Os03g0817500

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Revision as of 13:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0817500| Description = Protein of unknown function DUF231, plant domain containing protein| Version = NM_001058236.1 GI:115456200 GeneID:433...")
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Gene Name

Os03g0817500

Description

Protein of unknown function DUF231, plant domain containing protein

Version

NM_001058236.1 GI:115456200 GeneID:4334573

Length

2924 bp

Definition

Oryza sativa Japonica Group Os03g0817500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35140592..35143515

Sequence Coding Region

35140710..35141274,35141800..35141996,35142103..35142274,35142950..35143437

Expression

GEO Profiles:Os03g0817500

Genome Context

<gbrowseImage1> name=NC_008396:35140592..35143515 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35140592..35143515 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgacgaccgggagcactccgccgcggaagaaccggagcaatgtcaccggcggcgagggggggagcctcgaggagtacgcgtggcgggcggcgggcgaggctgcagctgcgaagaaggcgacgagggcgtggggcgtcagcgtcagcctccggagccacttcagctcgctcgtgctgctcctgctgctcctcctcgtcgccctcgccgtctccgccaccaccaagaacggcgaccccgccgagacgcctcacgcgccgccgcttccaccgccggcgtcaataaagctcccgtcgtcgtcgtcgtccggcggcggcgagtgcgacctcttctccgggaggtgggtgtacgacgaggcggcgtacccgctgtacagggagagcgcgtgcagggtgatgtcggagcagtcggcgtgcgagaagtacgggaggacggacctccggtaccagcattggaggtggcaaccccatggctgcgaccttcctaggtttgacgcggagaagtttctggggaagctaaggaacaagcggctggtgttcgtgggcgactcgctgaaccgcaaccagtgggcttccatgctctgcctcatcgacaccggcgcccctgaactccacacctcaatcaactcctcccgatctctcaccaccttcaaaattcacgagtacaacgcgtcggtggatttctactggtcgccgttgctggtggagtccaactccgaccacccgctgcgccaccgcgtcgccgaccggaccgtccgcgccgcctccatcaacaagcacgccgcccactggaccaacgccgacgtcctcgtcttcaactcctacctctggtggcagcgtcccgccatgaaagtcctgtgggggtcgtttgacaatccggcggcggtggtggcggcggcggcggaggaaggggacgagtacgcggtgtccaaggtgattgacagcctgcgcgcgtacgagctggcggtgaggacgtgggccgactggatggagttccacgtcgaccgcgcccgcacccagctcttcttcatgaccatgtcgccgacgcacctccgctccgacgagtgggaggacgccgccgccgccgccgccggcggaaaccacgggtgctacggcgagacggagccgatcgcggcggaggagtacagggggacaagcgggacggacatggcgttcgcgagggcggtggaggcggaggcgcggcggctcggggagcgcagcgtggcggtgcggctgatcaacgtgacgcggctgtcggagcggcgcaaggacgcgcacccgtcggtgcaccgccggtactgggaccccgtcaccgacgagcagcggcgcaaccccagcagctacgccgactgcatccactggtgcctccccggcgtccccgacgtctggaaccagctcctctacgcacacatcgtctcatga</cdnaseq>

Protein Sequence

<aaseq>MTTTGSTPPRKNRSNVTGGEGGSLEEYAWRAAGEAAAAKKATRA WGVSVSLRSHFSSLVLLLLLLLVALAVSATTKNGDPAETPHAPPLPPPASIKLPSSSS SGGGECDLFSGRWVYDEAAYPLYRESACRVMSEQSACEKYGRTDLRYQHWRWQPHGCD LPRFDAEKFLGKLRNKRLVFVGDSLNRNQWASMLCLIDTGAPELHTSINSSRSLTTFK IHEYNASVDFYWSPLLVESNSDHPLRHRVADRTVRAASINKHAAHWTNADVLVFNSYL WWQRPAMKVLWGSFDNPAAVVAAAAEEGDEYAVSKVIDSLRAYELAVRTWADWMEFHV DRARTQLFFMTMSPTHLRSDEWEDAAAAAAGGNHGCYGETEPIAAEEYRGTSGTDMAF ARAVEAEARRLGERSVAVRLINVTRLSERRKDAHPSVHRRYWDPVTDEQRRNPSSYAD CIHWCLPGVPDVWNQLLYAHIVS</aaseq>

