARHTAVLKDQRVIFRLTNGPEKSFVQILPRHKKFDGAGKKATTFTNRIWLDYAD ASAISKGEEVTLMDWGNAIIKEIKMENGVITELIGELHLEGSVKTTKLKVTWLPDIDD LVPLSLVEFDYLISKKKLEEDENFLDNLNPCTRKETLALGDANMRNLLRGEVIQLERK GYYRCDAPFVRSSKPVVLFAIPDGRQQASLN</aaseq>

Gene Sequence

<dnaseqindica>3333..3551#2572..3036#1407..2482#1162..1315#983..1073#432..568#atccgtcatcctgctgcttccgccgcgtccatcctccctgcttaggttagcccttcgcacatcctccgccgccgccgccgacgatccccatcaatcccgcgagcgagcggggccccgtcgttcgtcctcctgccgcttccgccgcatccatcctggttagcacctcctctttcccatctctctctctctctcgacccacgcacttcacttcttgtcgaatttgcgttaaccctagttagctcgctctgtgttctagaaatttgccttgatgtttggcatgttagatccgcccatggtagttgggggggggggtggagcgagtgcagactgatttgtttacaggatgatttgatagatggtgcgtaattttgatgtggctttctgatttccgctaatctcgtgttcgtatctgtgctactgcagtaggatcgatggaggcgaagttatcgttttctcaggacagcccgccaatttccataatttctgctgctaaggttgccggtgtctccctgtccatagatcctagtcttgctgcgggctcagcacccgttctatgcttcagttctgggtaagtggctgctcttctctgtatgtgtttttttttcttcttgtaggattgcataaggttctaggcatttgtttagctatctggagttgattagctataagtggagatgctactaatggcaaaaataaagatgttgttttctttttagcaaaatatgatgtttgaaacgttgtgcatcattactgaatgcaatttattgctgacttgtgttttccaagtggctattattatgatcattgttttgattatatttttcacttggctgtgctgtacttgttttttcacatagaagtacatgaccaattttagtttccaaattatcactttacttttacttgtcctttattttatcttttgggtttactcaccatctggaactgatagtttctcatgggaatctttgtttctacacagagaatcactccgtggtatcaaccctattctcgagtacattgcccaatcctctccaagcctccatggccgagatgctattgagtctggacatgtatgctgtgaccaagttcttgctaaaacatatttcataatctttgttttgttagtgttctaaattgctgttgttaatgaactggcaggttgttgaatggcttgaatacgcccccaccttccttttaggatcagaatttgaggttgcctgctcatttgttgatggatacttgatgtctcggacctttctggttggtcatgttttaacgattgctgatatcactgtatggtcaaatctggctggtgagccatgggcttctttcacgttctactctcaagcttctcctatgcttcataatgtgcgctaacaattgatgtatatcttctctttcagggattggtcaacgatgggagagtctacggaaatcaaagaaataccaaaatcttgtccgttggttcaatggcatagattcagactacaaagacacattgaatgaggttatagctgcttatgttgggaaacgaggaattgggaaatcccctgcaccaaaccttaaggaaaaggttaatgactcaaaggatccttcagctccagaagttgatctccctggtgcaaaatttggagaggtgtgtgttcgctttgccccagagcccagtggttacctccatataggtcatgcaaaggctgcactcttgaacaagtactttgcagaaagatatcaaggtcgattaattgttcgatttgatgacactaacccttcaaaagaaagcaatgagtttgttgaaaacctcctaaaagatattgagaccctgggaatcaaatatgatgctgtcacatacacatctgattattttccaaagctaatggaaatggctgaaaaactgattaagcagggaaaagcatatgttgatgacacaccaaaggagcaaatgagaagtgagagaatggatggtgtggagtcaaagtgcagaaataatactgtggaggaaaatctgtctctatggaaagagatgataaatggttctgaaaggggtatgcaatgctgtgtgaggggtaaacttgacatgcaggatcctaacaagtcccttcgggatccagtttactaccgttgcaacactgatcctcaccatcgtattggttcaaagtacaaggtctatccaacttatgactttgcttgtccattcgttgatgcgctggagggagtgacccatgctcttcgttccagtgaatatcatgacaggaatgcacaatactatcgaattcttcaagatatggggatgaggagagtagaaatatatgagttcagcagattgaatatggtttatactcttcttagcaagcggaagctgctttggtttgtgcagaacaagaaggttgaagattggacagaccctcgtttccccactgttcaaggcatagtacgccgtggcttgaaagttgaggctttgatacaatttatactccaacaggtattactatctgctagttagctcttgctttgtgttatttacatatgaaaatgatgaatcctgattgcatgcccatttctttgctgaagggtgcttcgaaaaatttgaatcttatggagtgggataaactctggacaatcaacaagaaaataattgacccagtttgtgcaaggcatactgctgtgttgaaagatcagcgtgtgatcttcaggcttactaatggtccagagaaatcatttgttcaaattttgccaaggcacaagaaatttgatggtgcaggaaagaaggcaacaaccttcacaaacagaatttggctagattatgctgatgcatctgcaattagcaagggtgaggaagttactctgatggactggggaaatgccatcattaaagaaatcaagatggagaatggagtaattactgaactgattggagaactacatcttgagggatctgtgaagacaacaaaattgaaggttacatggcttccggacatagatgatctggttcctctctcattggtggaatttgattacctgattagcaagaagaaggtgagttagcaattccagctagatgtagttagcatgaaagcttcttgcttgccttaactcaaatagtctgtcttttttacttgatattacatgctatcttttctctagtttctctatgtggatatcatattttcctgtacagtaatgttttttaaaaaaattgtggaactaaaccttctctcttttgtcatgcaaaatgtgaaccatttcttggttggagttagctcctatattactcgttcatttatcaatgagttaacactgaatgtcttctatgtttgtggccatgtgtacagcttgaggaggatgagaacttccttgacaacctgaacccatgcactcggaaagaaaccctggccctaggagacgcaaatatgaggaacctcctgcgtggggaggtcatacagcttgagaggaaaggctattacaggtgcgatgccccttttgtcagatcctcgaagccggtggttttgttcgctatccctgatggtcgacagcaggccagtttgaactaggcggcatgattctgatgagcttctcaagtcgttgagttgtcagagattcctgaatgctctactgaaacactcccatctcatactgtaatgtcgcttatgtgtcatgggtgatttgcgctaagttttggtgcacagtttaatgtttctcatgctccatgctccagttattaagaagacacaacatttcttagatggcaacgtgttagcttggcgatatcatactgccagatacaagcatctgaattttttgaagactaatatctgatattgcttggcatctgaattttttgaagactaataccgctctgggaaactgagttgaggacatttctggtccatattgcttgacatgcccttttatgtttccagttgttgattataactggtgaatctaatatcagtgttcgttggttttgtgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0369000, RefSeq:Os10g0369000