Gene Sequence

<dnaseqindica>2242..2806#1520..1716#1242..1413#79..566#gagcaaacaaaccgttcgcgcgcgccaccgatcgaattcacgactgaattagtttcttcttcgtcgtcgtcgtcgtcgatgacgacgaccgggagcactccgccgcggaagaaccggagcaatgtcaccggcggcgagggggggagcctcgaggagtacgcgtggcgggcggcgggcgaggctgcagctgcgaagaaggcgacgagggcgtggggcgtcagcgtcagcctccggagccacttcagctcgctcgtgctgctcctgctgctcctcctcgtcgccctcgccgtctccgccaccaccaagaacggcgaccccgccgagacgcctcacgcgccgccgcttccaccgccggcgtcaataaagctcccgtcgtcgtcgtcgtccggcggcggcgagtgcgacctcttctccgggaggtgggtgtacgacgaggcggcgtacccgctgtacagggagagcgcgtgcagggtgatgtcggagcagtcggcgtgcgagaagtacgggaggacggacctccggtaccagcattggaggtggcaaccccatggctgcgaccttcctaggtacgtatacgtatactatacgttgcacacatcgtacgtatacgtacgtagtgtgtacattgtagtagatcttggcgtgatgaacaaaaatagtctgccggttgttcatcaactggatcatgtagatgcatgttggtagctagaagcacactgcagtttcctaacaactcaaatttaattaagtacgtagagatcgagatgatgctcatttggggtaaattaaaatacacgtaacttaaaatatacttcccagaatacttgtaactttaagttttttttataattttgatctttcgtcttattcaagaaattatgaaattatttttttttatgatttgctttattataaaaagtactttaagtatcacttctccatttttatatttgcactaatttttcaaataaaatgaatggtcaaacgctacaagaaaaaagtcaaagcgactattaatctggaacggagatagtatgagtactagtttaattggttgtgtagtgactagtgagtcagtagaaataatctgaaacccctacagtcctagtactactcaagaactgtcattttcatgtttggataattatggccgaattcatttttttactactgtgtgtgtgtccaaatataaatcttaaacagactggacttaaactgcattatacgtactcaacttataggtttgacgcggagaagtttctggggaagctaaggaacaagcggctggtgttcgtgggcgactcgctgaaccgcaaccagtgggcttccatgctctgcctcatcgacaccggcgcccctgaactccacacctcaatcaactcctcccgatctctcaccaccttcaaaattcacgtaaatataactgaacgattccaaaatactactgaattttgcccatattatgtacgagtttcatatgcgtgatttgagacgataaaatacaatggcgcgcgtgcaggagtacaacgcgtcggtggatttctactggtcgccgttgctggtggagtccaactccgaccacccgctgcgccaccgcgtcgccgaccggaccgtccgcgccgcctccatcaacaagcacgccgcccactggaccaacgccgacgtcctcgtcttcaactcctacctctggtggcagcgtcccgccatgaaagtcctgtgagttttagctactctctccgtcttaaattataagacgttttgtctttggtcaaagttaaactactataattttaactaattttgtagaaaaaactagtaataattttaacataaaactaatatattatgaaaattatttaattatagatttaatgaaactattctgatgttgtaaatattactccatccgttctataatataagagattttgacattttatttgtactgtttgaccactcgtatggttaaaaaaattgtataaatataaaaaataaaaaattgtgcttaaagcactttagataataaaataagtcaaaaaaataaataataattctaaattttttaataagatgaatggtcaaacagtacaatcaagaacagagagaggactactttttttatatagagttagtcaaactttacagacacgaaagagagagagtagctagtagcaagcttgcatcgatccatggatgcagttgatcacctcgctctcgctgacggacgcgttcttgctgcaggtgggggtcgtttgacaatccggcggcggtggtggcggcggcggcggaggaaggggacgagtacgcggtgtccaaggtgattgacagcctgcgcgcgtacgagctggcggtgaggacgtgggccgactggatggagttccacgtcgaccgcgcccgcacccagctcttcttcatgaccatgtcgccgacgcacctccgctccgacgagtgggaggacgccgccgccgccgccgccggcggaaaccacgggtgctacggcgagacggagccgatcgcggcggaggagtacagggggacaagcgggacggacatggcgttcgcgagggcggtggaggcggaggcgcggcggctcggggagcgcagcgtggcggtgcggctgatcaacgtgacgcggctgtcggagcggcgcaaggacgcgcacccgtcggtgcaccgccggtactgggaccccgtcaccgacgagcagcggcgcaaccccagcagctacgccgactgcatccactggtgcctccccggcgtccccgacgtctggaaccagctcctctacgcacacatcgtctcatgagccatgagacctcatatcgcatctcctttttgatatatttttttctcttcttgtatgctttcaaaaaaacaaatgtaaatcctccaacaattgataagtattccgtcactttcaaaac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0817500, RefSeq:Os03g0817500